Experiment: dichromate 20 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_22795 and IAI46_22800 are separated by 169 nucleotides IAI46_22800 and IAI46_22805 are separated by 953 nucleotides
IAI46_22795: IAI46_22795 - glutamate--tRNA ligase, at 4,853,835 to 4,855,235
_22795
IAI46_22800: IAI46_22800 - hypothetical protein, at 4,855,405 to 4,855,896
_22800
IAI46_22805: IAI46_22805 - kdo(2)-lipid IV(A) palmitoleoyltransferase, at 4,856,850 to 4,857,770
_22805
Position (kb)
4855
4856 Strain fitness (log2 ratio)
-2
-1
0
1 at 4854.451 kb on + strand, within IAI46_22795 at 4854.455 kb on + strand, within IAI46_22795 at 4854.455 kb on + strand, within IAI46_22795 at 4854.549 kb on + strand, within IAI46_22795 at 4854.621 kb on - strand, within IAI46_22795 at 4854.623 kb on + strand, within IAI46_22795 at 4854.623 kb on + strand, within IAI46_22795 at 4854.624 kb on - strand, within IAI46_22795 at 4854.629 kb on + strand, within IAI46_22795 at 4854.630 kb on - strand, within IAI46_22795 at 4854.697 kb on + strand, within IAI46_22795 at 4854.698 kb on - strand, within IAI46_22795 at 4854.726 kb on - strand, within IAI46_22795 at 4854.761 kb on + strand, within IAI46_22795 at 4854.761 kb on + strand, within IAI46_22795 at 4854.761 kb on + strand, within IAI46_22795 at 4854.762 kb on - strand, within IAI46_22795 at 4854.874 kb on + strand, within IAI46_22795 at 4854.874 kb on + strand, within IAI46_22795 at 4854.874 kb on + strand, within IAI46_22795 at 4854.875 kb on - strand, within IAI46_22795 at 4854.991 kb on + strand, within IAI46_22795 at 4854.991 kb on + strand, within IAI46_22795 at 4854.992 kb on - strand, within IAI46_22795 at 4855.008 kb on - strand, within IAI46_22795 at 4855.016 kb on - strand, within IAI46_22795 at 4855.036 kb on + strand, within IAI46_22795 at 4855.036 kb on + strand, within IAI46_22795 at 4855.036 kb on + strand, within IAI46_22795 at 4855.036 kb on + strand, within IAI46_22795 at 4855.036 kb on + strand, within IAI46_22795 at 4855.037 kb on - strand, within IAI46_22795 at 4855.037 kb on - strand, within IAI46_22795 at 4855.037 kb on - strand, within IAI46_22795 at 4855.037 kb on - strand, within IAI46_22795 at 4855.037 kb on - strand, within IAI46_22795 at 4855.040 kb on + strand, within IAI46_22795 at 4855.040 kb on + strand, within IAI46_22795 at 4855.040 kb on + strand, within IAI46_22795 at 4855.041 kb on - strand, within IAI46_22795 at 4855.041 kb on - strand, within IAI46_22795 at 4855.041 kb on - strand, within IAI46_22795 at 4855.041 kb on - strand, within IAI46_22795 at 4855.041 kb on - strand, within IAI46_22795 at 4855.107 kb on - strand at 4855.124 kb on + strand at 4855.140 kb on - strand at 4855.140 kb on - strand at 4855.150 kb on + strand at 4855.150 kb on + strand at 4855.150 kb on + strand at 4855.151 kb on - strand at 4855.151 kb on - strand at 4855.162 kb on + strand at 4855.248 kb on + strand at 4855.251 kb on + strand at 4855.252 kb on - strand at 4855.252 kb on - strand at 4855.294 kb on - strand at 4855.355 kb on + strand at 4855.438 kb on + strand at 4855.446 kb on - strand at 4855.549 kb on + strand, within IAI46_22800 at 4855.559 kb on - strand, within IAI46_22800 at 4855.677 kb on + strand, within IAI46_22800 at 4855.678 kb on - strand, within IAI46_22800 at 4855.685 kb on - strand, within IAI46_22800 at 4855.835 kb on - strand, within IAI46_22800 at 4855.884 kb on - strand at 4856.036 kb on - strand at 4856.086 kb on - strand at 4856.114 kb on - strand at 4856.128 kb on + strand at 4856.139 kb on + strand at 4856.140 kb on - strand at 4856.386 kb on + strand at 4856.402 kb on + strand at 