Experiment: dichromate 20 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_18625 and IAI46_18630 are separated by 17 nucleotides IAI46_18630 and IAI46_18635 are separated by 775 nucleotides
IAI46_18625: IAI46_18625 - transaldolase, at 3,921,807 to 3,922,757
_18625
IAI46_18630: IAI46_18630 - transketolase, at 3,922,775 to 3,924,769
_18630
IAI46_18635: IAI46_18635 - urease accessory protein UreE, at 3,925,545 to 3,926,093
_18635
Position (kb)
3922
3923
3924
3925 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3921.802 kb on + strand at 3921.806 kb on - strand at 3921.817 kb on + strand at 3921.905 kb on + strand, within IAI46_18625 at 3921.905 kb on + strand, within IAI46_18625 at 3921.945 kb on + strand, within IAI46_18625 at 3921.945 kb on + strand, within IAI46_18625 at 3921.946 kb on - strand, within IAI46_18625 at 3921.947 kb on + strand, within IAI46_18625 at 3921.947 kb on + strand, within IAI46_18625 at 3921.947 kb on + strand, within IAI46_18625 at 3921.947 kb on + strand, within IAI46_18625 at 3921.976 kb on - strand, within IAI46_18625 at 3922.143 kb on - strand, within IAI46_18625 at 3922.159 kb on - strand, within IAI46_18625 at 3922.172 kb on + strand, within IAI46_18625 at 3922.173 kb on - strand, within IAI46_18625 at 3922.178 kb on + strand, within IAI46_18625 at 3922.178 kb on + strand, within IAI46_18625 at 3922.179 kb on - strand, within IAI46_18625 at 3922.346 kb on + strand, within IAI46_18625 at 3922.347 kb on - strand, within IAI46_18625 at 3922.347 kb on - strand, within IAI46_18625 at 3922.347 kb on - strand, within IAI46_18625 at 3922.347 kb on - strand, within IAI46_18625 at 3922.347 kb on - strand, within IAI46_18625 at 3922.350 kb on + strand, within IAI46_18625 at 3922.350 kb on + strand, within IAI46_18625 at 3922.350 kb on + strand, within IAI46_18625 at 3922.350 kb on + strand, within IAI46_18625 at 3922.351 kb on - strand, within IAI46_18625 at 3922.351 kb on - strand, within IAI46_18625 at 3922.351 kb on - strand, within IAI46_18625 at 3922.351 kb on - strand, within IAI46_18625 at 3922.351 kb on - strand, within IAI46_18625 at 3922.359 kb on + strand, within IAI46_18625 at 3922.360 kb on - strand, within IAI46_18625 at 3922.432 kb on - strand, within IAI46_18625 at 3922.432 kb on - strand, within IAI46_18625 at 3922.432 kb on - strand, within IAI46_18625 at 3922.437 kb on + strand, within IAI46_18625 at 3922.440 kb on + strand, within IAI46_18625 at 3922.440 kb on + strand, within IAI46_18625 at 3922.469 kb on + strand, within IAI46_18625 at 3922.470 kb on - strand, within IAI46_18625 at 3922.470 kb on - strand, within IAI46_18625 at 3922.492 kb on + strand, within IAI46_18625 at 3922.493 kb on - strand, within IAI46_18625 at 3922.659 kb on - strand, within IAI46_18625 at 3922.659 kb on - strand, within IAI46_18625 at 3922.659 kb on - strand, within IAI46_18625 at 3922.755 kb on + strand at 3923.230 kb on + strand, within IAI46_18630 at 3923.230 kb on + strand, within IAI46_18630 at 3925.141 kb on + strand at 3925.328 kb on - strand at 3925.511 kb on + strand at 3925.627 kb on - strand, within IAI46_18635
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, anaerobic remove 3,921,802 + +0.6 3,921,806 - +0.2 3,921,817 + +1.0 3,921,905 + IAI46_18625 0.10 -0.8 3,921,905 + IAI46_18625 0.10 +0.9 3,921,945 + IAI46_18625 0.15 +0.2 3,921,945 + IAI46_18625 0.15 -0.5 3,921,946 - IAI46_18625 0.15 +1.8 3,921,947 + IAI46_18625 0.15 +1.0 3,921,947 + IAI46_18625 0.15 +0.1 3,921,947 + IAI46_18625 0.15 -1.0 3,921,947 + IAI46_18625 0.15 -0.8 3,921,976 - IAI46_18625 0.18 -0.2 3,922,143 - IAI46_18625 0.35 -1.5 3,922,159 - IAI46_18625 0.37 -0.2 3,922,172 + IAI46_18625 0.38 +0.0 3,922,173 - IAI46_18625 0.38 -0.4 3,922,178 + IAI46_18625 0.39 -0.5 3,922,178 + IAI46_18625 0.39 +0.4 3,922,179 - IAI46_18625 0.39 -0.1 3,922,346 + IAI46_18625 0.57 +0.9 3,922,347 - IAI46_18625 0.57 +0.6 3,922,347 - IAI46_18625 0.57 -0.1 3,922,347 - IAI46_18625 0.57 -0.1 3,922,347 - IAI46_18625 0.57 +0.8 3,922,347 - IAI46_18625 0.57 +1.4 3,922,350 + IAI46_18625 0.57 -0.6 3,922,350 + IAI46_18625 0.57 +0.1 3,922,350 + IAI46_18625 0.57 -0.0 3,922,350 + IAI46_18625 0.57 +0.8 3,922,351 - IAI46_18625 0.57 -0.3 3,922,351 - IAI46_18625 0.57 +0.1 3,922,351 - IAI46_18625 0.57 -2.5 3,922,351 - IAI46_18625 0.57 -0.3 3,922,351 - IAI46_18625 0.57 -0.1 3,922,359 + IAI46_18625 0.58 -1.4 3,922,360 - IAI46_18625 0.58 -0.6 3,922,432 - IAI46_18625 0.66 -0.9 3,922,432 - IAI46_18625 0.66 -1.7 3,922,432 - IAI46_18625 0.66 +1.0 3,922,437 + IAI46_18625 0.66 -0.2 3,922,440 + IAI46_18625 0.67 +0.2 3,922,440 + IAI46_18625 0.67 +1.0 3,922,469 + IAI46_18625 0.70 +1.3 3,922,470 - IAI46_18625 0.70 +1.6 3,922,470 - IAI46_18625 0.70 +0.5 3,922,492 + IAI46_18625 0.72 +1.5 3,922,493 - IAI46_18625 0.72 +0.0 3,922,659 - IAI46_18625 0.90 -0.1 3,922,659 - IAI46_18625 0.90 +0.1 3,922,659 - IAI46_18625 0.90 -1.6 3,922,755 + +0.2 3,923,230 + IAI46_18630 0.23 -0.2 3,923,230 + IAI46_18630 0.23 -1.2 3,925,141 + -0.5 3,925,328 - +0.3 3,925,511 + +0.0 3,925,627 - IAI46_18635 0.15 -1.3
Or see this region's nucleotide sequence