Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS20285 and ABID97_RS20290 overlap by 15 nucleotides ABID97_RS20290 and ABID97_RS20295 overlap by 4 nucleotides
ABID97_RS20285: ABID97_RS20285 - tRNA epoxyqueuosine(34) reductase QueG, at 4,186,510 to 4,187,616
_RS20285
ABID97_RS20290: ABID97_RS20290 - tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE, at 4,187,602 to 4,188,111
_RS20290
ABID97_RS20295: ABID97_RS20295 - N-acetylmuramoyl-L-alanine amidase, at 4,188,108 to 4,189,688
_RS20295
Position (kb) 4187
4188
4189 Strain fitness (log2 ratio) -1
0
1
2 at 4186.730 kb on + strand, within ABID97_RS20285 at 4186.874 kb on + strand, within ABID97_RS20285 at 4186.875 kb on - strand, within ABID97_RS20285 at 4186.875 kb on - strand, within ABID97_RS20285 at 4187.072 kb on + strand, within ABID97_RS20285 at 4187.072 kb on + strand, within ABID97_RS20285 at 4187.072 kb on + strand, within ABID97_RS20285 at 4187.072 kb on + strand, within ABID97_RS20285 at 4187.073 kb on - strand, within ABID97_RS20285 at 4187.073 kb on - strand, within ABID97_RS20285 at 4187.073 kb on - strand, within ABID97_RS20285 at 4187.073 kb on - strand, within ABID97_RS20285 at 4187.073 kb on - strand, within ABID97_RS20285 at 4187.073 kb on - strand, within ABID97_RS20285 at 4187.073 kb on - strand, within ABID97_RS20285 at 4187.276 kb on + strand, within ABID97_RS20285 at 4187.276 kb on + strand, within ABID97_RS20285 at 4187.276 kb on + strand, within ABID97_RS20285 at 4187.277 kb on - strand, within ABID97_RS20285 at 4187.277 kb on - strand, within ABID97_RS20285 at 4187.295 kb on - strand, within ABID97_RS20285 at 4187.295 kb on - strand, within ABID97_RS20285 at 4187.367 kb on + strand, within ABID97_RS20285 at 4187.382 kb on - strand, within ABID97_RS20285 at 4187.382 kb on - strand, within ABID97_RS20285 at 4187.382 kb on - strand, within ABID97_RS20285 at 4187.382 kb on - strand, within ABID97_RS20285 at 4187.465 kb on + strand, within ABID97_RS20285 at 4187.465 kb on + strand, within ABID97_RS20285 at 4187.466 kb on - strand, within ABID97_RS20285 at 4187.466 kb on - strand, within ABID97_RS20285 at 4187.466 kb on - strand, within ABID97_RS20285 at 4187.466 kb on - strand, within ABID97_RS20285 at 4187.466 kb on - strand, within ABID97_RS20285 at 4187.586 kb on + strand at 4187.586 kb on + strand at 4187.587 kb on - strand at 4187.627 kb on + strand at 4188.217 kb on + strand at 4188.217 kb on + strand at 4188.234 kb on + strand at 4188.235 kb on - strand at 4188.384 kb on + strand, within ABID97_RS20295 at 4188.384 kb on + strand, within ABID97_RS20295 at 4188.384 kb on + strand, within ABID97_RS20295 at 4188.384 kb on + strand, within ABID97_RS20295
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 4,186,730 + ABID97_RS20285 0.20 -0.3 4,186,874 + ABID97_RS20285 0.33 -0.3 4,186,875 - ABID97_RS20285 0.33 -0.2 4,186,875 - ABID97_RS20285 0.33 -0.2 4,187,072 + ABID97_RS20285 0.51 +1.1 4,187,072 + ABID97_RS20285 0.51 +1.3 4,187,072 + ABID97_RS20285 0.51 +1.5 4,187,072 + ABID97_RS20285 0.51 +0.8 4,187,073 - ABID97_RS20285 0.51 +1.6 4,187,073 - ABID97_RS20285 0.51 -0.4 4,187,073 - ABID97_RS20285 0.51 +0.9 4,187,073 - ABID97_RS20285 0.51 +1.3 4,187,073 - ABID97_RS20285 0.51 -0.4 4,187,073 - ABID97_RS20285 0.51 -1.7 4,187,073 - ABID97_RS20285 0.51 -0.4 4,187,276 + ABID97_RS20285 0.69 +2.3 4,187,276 + ABID97_RS20285 0.69 +2.4 4,187,276 + ABID97_RS20285 0.69 +1.5 4,187,277 - ABID97_RS20285 0.69 -0.0 4,187,277 - ABID97_RS20285 0.69 -0.0 4,187,295 - ABID97_RS20285 0.71 -1.3 4,187,295 - ABID97_RS20285 0.71 +0.4 4,187,367 + ABID97_RS20285 0.77 +0.7 4,187,382 - ABID97_RS20285 0.79 +0.3 4,187,382 - ABID97_RS20285 0.79 -0.0 4,187,382 - ABID97_RS20285 0.79 -0.1 4,187,382 - ABID97_RS20285 0.79 +0.2 4,187,465 + ABID97_RS20285 0.86 +0.4 4,187,465 + ABID97_RS20285 0.86 +1.3 4,187,466 - ABID97_RS20285 0.86 -0.4 4,187,466 - ABID97_RS20285 0.86 -0.0 4,187,466 - ABID97_RS20285 0.86 +0.5 4,187,466 - ABID97_RS20285 0.86 -0.2 4,187,466 - ABID97_RS20285 0.86 +0.2 4,187,586 + +0.0 4,187,586 + +0.0 4,187,587 - +1.0 4,187,627 + -0.0 4,188,217 + -0.6 4,188,217 + +0.3 4,188,234 + +0.5 4,188,235 - -0.8 4,188,384 + ABID97_RS20295 0.17 -0.2 4,188,384 + ABID97_RS20295 0.17 +0.6 4,188,384 + ABID97_RS20295 0.17 +0.3 4,188,384 + ABID97_RS20295 0.17 -0.3
Or see this region's nucleotide sequence