Experiment: dichromate 20 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_17120 and IAI46_17125 are separated by 99 nucleotides IAI46_17125 and IAI46_17130 are separated by 214 nucleotides
IAI46_17120: IAI46_17120 - FUSC family protein, at 3,590,167 to 3,591,234
_17120
IAI46_17125: IAI46_17125 - N-acetylmuramoyl-L-alanine amidase, at 3,591,334 to 3,592,101
_17125
IAI46_17130: IAI46_17130 - helix-turn-helix transcriptional regulator, at 3,592,316 to 3,593,062
_17130
Position (kb)
3591
3592
3593 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3590.384 kb on - strand, within IAI46_17120 at 3590.454 kb on + strand, within IAI46_17120 at 3590.454 kb on + strand, within IAI46_17120 at 3590.455 kb on - strand, within IAI46_17120 at 3590.481 kb on - strand, within IAI46_17120 at 3590.506 kb on - strand, within IAI46_17120 at 3590.610 kb on + strand, within IAI46_17120 at 3590.610 kb on + strand, within IAI46_17120 at 3590.611 kb on - strand, within IAI46_17120 at 3590.611 kb on - strand, within IAI46_17120 at 3590.653 kb on + strand, within IAI46_17120 at 3590.654 kb on - strand, within IAI46_17120 at 3590.654 kb on - strand, within IAI46_17120 at 3590.654 kb on - strand, within IAI46_17120 at 3590.654 kb on - strand, within IAI46_17120 at 3590.659 kb on - strand, within IAI46_17120 at 3590.672 kb on + strand, within IAI46_17120 at 3590.681 kb on + strand, within IAI46_17120 at 3590.697 kb on + strand, within IAI46_17120 at 3590.698 kb on - strand, within IAI46_17120 at 3590.733 kb on + strand, within IAI46_17120 at 3590.733 kb on + strand, within IAI46_17120 at 3590.823 kb on + strand, within IAI46_17120 at 3590.823 kb on + strand, within IAI46_17120 at 3590.882 kb on + strand, within IAI46_17120 at 3590.882 kb on + strand, within IAI46_17120 at 3590.883 kb on - strand, within IAI46_17120 at 3590.907 kb on - strand, within IAI46_17120 at 3590.960 kb on + strand, within IAI46_17120 at 3590.960 kb on + strand, within IAI46_17120 at 3591.004 kb on + strand, within IAI46_17120 at 3591.084 kb on + strand, within IAI46_17120 at 3591.215 kb on - strand at 3591.335 kb on + strand at 3591.402 kb on - strand at 3591.450 kb on - strand, within IAI46_17125 at 3591.500 kb on - strand, within IAI46_17125 at 3591.522 kb on + strand, within IAI46_17125 at 3591.522 kb on + strand, within IAI46_17125 at 3591.522 kb on + strand, within IAI46_17125 at 3591.523 kb on - strand, within IAI46_17125 at 3591.523 kb on - strand, within IAI46_17125 at 3591.523 kb on - strand, within IAI46_17125 at 3591.542 kb on + strand, within IAI46_17125 at 3591.578 kb on + strand, within IAI46_17125 at 3591.578 kb on + strand, within IAI46_17125 at 3591.932 kb on + strand, within IAI46_17125 at 3591.932 kb on + strand, within IAI46_17125 at 3591.932 kb on + strand, within IAI46_17125 at 3591.932 kb on + strand, within IAI46_17125 at 3591.933 kb on - strand, within IAI46_17125 at 3591.933 kb on - strand, within IAI46_17125 at 3591.933 kb on - strand, within IAI46_17125 at 3591.962 kb on + strand, within IAI46_17125 at 3592.024 kb on - strand, within IAI46_17125 at 3592.025 kb on + strand at 3592.025 