Experiment: dichromate 20 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_17435 and IAI46_17440 are separated by 53 nucleotides IAI46_17440 and IAI46_17445 are separated by 21 nucleotides
IAI46_17435: IAI46_17435 - DUF4186 domain-containing protein, at 3,660,198 to 3,660,602
_17435
IAI46_17440: IAI46_17440 - MFS transporter, at 3,660,656 to 3,661,810
_17440
IAI46_17445: IAI46_17445 - phosphotransferase RcsD, at 3,661,832 to 3,664,534
_17445
Position (kb)
3660
3661
3662 Strain fitness (log2 ratio)
-2
-1
0
1 at 3659.687 kb on + strand at 3659.781 kb on + strand at 3659.827 kb on - strand at 3659.871 kb on - strand at 3659.876 kb on + strand at 3659.891 kb on + strand at 3659.940 kb on + strand at 3659.945 kb on - strand at 3659.973 kb on + strand at 3660.002 kb on + strand at 3660.003 kb on - strand at 3660.060 kb on + strand at 3660.096 kb on + strand at 3660.203 kb on - strand at 3660.203 kb on - strand at 3660.465 kb on - strand, within IAI46_17435 at 3660.465 kb on - strand, within IAI46_17435 at 3660.465 kb on - strand, within IAI46_17435 at 3660.507 kb on + strand, within IAI46_17435 at 3660.508 kb on - strand, within IAI46_17435 at 3660.510 kb on - strand, within IAI46_17435 at 3660.510 kb on - strand, within IAI46_17435 at 3660.604 kb on - strand at 3660.639 kb on + strand at 3660.640 kb on - strand at 3660.669 kb on + strand at 3660.669 kb on + strand at 3660.670 kb on - strand at 3660.933 kb on - strand, within IAI46_17440 at 3660.958 kb on + strand, within IAI46_17440 at 3660.958 kb on + strand, within IAI46_17440 at 3660.958 kb on + strand, within IAI46_17440 at 3660.958 kb on + strand, within IAI46_17440 at 3660.959 kb on - strand, within IAI46_17440 at 3661.030 kb on + strand, within IAI46_17440 at 3661.030 kb on + strand, within IAI46_17440 at 3661.033 kb on - strand, within IAI46_17440 at 3661.033 kb on - strand, within IAI46_17440 at 3661.129 kb on + strand, within IAI46_17440 at 3661.183 kb on - strand, within IAI46_17440 at 3661.224 kb on + strand, within IAI46_17440 at 3661.310 kb on - strand, within IAI46_17440 at 3661.475 kb on + strand, within IAI46_17440 at 3661.475 kb on + strand, within IAI46_17440 at 3661.475 kb on + strand, within IAI46_17440 at 3661.477 kb on + strand, within IAI46_17440 at 3661.477 kb on + strand, within IAI46_17440 at 3661.477 kb on + strand, within IAI46_17440 at 3661.478 kb on - strand, within IAI46_17440 at 3661.592 kb on - strand, within IAI46_17440 at 3661.636 kb on + strand, within IAI46_17440 at 3661.636 kb on + strand, within IAI46_17440 at 3661.674 kb on + strand, within IAI46_17440 at 3661.675 kb on - strand, within IAI46_17440 at 3661.679 kb on + strand, within IAI46_17440 at 3661.679 kb on + strand, within IAI46_17440 at 3661.767 kb on + strand at 3661.767 kb on + strand at 3661.768 kb on - strand at 3661.768 kb on - strand at 3661.832 kb on - strand at 3661.867 kb on + strand at 3661.868 kb on - strand at 3661.868 kb on - strand at 3661.870 kb on + strand at 3661.870 kb on + strand at 3661.934 kb on + strand at 3661.935 kb on - strand at 3661.937 kb on - strand at 3661.937 kb on - strand at 3662.012 kb on + strand at 3662.111 kb on + strand, within IAI46_17445 at 3662.115 kb on - strand, within IAI46_17445 at 3662.204 kb on + strand, within IAI46_17445 at 3662.205 kb on - strand, within IAI46_17445 at 3662.205 kb on - strand, within IAI46_17445 at 