Experiment: dichromate 20 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_24895 and IAI46_24900 are separated by 5 nucleotides IAI46_24900 and IAI46_24905 overlap by 4 nucleotides IAI46_24905 and IAI46_24910 are separated by 58 nucleotides
IAI46_24895: IAI46_24895 - bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase, at 5,309,525 to 5,311,636
_24895
IAI46_24900: IAI46_24900 - tRNA (guanosine(18)-2'-O)-methyltransferase TrmH, at 5,311,642 to 5,312,337
_24900
IAI46_24905: IAI46_24905 - ATP-dependent DNA helicase RecG, at 5,312,334 to 5,314,415
_24905
IAI46_24910: IAI46_24910 - sodium/glutamate symporter, at 5,314,474 to 5,315,685
_24910
Position (kb) 5312
5313
5314
5315 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5311.371 kb on + strand, within IAI46_24895 at 5311.372 kb on - strand, within IAI46_24895 at 5311.486 kb on + strand at 5311.486 kb on + strand at 5311.486 kb on + strand at 5311.487 kb on - strand at 5311.529 kb on - strand at 5311.576 kb on + strand at 5311.577 kb on - strand at 5311.577 kb on - strand at 5311.579 kb on + strand at 5311.634 kb on + strand at 5311.641 kb on + strand at 5311.642 kb on - strand at 5311.642 kb on - strand at 5311.642 kb on - strand at 5311.657 kb on + strand at 5311.658 kb on - strand at 5311.803 kb on + strand, within IAI46_24900 at 5311.803 kb on + strand, within IAI46_24900 at 5311.889 kb on + strand, within IAI46_24900 at 5311.889 kb on + strand, within IAI46_24900 at 5311.929 kb on + strand, within IAI46_24900 at 5311.969 kb on + strand, within IAI46_24900 at 5311.970 kb on - strand, within IAI46_24900 at 5311.980 kb on + strand, within IAI46_24900 at 5311.980 kb on + strand, within IAI46_24900 at 5311.981 kb on - strand, within IAI46_24900 at 5311.981 kb on - strand, within IAI46_24900 at 5312.055 kb on + strand, within IAI46_24900 at 5312.055 kb on + strand, within IAI46_24900 at 5312.056 kb on - strand, within IAI46_24900 at 5312.056 kb on - strand, within IAI46_24900 at 5312.056 kb on - strand, within IAI46_24900 at 5312.070 kb on + strand, within IAI46_24900 at 5312.117 kb on - strand, within IAI46_24900 at 5312.169 kb on + strand, within IAI46_24900 at 5312.169 kb on + strand, within IAI46_24900 at 5312.170 kb on - strand, within IAI46_24900 at 5312.170 kb on - strand, within IAI46_24900 at 5312.170 kb on - strand, within IAI46_24900 at 5312.170 kb on - strand, within IAI46_24900 at 5312.170 kb on - strand, within IAI46_24900 at 5312.369 kb on + strand at 5312.464 kb on - strand at 5312.491 kb on + strand at 5312.575 kb on + strand, within IAI46_24905 at 5312.575 kb on + strand, within IAI46_24905 at 5312.576 kb on - strand, within IAI46_24905 at 5312.679 kb on + strand, within IAI46_24905 at 5312.680 kb on - strand, within IAI46_24905 at 5312.806 kb on + strand, within IAI46_24905 at 5312.806 kb on + strand, within IAI46_24905 at 5312.807 kb on - strand, within IAI46_24905 at 5312.858 kb on + strand, within IAI46_24905 at 