Experiment: dichromate 20 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_18195 and IAI46_18200 overlap by 4 nucleotides IAI46_18200 and IAI46_18205 are separated by 10 nucleotides IAI46_18205 and IAI46_18210 are separated by 397 nucleotides
IAI46_18195: IAI46_18195 - sensor histidine kinase, at 3,830,430 to 3,832,139
_18195
IAI46_18200: IAI46_18200 - response regulator transcription factor, at 3,832,136 to 3,832,870
_18200
IAI46_18205: IAI46_18205 - DUF2502 domain-containing protein, at 3,832,881 to 3,833,213
_18205
IAI46_18210: IAI46_18210 - OFA family MFS transporter, at 3,833,611 to 3,834,837
_18210
Position (kb)
3832
3833
3834 Strain fitness (log2 ratio)
-1
0
1
2 at 3832.071 kb on + strand at 3832.187 kb on + strand at 3832.188 kb on - strand at 3832.301 kb on - strand, within IAI46_18200 at 3832.366 kb on - strand, within IAI46_18200 at 3832.373 kb on - strand, within IAI46_18200 at 3832.385 kb on - strand, within IAI46_18200 at 3832.427 kb on + strand, within IAI46_18200 at 3832.443 kb on - strand, within IAI46_18200 at 3832.541 kb on - strand, within IAI46_18200 at 3832.553 kb on - strand, within IAI46_18200 at 3832.601 kb on + strand, within IAI46_18200 at 3832.604 kb on + strand, within IAI46_18200 at 3832.604 kb on + strand, within IAI46_18200 at 3832.605 kb on - strand, within IAI46_18200 at 3832.605 kb on - strand, within IAI46_18200 at 3832.730 kb on + strand, within IAI46_18200 at 3832.731 kb on - strand, within IAI46_18200 at 3832.731 kb on - strand, within IAI46_18200 at 3832.777 kb on + strand, within IAI46_18200 at 3832.785 kb on - strand, within IAI46_18200 at 3832.785 kb on - strand, within IAI46_18200 at 3832.868 kb on + strand at 3832.868 kb on + strand at 3832.903 kb on + strand at 3832.906 kb on + strand at 3832.909 kb on + strand at 3832.909 kb on + strand at 3832.910 kb on - strand at 3832.939 kb on + strand, within IAI46_18205 at 3832.981 kb on + strand, within IAI46_18205 at 3832.982 kb on - strand, within IAI46_18205 at 3832.982 kb on - strand, within IAI46_18205 at 3833.005 kb on + strand, within IAI46_18205 at 3833.005 kb on + strand, within IAI46_18205 at 3833.006 kb on - strand, within IAI46_18205 at 3833.009 kb on - strand, within IAI46_18205 at 3833.009 kb on - strand, within IAI46_18205 at 3833.029 kb on + strand, within IAI46_18205 at 3833.030 kb on - strand, within IAI46_18205 at 3833.194 kb on - strand at 3833.259 kb on + strand at 3833.259 kb on + strand at 3833.259 kb on + strand at 3833.260 kb on - strand at 3833.260 kb on - strand at 3833.260 kb on - strand at 3833.282 kb on + strand at 3833.285 kb on - strand at 3833.302 kb on - strand at 3833.504 kb on + strand at 3833.507 kb on + strand at 3833.507 kb on + strand at 3833.508 kb on - strand at 3833.516 kb on + strand at 3833.516 kb on + strand at 3833.517 kb on - strand at 3833.518 kb on + strand at 3833.518 kb on + strand at 3833.518 kb on + strand at 3833.518 kb on + strand at 3833.518 kb on + strand at 3833.518 kb on + strand at 3833.518 kb on + strand at 3833.518 kb on + strand at 3833.518 kb on + strand at 3833.518 kb on + strand at 3833.519 kb on - strand at 3833.519 kb on - strand at 3833.519 kb on - strand at 3833.519 kb on - strand at 3833.521 kb on + strand at 3833.521 kb on + strand at 3833.521 kb on + strand at 3833.521 kb on + strand at 3833.522 kb on - strand at 3833.522 kb on - strand at 3833.522 kb on - strand at 3833.522 kb on - strand at 3833.522 kb on - strand at 3833.522 kb on - strand at 3833.522 kb on - strand at 3833.587 kb on - strand at 3833.620 kb on - strand at 3833.620 kb on - strand at 3833.620 kb on - strand at 3833.639 kb on + strand at 3833.682 kb on + strand at 3833.683 kb on - strand at 3833.683 