3662.249 kb on + strand, within IAI46_17445 at 3662.249 kb on + strand, within IAI46_17445 at 3662.250 kb on - strand, within IAI46_17445 at 3662.257 kb on + strand, within IAI46_17445 at 3662.461 kb on + strand, within IAI46_17445 at 3662.525 kb on - strand, within IAI46_17445 at 3662.536 kb on + strand, within IAI46_17445 at 3662.537 kb on - strand, within IAI46_17445 at 3662.627 kb on - strand, within IAI46_17445 at 3662.682 kb on + strand, within IAI46_17445 at 3662.740 kb on + strand, within IAI46_17445 at 3662.740 kb on + strand, within IAI46_17445 at 3662.740 kb on + strand, within IAI46_17445 at 3662.741 kb on - strand, within IAI46_17445 at 3662.749 kb on - strand, within IAI46_17445 at 3662.795 kb on + strand, within IAI46_17445
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, anaerobic remove 3,659,687 + -0.6 3,659,781 + +0.2 3,659,827 - -2.1 3,659,871 - -0.2 3,659,876 + -0.5 3,659,891 + -0.3 3,659,940 + +0.1 3,659,945 - -0.0 3,659,973 + -0.9 3,660,002 + +0.1 3,660,003 - +0.0 3,660,060 + -0.1 3,660,096 + -2.0 3,660,203 - +0.7 3,660,203 - -0.4 3,660,465 - IAI46_17435 0.66 -0.3 3,660,465 - IAI46_17435 0.66 +0.0 3,660,465 - IAI46_17435 0.66 -0.7 3,660,507 + IAI46_17435 0.76 +0.4 3,660,508 - IAI46_17435 0.77 +0.6 3,660,510 - IAI46_17435 0.77 +1.0 3,660,510 - IAI46_17435 0.77 +0.8 3,660,604 - +0.7 3,660,639 + +1.4 3,660,640 - +0.2 3,660,669 + +0.0 3,660,669 + -0.9 3,660,670 - +0.5 3,660,933 - IAI46_17440 0.24 -0.5 3,660,958 + IAI46_17440 0.26 -0.4 3,660,958 + IAI46_17440 0.26 -0.3 3,660,958 + IAI46_17440 0.26 +1.0 3,660,958 + IAI46_17440 0.26 +1.0 3,660,959 - IAI46_17440 0.26 -0.8 3,661,030 + IAI46_17440 0.32 +0.1 3,661,030 + IAI46_17440 0.32 +0.8 3,661,033 - IAI46_17440 0.33 -1.1 3,661,033 - IAI46_17440 0.33 +0.2 3,661,129 + IAI46_17440 0.41 +0.8 3,661,183 - IAI46_17440 0.46 +0.7 3,661,224 + IAI46_17440 0.49 -0.3 3,661,310 - IAI46_17440 0.57 -0.6 3,661,475 + IAI46_17440 0.71 +0.5 3,661,475 + IAI46_17440 0.71 -0.0 3,661,475 + IAI46_17440 0.71 -0.4 3,661,477 + IAI46_17440 0.71 +0.1 3,661,477 + IAI46_17440 0.71 +0.4 3,661,477 + IAI46_17440 0.71 +0.2 3,661,478 - IAI46_17440 0.71 -0.1 3,661,592 - IAI46_17440 0.81 -1.2 3,661,636 + IAI46_17440 0.85 +0.2 3,661,636 + IAI46_17440 0.85 +1.1 3,661,674 + IAI46_17440 0.88 +0.2 3,661,675 - IAI46_17440 0.88 +0.9 3,661,679 + IAI46_17440 0.89 -0.4 3,661,679 + IAI46_17440 0.89 +0.6 3,661,767 + +0.4 3,661,767 + +0.3 3,661,768 - -0.6 3,661,768 - +0.7 3,661,832 - +0.5 3,661,867 + +0.1 3,661,868 - -0.0 3,661,868 - -1.4 3,661,870 + -0.5 3,661,870 + +0.3 3,661,934 + +0.7 3,661,935 - +0.3 3,661,937 - -0.2 3,661,937 - +0.1 3,662,012 + -0.0 3,662,111 + IAI46_17445 0.10 -0.3 3,662,115 - IAI46_17445 0.10 -0.5 3,662,204 + IAI46_17445 0.14 -1.5 3,662,205 - IAI46_17445 0.14 +1.7 3,662,205 - IAI46_17445 0.14 -1.0 3,662,249 + IAI46_17445 0.15 -1.2 3,662,249 + IAI46_17445 0.15 -1.6 3,662,250 - IAI46_17445 0.15 -1.1 3,662,257 + IAI46_17445 0.16 +0.0 3,662,461 + IAI46_17445 0.23 +0.5 3,662,525 - IAI46_17445 0.26 +0.6 3,662,536 + IAI46_17445 0.26 -0.0 3,662,537 - IAI46_17445 0.26 +0.7 3,662,627 - IAI46_17445 0.29 -0.4 3,662,682 + IAI46_17445 0.31 +0.2 3,662,740 + IAI46_17445 0.34 +0.3 3,662,740 + IAI46_17445 0.34 -1.1 3,662,740 + IAI46_17445 0.34 -0.3 3,662,741 - IAI46_17445 0.34 -0.1 3,662,749 - IAI46_17445 0.34 -0.3 3,662,795 + IAI46_17445 0.36 -0.1
Or see this region's nucleotide sequence