5313.029 kb on + strand, within IAI46_24905 at 5313.069 kb on + strand, within IAI46_24905 at 5313.104 kb on + strand, within IAI46_24905 at 5313.161 kb on - strand, within IAI46_24905 at 5313.161 kb on - strand, within IAI46_24905 at 5313.371 kb on - strand, within IAI46_24905 at 5313.746 kb on + strand, within IAI46_24905 at 5313.746 kb on + strand, within IAI46_24905 at 5313.804 kb on - strand, within IAI46_24905 at 5313.951 kb on - strand, within IAI46_24905 at 5314.125 kb on + strand, within IAI46_24905 at 5314.125 kb on + strand, within IAI46_24905 at 5314.126 kb on - strand, within IAI46_24905 at 5314.182 kb on - strand, within IAI46_24905 at 5314.316 kb on - strand at 5314.316 kb on - strand at 5314.336 kb on + strand at 5314.337 kb on - strand at 5314.337 kb on - strand at 5314.337 kb on - strand at 5314.337 kb on - strand at 5314.337 kb on - strand at 5314.337 kb on - strand at 5314.401 kb on + strand at 5314.402 kb on - strand at 5314.461 kb on + strand at 5314.462 kb on - strand at 5314.471 kb on + strand at 5314.472 kb on - strand at 5314.508 kb on + strand at 5314.508 kb on + strand at 5314.509 kb on - strand at 5314.509 kb on - strand at 5314.509 kb on - strand at 5314.509 kb on - strand at 5314.515 kb on + strand at 5314.515 kb on + strand at 5314.516 kb on - strand at 5314.542 kb on + strand at 5314.560 kb on + strand at 5314.560 kb on + strand at 5314.560 kb on + strand at 5314.561 kb on - strand at 5314.561 kb on - strand at 5314.605 kb on + strand, within IAI46_24910 at 5314.689 kb on - strand, within IAI46_24910 at 5314.710 kb on - strand, within IAI46_24910 at 5314.728 kb on - strand, within IAI46_24910 at 5314.883 kb on + strand, within IAI46_24910 at 5314.883 kb on + strand, within IAI46_24910 at 5314.883 kb on + strand, within IAI46_24910 at 5314.884 kb on - strand, within IAI46_24910 at 5314.884 kb on - strand, within IAI46_24910 at 5314.884 kb on - strand, within IAI46_24910 at 5314.884 kb on - strand, within IAI46_24910 at 5314.952 kb on - strand, within IAI46_24910 at 5314.961 kb on - strand, within IAI46_24910 at 5314.965 kb on + strand, within IAI46_24910 at 5315.231 kb on + strand, within IAI46_24910 at 5315.232 kb on - strand, within IAI46_24910 at 5315.232 kb on - strand, within IAI46_24910 at 5315.398 kb on + strand, within IAI46_24910 at 5315.398 kb on + strand, within IAI46_24910 at 5315.398 kb on + strand, within IAI46_24910 at 5315.399 kb on - strand, within IAI46_24910 at 5315.405 kb on - strand, within IAI46_24910
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, anaerobic remove 5,311,371 + IAI46_24895 0.87 -0.1 5,311,372 - IAI46_24895 0.87 +0.5 5,311,486 + +0.5 5,311,486 + +0.6 5,311,486 + +0.8 5,311,487 - -0.7 5,311,529 - +0.1 5,311,576 + +0.6 5,311,577 - -0.3 5,311,577 - -0.4 5,311,579 + +2.0 5,311,634 + -0.4 5,311,641 + -0.6 5,311,642 - -1.0 5,311,642 - +0.0 5,311,642 - +0.5 5,311,657 + +0.2 5,311,658 - -0.6 5,311,803 + IAI46_24900 0.23 -0.3 