Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS03695 and ABID97_RS03700 are separated by 1 nucleotides ABID97_RS03700 and ABID97_RS03705 are separated by 18 nucleotides ABID97_RS03705 and ABID97_RS03710 are separated by 32 nucleotides
ABID97_RS03695: ABID97_RS03695 - 2-dehydropantoate 2-reductase, at 760,339 to 761,316
_RS03695
ABID97_RS03700: ABID97_RS03700 - class II aldolase/adducin family protein, at 761,318 to 762,112
_RS03700
ABID97_RS03705: ABID97_RS03705 - Bug family tripartite tricarboxylate transporter substrate binding protein, at 762,131 to 763,120
_RS03705
ABID97_RS03710: ABID97_RS03710 - dihydroxy-acid dehydratase, at 763,153 to 764,889
_RS03710
Position (kb) 762
763
764 Strain fitness (log2 ratio) -2
-1
0
1 at 761.300 kb on + strand at 761.300 kb on + strand at 761.328 kb on + strand at 761.328 kb on + strand at 761.328 kb on + strand at 761.656 kb on - strand, within ABID97_RS03700 at 761.656 kb on - strand, within ABID97_RS03700 at 761.686 kb on - strand, within ABID97_RS03700 at 761.895 kb on + strand, within ABID97_RS03700 at 761.895 kb on + strand, within ABID97_RS03700 at 761.896 kb on - strand, within ABID97_RS03700 at 761.976 kb on + strand, within ABID97_RS03700 at 761.976 kb on + strand, within ABID97_RS03700 at 762.802 kb on - strand, within ABID97_RS03705 at 762.802 kb on - strand, within ABID97_RS03705 at 762.879 kb on + strand, within ABID97_RS03705 at 762.880 kb on - strand, within ABID97_RS03705 at 762.880 kb on - strand, within ABID97_RS03705 at 762.880 kb on - strand, within ABID97_RS03705 at 762.880 kb on - strand, within ABID97_RS03705 at 762.939 kb on + strand, within ABID97_RS03705 at 762.940 kb on - strand, within ABID97_RS03705 at 763.136 kb on + strand at 763.136 kb on + strand at 763.137 kb on - strand at 763.898 kb on + strand, within ABID97_RS03710 at 763.898 kb on + strand, within ABID97_RS03710 at 763.899 kb on - strand, within ABID97_RS03710 at 763.919 kb on + strand, within ABID97_RS03710
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 761,300 + +0.0 761,300 + -2.0 761,328 + -0.3 761,328 + +0.6 761,328 + -0.7 761,656 - ABID97_RS03700 0.43 -0.0 761,656 - ABID97_RS03700 0.43 +0.2 761,686 - ABID97_RS03700 0.46 +0.6 761,895 + ABID97_RS03700 0.73 -0.2 761,895 + ABID97_RS03700 0.73 +0.6 761,896 - ABID97_RS03700 0.73 -0.9 761,976 + ABID97_RS03700 0.83 +0.1 761,976 + ABID97_RS03700 0.83 +0.2 762,802 - ABID97_RS03705 0.68 -0.3 762,802 - ABID97_RS03705 0.68 -0.0 762,879 + ABID97_RS03705 0.76 +0.3 762,880 - ABID97_RS03705 0.76 +0.7 762,880 - ABID97_RS03705 0.76 +0.5 762,880 - ABID97_RS03705 0.76 +1.1 762,880 - ABID97_RS03705 0.76 -0.3 762,939 + ABID97_RS03705 0.82 -0.0 762,940 - ABID97_RS03705 0.82 +1.0 763,136 + -0.2 763,136 + -1.9 763,137 - -0.2 763,898 + ABID97_RS03710 0.43 +0.1 763,898 + ABID97_RS03710 0.43 -0.0 763,899 - ABID97_RS03710 0.43 +0.2 763,919 + ABID97_RS03710 0.44 -0.2
Or see this region's nucleotide sequence