Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS21965 and ABID97_RS21970 are separated by 37 nucleotides ABID97_RS21970 and ABID97_RS21975 are separated by 1 nucleotides ABID97_RS21975 and ABID97_RS21980 overlap by 7 nucleotides
ABID97_RS21965: ABID97_RS21965 - ABC transporter substrate-binding protein, at 4,544,073 to 4,545,053
_RS21965
ABID97_RS21970: ABID97_RS21970 - cytochrome c, at 4,545,091 to 4,546,251
_RS21970
ABID97_RS21975: ABID97_RS21975 - ABC transporter ATP-binding protein, at 4,546,253 to 4,547,041
_RS21975
ABID97_RS21980: ABID97_RS21980 - ABC transporter permease, at 4,547,035 to 4,548,117
_RS21980
Position (kb) 4545
4546
4547 Strain fitness (log2 ratio) -1
0
1 at 4544.287 kb on + strand, within ABID97_RS21965 at 4544.395 kb on + strand, within ABID97_RS21965 at 4544.702 kb on - strand, within ABID97_RS21965 at 4545.602 kb on + strand, within ABID97_RS21970 at 4545.603 kb on - strand, within ABID97_RS21970 at 4545.840 kb on - strand, within ABID97_RS21970 at 4547.141 kb on + strand at 4547.142 kb on - strand at 4547.142 kb on - strand at 4547.184 kb on - strand, within ABID97_RS21980
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 4,544,287 + ABID97_RS21965 0.22 +0.4 4,544,395 + ABID97_RS21965 0.33 -0.2 4,544,702 - ABID97_RS21965 0.64 -0.0 4,545,602 + ABID97_RS21970 0.44 +1.2 4,545,603 - ABID97_RS21970 0.44 -0.1 4,545,840 - ABID97_RS21970 0.65 +0.7 4,547,141 + +0.4 4,547,142 - +0.4 4,547,142 - -0.4 4,547,184 - ABID97_RS21980 0.14 +0.0
Or see this region's nucleotide sequence