Experiment: dichromate 20 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_19745 and IAI46_19750 overlap by 14 nucleotides IAI46_19750 and IAI46_19755 are separated by 224 nucleotides IAI46_19755 and IAI46_19760 are separated by 68 nucleotides
IAI46_19745: IAI46_19745 - hypothetical protein, at 4,169,752 to 4,171,221
_19745
IAI46_19750: IAI46_19750 - MBL fold metallo-hydrolase, at 4,171,208 to 4,172,194
_19750
IAI46_19755: IAI46_19755 - hypothetical protein, at 4,172,419 to 4,172,877
_19755
IAI46_19760: IAI46_19760 - hypothetical protein, at 4,172,946 to 4,173,245
_19760
Position (kb)
4171
4172
4173 Strain fitness (log2 ratio)
-1
0
1
2 at 4170.210 kb on - strand, within IAI46_19745 at 4170.268 kb on - strand, within IAI46_19745 at 4170.273 kb on - strand, within IAI46_19745 at 4170.784 kb on - strand, within IAI46_19745 at 4170.882 kb on + strand, within IAI46_19745 at 4170.882 kb on + strand, within IAI46_19745 at 4170.892 kb on - strand, within IAI46_19745 at 4170.946 kb on - strand, within IAI46_19745 at 4171.163 kb on - strand at 4171.167 kb on - strand at 4171.167 kb on - strand at 4171.167 kb on - strand at 4171.224 kb on + strand at 4171.229 kb on + strand at 4171.229 kb on + strand at 4171.252 kb on - strand at 4171.370 kb on - strand, within IAI46_19750 at 4171.453 kb on + strand, within IAI46_19750 at 4171.588 kb on - strand, within IAI46_19750 at 4171.622 kb on - strand, within IAI46_19750 at 4171.673 kb on - strand, within IAI46_19750 at 4171.868 kb on - strand, within IAI46_19750 at 4172.048 kb on - strand, within IAI46_19750 at 4172.510 kb on + strand, within IAI46_19755 at 4172.945 kb on + strand at 4173.062 kb on + strand, within IAI46_19760 at 4173.122 kb on + strand, within IAI46_19760 at 4173.130 kb on - strand, within IAI46_19760
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, anaerobic remove 4,170,210 - IAI46_19745 0.31 +1.4 4,170,268 - IAI46_19745 0.35 -0.4 4,170,273 - IAI46_19745 0.35 +0.8 4,170,784 - IAI46_19745 0.70 +0.4 4,170,882 + IAI46_19745 0.77 +0.5 4,170,882 + IAI46_19745 0.77 +0.8 4,170,892 - IAI46_19745 0.78 +0.6 4,170,946 - IAI46_19745 0.81 +0.1 4,171,163 - +0.3 4,171,167 - +0.1 4,171,167 - +0.5 4,171,167 - +0.1 4,171,224 + +0.5 4,171,229 + +1.9 4,171,229 + +1.6 4,171,252 - +0.3 4,171,370 - IAI46_19750 0.16 +0.8 4,171,453 + IAI46_19750 0.25 +0.6 4,171,588 - IAI46_19750 0.39 -0.0 4,171,622 - IAI46_19750 0.42 +0.8 4,171,673 - IAI46_19750 0.47 -0.7 4,171,868 - IAI46_19750 0.67 +0.3 4,172,048 - IAI46_19750 0.85 +0.4 4,172,510 + IAI46_19755 0.20 -0.6 4,172,945 + -0.1 4,173,062 + IAI46_19760 0.39 -1.1 4,173,122 + IAI46_19760 0.59 +0.2 4,173,130 - IAI46_19760 0.61 +0.8
Or see this region's nucleotide sequence