kb on + strand at 3592.026 kb on - strand at 3592.026 kb on - strand at 3592.085 kb on + strand at 3592.085 kb on + strand at 3592.092 kb on + strand at 3592.104 kb on + strand at 3592.145 kb on - strand at 3592.145 kb on - strand at 3592.157 kb on + strand at 3592.158 kb on - strand at 3592.197 kb on - strand at 3592.333 kb on - strand at 3592.342 kb on + strand at 3592.367 kb on + strand at 3592.745 kb on + strand, within IAI46_17130 at 3592.745 kb on + strand, within IAI46_17130 at 3592.745 kb on + strand, within IAI46_17130 at 3592.745 kb on + strand, within IAI46_17130 at 3592.858 kb on + strand, within IAI46_17130 at 3592.858 kb on + strand, within IAI46_17130 at 3593.060 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, anaerobic remove 3,590,384 - IAI46_17120 0.20 -0.1 3,590,454 + IAI46_17120 0.27 -0.4 3,590,454 + IAI46_17120 0.27 -0.9 3,590,455 - IAI46_17120 0.27 +0.2 3,590,481 - IAI46_17120 0.29 -1.2 3,590,506 - IAI46_17120 0.32 -0.7 3,590,610 + IAI46_17120 0.41 -0.0 3,590,610 + IAI46_17120 0.41 +0.6 3,590,611 - IAI46_17120 0.42 -0.5 3,590,611 - IAI46_17120 0.42 -1.9 3,590,653 + IAI46_17120 0.46 -0.8 3,590,654 - IAI46_17120 0.46 +0.6 3,590,654 - IAI46_17120 0.46 -1.0 3,590,654 - IAI46_17120 0.46 -1.4 3,590,654 - IAI46_17120 0.46 +0.7 3,590,659 - IAI46_17120 0.46 +0.3 3,590,672 + IAI46_17120 0.47 -0.1 3,590,681 + IAI46_17120 0.48 -0.2 3,590,697 + IAI46_17120 0.50 +0.4 3,590,698 - IAI46_17120 0.50 -0.5 3,590,733 + IAI46_17120 0.53 -0.3 3,590,733 + IAI46_17120 0.53 -0.6 3,590,823 + IAI46_17120 0.61 -0.5 3,590,823 + IAI46_17120 0.61 +0.6 3,590,882 + IAI46_17120 0.67 -1.0 3,590,882 + IAI46_17120 0.67 +0.3 3,590,883 - IAI46_17120 0.67 +0.4 3,590,907 - IAI46_17120 0.69 +0.3 3,590,960 + IAI46_17120 0.74 -0.2 3,590,960 + IAI46_17120 0.74 -0.2 3,591,004 + IAI46_17120 0.78 +1.2 3,591,084 + IAI46_17120 0.86 -0.2 3,591,215 - -1.7 3,591,335 + +0.8 3,591,402 - +0.3 3,591,450 - IAI46_17125 0.15 +0.9 3,591,500 - IAI46_17125 0.22 +0.2 3,591,522 + IAI46_17125 0.24 -0.3 3,591,522 + IAI46_17125 0.24 +0.8 3,591,522 + IAI46_17125 0.24 -0.5 3,591,523 - IAI46_17125 0.25 -0.5 3,591,523 - IAI46_17125 0.25 +0.1 3,591,523 - IAI46_17125 0.25 +0.8 3,591,542 + IAI46_17125 0.27 +0.5 3,591,578 + IAI46_17125 0.32 +0.3 3,591,578 + IAI46_17125 0.32 +0.8 3,591,932 + IAI46_17125 0.78 -0.0 3,591,932 + IAI46_17125 0.78 +0.1 3,591,932 + IAI46_17125 0.78 +1.1 3,591,932 + IAI46_17125 0.78 -0.8 3,591,933 - IAI46_17125 0.78 -1.9 3,591,933 - IAI46_17125 0.78 +0.8 3,591,933 - IAI46_17125 0.78 +0.6 3,591,962 + IAI46_17125 0.82 -0.6 3,592,024 - IAI46_17125 0.90 -0.5 3,592,025 + -0.8 3,592,025 + +0.4 3,592,026 - +0.7 3,592,026 - -0.4 3,592,085 + -0.9 3,592,085 + -0.6 3,592,092 + -0.7 3,592,104 + +0.9 3,592,145 - +0.6 3,592,145 - -0.5 3,592,157 + +1.8 3,592,158 - -1.5 3,592,197 - +0.1 3,592,333 - -0.2 3,592,342 + +0.6 3,592,367 + +0.4 3,592,745 + IAI46_17130 0.57 -0.3 3,592,745 + IAI46_17130 0.57 +0.3 3,592,745 + IAI46_17130 0.57 +1.2 3,592,745 + IAI46_17130 0.57 +0.3 3,592,858 + IAI46_17130 0.73 +1.1 3,592,858 + IAI46_17130 0.73 +0.5 3,593,060 + +0.3
Or see this region's nucleotide sequence