Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS02465 and ABID97_RS02470 are separated by 76 nucleotides ABID97_RS02470 and ABID97_RS02475 are separated by 55 nucleotides
ABID97_RS02465: ABID97_RS02465 - esterase-like activity of phytase family protein, at 494,541 to 495,893
_RS02465
ABID97_RS02470: ABID97_RS02470 - penicillin-binding protein 1C, at 495,970 to 498,273
_RS02470
ABID97_RS02475: ABID97_RS02475 - alpha-2-macroglobulin, at 498,329 to 504,334
_RS02475
Position (kb) 495
496
497
498
499 Strain fitness (log2 ratio) -2
-1
0
1 at 495.080 kb on - strand, within ABID97_RS02465 at 495.124 kb on + strand, within ABID97_RS02465 at 495.124 kb on + strand, within ABID97_RS02465 at 495.125 kb on - strand, within ABID97_RS02465 at 495.508 kb on + strand, within ABID97_RS02465 at 495.508 kb on + strand, within ABID97_RS02465 at 495.509 kb on - strand, within ABID97_RS02465 at 495.509 kb on - strand, within ABID97_RS02465 at 495.520 kb on + strand, within ABID97_RS02465 at 495.520 kb on + strand, within ABID97_RS02465 at 495.521 kb on - strand, within ABID97_RS02465 at 496.040 kb on + strand at 496.040 kb on + strand at 496.041 kb on - strand at 496.130 kb on + strand at 496.130 kb on + strand at 496.131 kb on - strand at 496.412 kb on - strand, within ABID97_RS02470 at 496.889 kb on + strand, within ABID97_RS02470 at 496.931 kb on + strand, within ABID97_RS02470 at 496.931 kb on + strand, within ABID97_RS02470 at 496.932 kb on - strand, within ABID97_RS02470 at 497.042 kb on + strand, within ABID97_RS02470 at 497.043 kb on - strand, within ABID97_RS02470 at 497.162 kb on + strand, within ABID97_RS02470 at 497.237 kb on + strand, within ABID97_RS02470 at 497.237 kb on + strand, within ABID97_RS02470 at 497.237 kb on + strand, within ABID97_RS02470 at 497.238 kb on - strand, within ABID97_RS02470 at 497.238 kb on - strand, within ABID97_RS02470 at 497.417 kb on + strand, within ABID97_RS02470 at 497.418 kb on - strand, within ABID97_RS02470 at 497.757 kb on - strand, within ABID97_RS02470 at 497.757 kb on - strand, within ABID97_RS02470 at 497.816 kb on + strand, within ABID97_RS02470 at 497.817 kb on - strand, within ABID97_RS02470 at 497.916 kb on - strand, within ABID97_RS02470 at 498.047 kb on + strand at 498.047 kb on + strand at 498.048 kb on - strand at 498.158 kb on + strand at 498.450 kb on + strand at 498.451 kb on - strand at 498.487 kb on - strand at 498.487 kb on - strand at 498.520 kb on - strand at 498.520 kb on - strand at 498.832 kb on - strand at 498.832 kb on - strand at 498.835 kb on - strand at 499.005 kb on + strand, within ABID97_RS02475 at 499.173 kb on + strand, within ABID97_RS02475 at 499.173 kb on + strand, within ABID97_RS02475 at 499.174 kb on - strand, within ABID97_RS02475
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 495,080 - ABID97_RS02465 0.40 +0.0 495,124 + ABID97_RS02465 0.43 +0.0 495,124 + ABID97_RS02465 0.43 +0.0 495,125 - ABID97_RS02465 0.43 +0.0 495,508 + ABID97_RS02465 0.71 -0.5 495,508 + ABID97_RS02465 0.71 +0.2 495,509 - ABID97_RS02465 0.72 -0.9 495,509 - ABID97_RS02465 0.72 +0.3 495,520 + ABID97_RS02465 0.72 -0.1 495,520 + ABID97_RS02465 0.72 -0.0 495,521 - ABID97_RS02465 0.72 +0.4 496,040 + -0.1 496,040 + -1.1 496,041 - -0.3 496,130 + -0.1 496,130 + +0.4 496,131 - -0.4 496,412 - ABID97_RS02470 0.19 +0.5 496,889 + ABID97_RS02470 0.40 +0.1 496,931 + ABID97_RS02470 0.42 -0.7 496,931 + ABID97_RS02470 0.42 -0.4 496,932 - ABID97_RS02470 0.42 -0.5 497,042 + ABID97_RS02470 0.47 -0.3 497,043 - ABID97_RS02470 0.47 -0.2 497,162 + ABID97_RS02470 0.52 +0.5 497,237 + ABID97_RS02470 0.55 -0.3 497,237 + ABID97_RS02470 0.55 -0.3 497,237 + ABID97_RS02470 0.55 -0.2 497,238 - ABID97_RS02470 0.55 -0.4 497,238 - ABID97_RS02470 0.55 -0.2 497,417 + ABID97_RS02470 0.63 -0.1 497,418 - ABID97_RS02470 0.63 +0.1 497,757 - ABID97_RS02470 0.78 -0.7 497,757 - ABID97_RS02470 0.78 -1.0 497,816 + ABID97_RS02470 0.80 +0.1 497,817 - ABID97_RS02470 0.80 +0.0 497,916 - ABID97_RS02470 0.84 -0.6 498,047 + -0.0 498,047 + -0.1 498,048 - -0.7 498,158 + -0.2 498,450 + -1.2 498,451 - -0.4 498,487 - -0.1 498,487 - +0.4 498,520 - +1.1 498,520 - -0.5 498,832 - -1.1 498,832 - -0.2 498,835 - +0.1 499,005 + ABID97_RS02475 0.11 -1.9 499,173 + ABID97_RS02475 0.14 +0.3 499,173 + ABID97_RS02475 0.14 -0.4 499,174 - ABID97_RS02475 0.14 +0.2
Or see this region's nucleotide sequence