Experiment: dichromate 20 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_16740 and IAI46_16745 are separated by 288 nucleotides IAI46_16745 and IAI46_16750 overlap by 4 nucleotides IAI46_16750 and IAI46_16755 are separated by 1 nucleotides
IAI46_16740: IAI46_16740 - efflux RND transporter periplasmic adaptor subunit, at 3,511,156 to 3,512,358
_16740
IAI46_16745: IAI46_16745 - heavy metal response regulator transcription factor, at 3,512,647 to 3,513,354
_16745
IAI46_16750: IAI46_16750 - heavy metal sensor histidine kinase, at 3,513,351 to 3,514,808
_16750
IAI46_16755: IAI46_16755 - nitrogen assimilation transcriptional regulator NAC, at 3,514,810 to 3,515,733
_16755
Position (kb)
3513
3514
3515 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3512.428 kb on + strand at 3512.428 kb on + strand at 3512.429 kb on - strand at 3512.464 kb on + strand at 3512.465 kb on - strand at 3512.465 kb on - strand at 3512.612 kb on + strand at 3512.616 kb on + strand at 3512.654 kb on + strand at 3512.720 kb on - strand, within IAI46_16745 at 3512.727 kb on - strand, within IAI46_16745 at 3512.727 kb on - strand, within IAI46_16745 at 3512.727 kb on - strand, within IAI46_16745 at 3512.727 kb on - strand, within IAI46_16745 at 3512.780 kb on - strand, within IAI46_16745 at 3512.780 kb on - strand, within IAI46_16745 at 3512.824 kb on + strand, within IAI46_16745 at 3512.935 kb on + strand, within IAI46_16745 at 3512.935 kb on + strand, within IAI46_16745 at 3512.935 kb on + strand, within IAI46_16745 at 3512.936 kb on - strand, within IAI46_16745 at 3513.090 kb on + strand, within IAI46_16745 at 3513.091 kb on - strand, within IAI46_16745 at 3513.152 kb on + strand, within IAI46_16745 at 3513.153 kb on - strand, within IAI46_16745 at 3513.302 kb on - strand at 3513.727 kb on - strand, within IAI46_16750 at 3513.729 kb on - strand, within IAI46_16750 at 3513.729 kb on - strand, within IAI46_16750 at 3513.777 kb on + strand, within IAI46_16750 at 3513.805 kb on - strand, within IAI46_16750 at 3513.805 kb on - strand, within IAI46_16750 at 3513.806 kb on + strand, within IAI46_16750 at 3513.806 kb on + strand, within IAI46_16750 at 3513.807 kb on - strand, within IAI46_16750 at 3514.160 kb on - strand, within IAI46_16750 at 3514.264 kb on - strand, within IAI46_16750 at 3514.811 kb on + strand at 3514.817 kb on - strand at 3515.234 kb on + strand, within IAI46_16755 at 3515.341 kb on - strand, within IAI46_16755 at 3515.369 kb on - strand, within IAI46_16755 at 3515.540 kb on + strand, within IAI46_16755 at 3515.540 kb on + strand, within IAI46_16755 at 3515.733 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, anaerobic remove 3,512,428 + +0.5 3,512,428 + +1.2 3,512,429 - +2.2 3,512,464 + +0.4 3,512,465 - +0.1 3,512,465 - -0.1 3,512,612 + +0.6 3,512,616 + +0.9 3,512,654 + +1.1 3,512,720 - IAI46_16745 0.10 -0.5 3,512,727 - IAI46_16745 0.11 -0.5 3,512,727 - IAI46_16745 0.11 -0.9 3,512,727 - IAI46_16745 0.11 -0.3 3,512,727 - IAI46_16745 0.11 +0.2 3,512,780 - IAI46_16745 0.19 -0.4 3,512,780 - IAI46_16745 0.19 +0.6 3,512,824 + IAI46_16745 0.25 +0.0 3,512,935 + IAI46_16745 0.41 +0.6 3,512,935 + IAI46_16745 0.41 +0.3 3,512,935 + IAI46_16745 0.41 +0.3 3,512,936 - IAI46_16745 0.41 +0.3 3,513,090 + IAI46_16745 0.63 +0.4 3,513,091 - IAI46_16745 0.63 -0.6 3,513,152 + IAI46_16745 0.71 +0.1 3,513,153 - IAI46_16745 0.71 +1.2 3,513,302 - -0.4 3,513,727 - IAI46_16750 0.26 +0.3 3,513,729 - IAI46_16750 0.26 +0.9 3,513,729 - IAI46_16750 0.26 -0.1 3,513,777 + IAI46_16750 0.29 +0.4 3,513,805 - IAI46_16750 0.31 +0.2 3,513,805 - IAI46_16750 0.31 +1.4 3,513,806 + IAI46_16750 0.31 +1.2 3,513,806 + IAI46_16750 0.31 +0.2 3,513,807 - IAI46_16750 0.31 +0.2 3,514,160 - IAI46_16750 0.55 -0.5 3,514,264 - IAI46_16750 0.63 -0.9 3,514,811 + +0.1 3,514,817 - -2.9 3,515,234 + IAI46_16755 0.46 +0.7 3,515,341 - IAI46_16755 0.57 +1.4 3,515,369 - IAI46_16755 0.60 -1.7 3,515,540 + IAI46_16755 0.79 -1.9 3,515,540 + IAI46_16755 0.79 -0.3 3,515,733 + +0.0
Or see this region's nucleotide sequence