Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS01550 and ABID97_RS01555 overlap by 4 nucleotides ABID97_RS01555 and ABID97_RS01560 are separated by 25 nucleotides ABID97_RS01560 and ABID97_RS01565 are separated by 69 nucleotides
ABID97_RS01550: ABID97_RS01550 - esterase-like activity of phytase family protein, at 304,387 to 305,568
_RS01550
ABID97_RS01555: ABID97_RS01555 - pyrroline-5-carboxylate reductase, at 305,565 to 306,422
_RS01555
ABID97_RS01560: ABID97_RS01560 - 4-hydroxybenzoate octaprenyltransferase, at 306,448 to 307,308
_RS01560
ABID97_RS01565: ABID97_RS01565 - DNA starvation/stationary phase protection protein, at 307,378 to 307,950
_RS01565
Position (kb) 305
306
307 Strain fitness (log2 ratio) -1
0
1 at 304.572 kb on + strand, within ABID97_RS01550 at 304.572 kb on + strand, within ABID97_RS01550 at 304.572 kb on + strand, within ABID97_RS01550 at 304.573 kb on - strand, within ABID97_RS01550 at 304.573 kb on - strand, within ABID97_RS01550 at 304.574 kb on + strand, within ABID97_RS01550 at 304.574 kb on + strand, within ABID97_RS01550 at 305.164 kb on + strand, within ABID97_RS01550 at 305.164 kb on + strand, within ABID97_RS01550 at 305.164 kb on + strand, within ABID97_RS01550 at 305.164 kb on + strand, within ABID97_RS01550 at 305.165 kb on - strand, within ABID97_RS01550 at 305.279 kb on - strand, within ABID97_RS01550 at 305.279 kb on - strand, within ABID97_RS01550 at 305.551 kb on + strand at 305.551 kb on + strand at 305.552 kb on - strand at 305.552 kb on - strand at 305.552 kb on - strand at 306.450 kb on - strand at 306.450 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 304,572 + ABID97_RS01550 0.16 +0.0 304,572 + ABID97_RS01550 0.16 -0.4 304,572 + ABID97_RS01550 0.16 +0.2 304,573 - ABID97_RS01550 0.16 -0.2 304,573 - ABID97_RS01550 0.16 +0.1 304,574 + ABID97_RS01550 0.16 +0.0 304,574 + ABID97_RS01550 0.16 -0.6 305,164 + ABID97_RS01550 0.66 -0.9 305,164 + ABID97_RS01550 0.66 +1.4 305,164 + ABID97_RS01550 0.66 -0.7 305,164 + ABID97_RS01550 0.66 +0.0 305,165 - ABID97_RS01550 0.66 +0.2 305,279 - ABID97_RS01550 0.75 -0.4 305,279 - ABID97_RS01550 0.75 +0.3 305,551 + -0.1 305,551 + +0.7 305,552 - -0.0 305,552 - -0.2 305,552 - -0.1 306,450 - +1.2 306,450 - +0.9
Or see this region's nucleotide sequence