Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS20785 and ABID97_RS20790 are separated by 4 nucleotides ABID97_RS20790 and ABID97_RS20795 are separated by 100 nucleotides ABID97_RS20795 and ABID97_RS20800 are separated by 15 nucleotides ABID97_RS20800 and ABID97_RS20805 are separated by 12 nucleotides
ABID97_RS20785: ABID97_RS20785 - hypothetical protein, at 4,295,370 to 4,295,984
_RS20785
ABID97_RS20790: ABID97_RS20790 - 2OG-Fe(II) oxygenase, at 4,295,989 to 4,296,669
_RS20790
ABID97_RS20795: ABID97_RS20795 - PadR family transcriptional regulator, at 4,296,770 to 4,297,384
_RS20795
ABID97_RS20800: ABID97_RS20800 - siderophore-interacting protein, at 4,297,400 to 4,298,242
_RS20800
ABID97_RS20805: ABID97_RS20805 - magnesium/cobalt transporter CorA, at 4,298,255 to 4,299,232
_RS20805
Position (kb) 4296
4297
4298 Strain fitness (log2 ratio) -1
0
1 at 4295.829 kb on + strand, within ABID97_RS20785 at 4295.830 kb on - strand, within ABID97_RS20785 at 4295.830 kb on - strand, within ABID97_RS20785 at 4295.835 kb on + strand, within ABID97_RS20785 at 4295.835 kb on + strand, within ABID97_RS20785 at 4295.836 kb on - strand, within ABID97_RS20785 at 4295.836 kb on - strand, within ABID97_RS20785 at 4295.836 kb on - strand, within ABID97_RS20785 at 4295.836 kb on - strand, within ABID97_RS20785 at 4296.344 kb on - strand, within ABID97_RS20790 at 4296.538 kb on + strand, within ABID97_RS20790 at 4296.538 kb on + strand, within ABID97_RS20790 at 4296.538 kb on + strand, within ABID97_RS20790 at 4297.130 kb on + strand, within ABID97_RS20795 at 4297.382 kb on + strand at 4297.382 kb on + strand at 4297.383 kb on - strand at 4297.383 kb on - strand at 4298.241 kb on - strand at 4298.287 kb on - strand at 4298.292 kb on + strand at 4298.292 kb on + strand at 4298.292 kb on + strand at 4298.293 kb on - strand at 4298.293 kb on - strand at 4298.293 kb on - strand at 4298.293 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 4,295,829 + ABID97_RS20785 0.75 +0.1 4,295,830 - ABID97_RS20785 0.75 -0.2 4,295,830 - ABID97_RS20785 0.75 -0.4 4,295,835 + ABID97_RS20785 0.76 -0.4 4,295,835 + ABID97_RS20785 0.76 +0.2 4,295,836 - ABID97_RS20785 0.76 +0.1 4,295,836 - ABID97_RS20785 0.76 +0.3 4,295,836 - ABID97_RS20785 0.76 +0.6 4,295,836 - ABID97_RS20785 0.76 -1.0 4,296,344 - ABID97_RS20790 0.52 +0.3 4,296,538 + ABID97_RS20790 0.81 +0.9 4,296,538 + ABID97_RS20790 0.81 -0.3 4,296,538 + ABID97_RS20790 0.81 +0.4 4,297,130 + ABID97_RS20795 0.59 -1.2 4,297,382 + +1.0 4,297,382 + +0.0 4,297,383 - -0.7 4,297,383 - -1.3 4,298,241 - -0.4 4,298,287 - -0.4 4,298,292 + -0.8 4,298,292 + -0.1 4,298,292 + -0.7 4,298,293 - -0.1 4,298,293 - +0.5 4,298,293 - -0.7 4,298,293 - -0.1
Or see this region's nucleotide sequence