5,311,803 + IAI46_24900 0.23 -0.1 5,311,889 + IAI46_24900 0.35 +0.2 5,311,889 + IAI46_24900 0.35 -0.1 5,311,929 + IAI46_24900 0.41 +0.2 5,311,969 + IAI46_24900 0.47 -1.0 5,311,970 - IAI46_24900 0.47 -0.3 5,311,980 + IAI46_24900 0.49 -0.2 5,311,980 + IAI46_24900 0.49 +0.6 5,311,981 - IAI46_24900 0.49 -1.8 5,311,981 - IAI46_24900 0.49 -0.8 5,312,055 + IAI46_24900 0.59 -0.9 5,312,055 + IAI46_24900 0.59 +0.7 5,312,056 - IAI46_24900 0.59 -1.8 5,312,056 - IAI46_24900 0.59 -2.2 5,312,056 - IAI46_24900 0.59 -0.3 5,312,070 + IAI46_24900 0.61 +0.1 5,312,117 - IAI46_24900 0.68 -1.5 5,312,169 + IAI46_24900 0.76 +0.1 5,312,169 + IAI46_24900 0.76 -0.5 5,312,170 - IAI46_24900 0.76 -0.1 5,312,170 - IAI46_24900 0.76 -1.1 5,312,170 - IAI46_24900 0.76 -0.3 5,312,170 - IAI46_24900 0.76 -0.0 5,312,170 - IAI46_24900 0.76 -0.1 5,312,369 + +0.1 5,312,464 - -0.8 5,312,491 + +0.1 5,312,575 + IAI46_24905 0.12 -1.2 5,312,575 + IAI46_24905 0.12 +0.0 5,312,576 - IAI46_24905 0.12 -0.9 5,312,679 + IAI46_24905 0.17 -1.0 5,312,680 - IAI46_24905 0.17 -0.8 5,312,806 + IAI46_24905 0.23 +0.5 5,312,806 + IAI46_24905 0.23 -0.7 5,312,807 - IAI46_24905 0.23 -0.6 5,312,858 + IAI46_24905 0.25 -1.5 5,313,029 + IAI46_24905 0.33 -0.9 5,313,069 + IAI46_24905 0.35 -0.3 5,313,104 + IAI46_24905 0.37 -0.0 5,313,161 - IAI46_24905 0.40 +0.2 5,313,161 - IAI46_24905 0.40 -0.7 5,313,371 - IAI46_24905 0.50 -0.7 5,313,746 + IAI46_24905 0.68 -0.1 5,313,746 + IAI46_24905 0.68 -0.5 5,313,804 - IAI46_24905 0.71 -1.0 5,313,951 - IAI46_24905 0.78 -1.4 5,314,125 + IAI46_24905 0.86 -1.3 5,314,125 + IAI46_24905 0.86 -2.5 5,314,126 - IAI46_24905 0.86 -0.7 5,314,182 - IAI46_24905 0.89 +0.7 5,314,316 - -0.8 5,314,316 - -1.4 5,314,336 + +0.8 5,314,337 - -2.2 5,314,337 - -0.8 5,314,337 - -0.2 5,314,337 - -0.9 5,314,337 - -0.9 5,314,337 - -0.9 5,314,401 + +0.0 5,314,402 - +0.4 5,314,461 + +0.3 5,314,462 - +0.6 5,314,471 + +0.1 5,314,472 - +0.1 5,314,508 + -0.2 5,314,508 + +0.3 5,314,509 - +0.9 5,314,509 - +0.6 5,314,509 - -0.5 5,314,509 - +0.0 5,314,515 + +0.5 5,314,515 + -0.4 5,314,516 - +0.1 5,314,542 + +1.4 5,314,560 + +0.5 5,314,560 + -0.1 5,314,560 + -0.2 5,314,561 - +0.2 5,314,561 - +0.2 5,314,605 + IAI46_24910 0.11 -1.2 5,314,689 - IAI46_24910 0.18 +0.4 5,314,710 - IAI46_24910 0.19 +0.2 5,314,728 - IAI46_24910 0.21 +0.7 5,314,883 + IAI46_24910 0.34 -0.2 5,314,883 + IAI46_24910 0.34 +0.5 5,314,883 + IAI46_24910 0.34 -0.1 5,314,884 - IAI46_24910 0.34 +0.9 5,314,884 - IAI46_24910 0.34 +0.1 5,314,884 - IAI46_24910 0.34 +0.4 5,314,884 - IAI46_24910 0.34 +0.2 5,314,952 - IAI46_24910 0.39 -0.8 5,314,961 - IAI46_24910 0.40 +0.0 5,314,965 + IAI46_24910 0.41 +0.3 5,315,231 + IAI46_24910 0.62 +0.9 5,315,232 - IAI46_24910 0.63 +2.4 5,315,232 - IAI46_24910 0.63 -0.0 5,315,398 + IAI46_24910 0.76 +0.3 5,315,398 + IAI46_24910 0.76 +0.0 5,315,398 + IAI46_24910 0.76 -0.0 5,315,399 - IAI46_24910 0.76 -0.1 5,315,405 - IAI46_24910 0.77 +0.5
Or see this region's nucleotide sequence