kb on - strand at 3833.686 kb on + strand at 3833.686 kb on + strand at 3833.687 kb on - strand at 3833.687 kb on - strand at 3833.687 kb on - strand at 3833.688 kb on + strand at 3833.688 kb on + strand at 3833.862 kb on - strand, within IAI46_18210 at 3833.912 kb on - strand, within IAI46_18210 at 3833.946 kb on - strand, within IAI46_18210 at 3833.956 kb on + strand, within IAI46_18210 at 3833.956 kb on + strand, within IAI46_18210 at 3833.957 kb on - strand, within IAI46_18210 at 3833.957 kb on - strand, within IAI46_18210 at 3833.958 kb on + strand, within IAI46_18210 at 3833.958 kb on + strand, within IAI46_18210 at 3833.958 kb on + strand, within IAI46_18210 at 3833.958 kb on + strand, within IAI46_18210 at 3833.958 kb on + strand, within IAI46_18210 at 3833.959 kb on - strand, within IAI46_18210 at 3833.964 kb on + strand, within IAI46_18210 at 3834.113 kb on - strand, within IAI46_18210
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, anaerobic remove 3,832,071 + -0.1 3,832,187 + +0.6 3,832,188 - +1.0 3,832,301 - IAI46_18200 0.22 -0.2 3,832,366 - IAI46_18200 0.31 +0.9 3,832,373 - IAI46_18200 0.32 -0.2 3,832,385 - IAI46_18200 0.34 -0.9 3,832,427 + IAI46_18200 0.40 -0.1 3,832,443 - IAI46_18200 0.42 +0.4 3,832,541 - IAI46_18200 0.55 +0.4 3,832,553 - IAI46_18200 0.57 +0.2 3,832,601 + IAI46_18200 0.63 -0.1 3,832,604 + IAI46_18200 0.64 -0.5 3,832,604 + IAI46_18200 0.64 +0.5 3,832,605 - IAI46_18200 0.64 +0.9 3,832,605 - IAI46_18200 0.64 +0.8 3,832,730 + IAI46_18200 0.81 -1.5 3,832,731 - IAI46_18200 0.81 +0.9 3,832,731 - IAI46_18200 0.81 -0.9 3,832,777 + IAI46_18200 0.87 -0.4 3,832,785 - IAI46_18200 0.88 +0.9 3,832,785 - IAI46_18200 0.88 -0.4 3,832,868 + -0.7 3,832,868 + +0.5 3,832,903 + -0.3 3,832,906 + -0.1 3,832,909 + +2.1 3,832,909 + +0.3 3,832,910 - -0.2 3,832,939 + IAI46_18205 0.17 +0.2 3,832,981 + IAI46_18205 0.30 +1.0 3,832,982 - IAI46_18205 0.30 -0.1 3,832,982 - IAI46_18205 0.30 -0.5 3,833,005 + IAI46_18205 0.37 -0.5 3,833,005 + IAI46_18205 0.37 +0.8 3,833,006 - IAI46_18205 0.38 +0.6 3,833,009 - IAI46_18205 0.38 +0.2 3,833,009 - IAI46_18205 0.38 +1.1 3,833,029 + IAI46_18205 0.44 +0.4 3,833,030 - IAI46_18205 0.45 +0.3 3,833,194 - +0.9 3,833,259 + -0.9 3,833,259 + +1.5 3,833,259 + -0.0 3,833,260 - +1.5 3,833,260 - -0.0 3,833,260 - +0.6 3,833,282 + +1.0 3,833,285 - +0.5 3,833,302 - +0.0 3,833,504 + -0.1 3,833,507 + -1.0 3,833,507 + -0.3 3,833,508 - +0.6 3,833,516 + +0.0 3,833,516 + +0.2 3,833,517 - +0.4 3,833,518 + -1.2 3,833,518 + +0.3 3,833,518 + +0.1 3,833,518 + -0.1 3,833,518 + -0.8 3,833,518 + +0.2 3,833,518 + +0.9 3,833,518 + +0.6 3,833,518 + +1.0 3,833,518 + -0.1 3,833,519 - +0.5 3,833,519 - +0.6 3,833,519 - +0.2 3,833,519 - +1.0 3,833,521 + +1.3 3,833,521 + -0.5 3,833,521 + -0.5 3,833,521 + -0.8 3,833,522 - +1.5 3,833,522 - +1.1 3,833,522 - -0.1 3,833,522 - +0.8 3,833,522 - +1.0 3,833,522 - -0.2 3,833,522 - +0.4 3,833,587 - -0.3 3,833,620 - +0.0 3,833,620 - +0.3 3,833,620 - -1.0 3,833,639 + +0.8 3,833,682 + +0.2 3,833,683 - +1.0 3,833,683 - +0.5 3,833,686 + -1.5 3,833,686 + +1.3 3,833,687 - +0.2 3,833,687 - +1.1 3,833,687 - +0.4 3,833,688 + +0.2 3,833,688 + +1.3 3,833,862 - IAI46_18210 0.20 +0.3 3,833,912 - IAI46_18210 0.25 +0.5 3,833,946 - IAI46_18210 0.27 +0.1 3,833,956 + IAI46_18210 0.28 -0.1 3,833,956 + IAI46_18210 0.28 -0.3 3,833,957 - IAI46_18210 0.28 -0.9 3,833,957 - IAI46_18210 0.28 +0.7 3,833,958 + IAI46_18210 0.28 -0.9 3,833,958 + IAI46_18210 0.28 +0.5 3,833,958 + IAI46_18210 0.28 -0.7 3,833,958 + IAI46_18210 0.28 +0.2 3,833,958 + IAI46_18210 0.28 -0.2 3,833,959 - IAI46_18210 0.28 +0.3 3,833,964 + IAI46_18210 0.29 +0.2 3,834,113 - IAI46_18210 0.41 -0.5
Or see this region's nucleotide sequence