4856.525 kb on - strand at 4856.636 kb on - strand at 4856.669 kb on + strand at 4856.669 kb on + strand at 4856.670 kb on - strand at 4856.693 kb on + strand at 4856.693 kb on + strand at 4856.694 kb on - strand at 4856.694 kb on - strand at 4856.720 kb on - strand at 4856.735 kb on + strand at 4856.755 kb on + strand at 4856.755 kb on + strand at 4856.756 kb on - strand at 4856.756 kb on - strand at 4856.761 kb on + strand at 4856.761 kb on + strand at 4856.762 kb on - strand at 4856.783 kb on + strand at 4856.829 kb on + strand at 4856.829 kb on + strand at 4856.829 kb on + strand at 4856.829 kb on + strand at 4856.830 kb on - strand at 4856.837 kb on + strand at 4856.837 kb on + strand at 4856.849 kb on + strand at 4856.849 kb on + strand at 4856.849 kb on + strand at 4856.850 kb on - strand at 4856.850 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, anaerobic remove 4,854,451 + IAI46_22795 0.44 -0.5 4,854,455 + IAI46_22795 0.44 -0.2 4,854,455 + IAI46_22795 0.44 -0.3 4,854,549 + IAI46_22795 0.51 -0.4 4,854,621 - IAI46_22795 0.56 +0.4 4,854,623 + IAI46_22795 0.56 -0.8 4,854,623 + IAI46_22795 0.56 +0.2 4,854,624 - IAI46_22795 0.56 +0.1 4,854,629 + IAI46_22795 0.57 -0.0 4,854,630 - IAI46_22795 0.57 +0.3 4,854,697 + IAI46_22795 0.62 +0.4 4,854,698 - IAI46_22795 0.62 +0.1 4,854,726 - IAI46_22795 0.64 -0.0 4,854,761 + IAI46_22795 0.66 +0.4 4,854,761 + IAI46_22795 0.66 -0.9 4,854,761 + IAI46_22795 0.66 +0.3 4,854,762 - IAI46_22795 0.66 +0.3 4,854,874 + IAI46_22795 0.74 +0.1 4,854,874 + IAI46_22795 0.74 -0.3 4,854,874 + IAI46_22795 0.74 +0.2 4,854,875 - IAI46_22795 0.74 -0.2 4,854,991 + IAI46_22795 0.83 -1.4 4,854,991 + IAI46_22795 0.83 +0.5 4,854,992 - IAI46_22795 0.83 +0.7 4,855,008 - IAI46_22795 0.84 -0.2 4,855,016 - IAI46_22795 0.84 +0.2 4,855,036 + IAI46_22795 0.86 +0.0 4,855,036 + IAI46_22795 0.86 +0.5 4,855,036 + IAI46_22795 0.86 +1.5 4,855,036 + IAI46_22795 0.86 -0.0 4,855,036 + IAI46_22795 0.86 +0.2 4,855,037 - IAI46_22795 0.86 +0.1 4,855,037 - IAI46_22795 0.86 -0.6 4,855,037 - IAI46_22795 0.86 +0.7 4,855,037 - IAI46_22795 0.86 -2.2 4,855,037 - IAI46_22795 0.86 +0.0 4,855,040 + IAI46_22795 0.86 +0.4 4,855,040 + IAI46_22795 0.86 -0.3 4,855,040 + IAI46_22795 0.86 -0.4 4,855,041 - IAI46_22795 0.86 -0.5 4,855,041 - IAI46_22795 0.86 +0.4 4,855,041 - IAI46_22795 0.86 +0.0 4,855,041 - IAI46_22795 0.86 +0.0 4,855,041 - IAI46_22795 0.86 -1.8 4,855,107 - -0.5 4,855,124 + +0.6 4,855,140 - -0.0 4,855,140 - -0.6 4,855,150 + +0.2 4,855,150 + -0.3 4,855,150 + +0.2 4,855,151 - +0.0 4,855,151 - -0.0 4,855,162 + -0.6 4,855,248 + -2.3 4,855,251 + -0.8 4,855,252 - -1.9 4,855,252 - +0.2 4,855,294 - +0.0 4,855,355 + -0.6 4,855,438 + +0.7 4,855,446 - +1.1 4,855,549 + IAI46_22800 0.29 -0.2 4,855,559 - IAI46_22800 0.31 -0.5 4,855,677 + IAI46_22800 0.55 +0.4 4,855,678 - IAI46_22800 0.55 +0.3 4,855,685 - IAI46_22800 0.57 +0.1 4,855,835 - IAI46_22800 0.87 +0.0 4,855,884 - -0.0 4,856,036 - +0.9 4,856,086 - +0.4 4,856,114 - -1.6 4,856,128 + -0.3 4,856,139 + -0.1 4,856,140 - +1.0 4,856,386 + +0.4 4,856,402 + -0.1 4,856,525 - +0.8 4,856,636 - +1.0 4,856,669 + -0.2 4,856,669 + -0.5 4,856,670 - +0.9 4,856,693 + +0.1 4,856,693 + -0.4 4,856,694 - -0.1 4,856,694 - -0.4 4,856,720 - +0.8 4,856,735 + +1.1 4,856,755 + +0.2 4,856,755 + +0.1 4,856,756 - +0.9 4,856,756 - -0.4 4,856,761 + -0.4 4,856,761 + -0.1 4,856,762 - +0.3 4,856,783 + -0.9 4,856,829 + -0.5 4,856,829 + +0.7 4,856,829 + -0.5 4,856,829 + +1.0 4,856,830 - +1.1 4,856,837 + -0.7 4,856,837 + +0.0 4,856,849 + +0.7 4,856,849 + +0.2 4,856,849 + -0.2 4,856,850 - +0.3 4,856,850 - +0.2
Or see this region's nucleotide sequence