Experiment: dichromate 20 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_15810 and IAI46_15815 are separated by 529 nucleotides IAI46_15815 and IAI46_15820 are separated by 202 nucleotides
IAI46_15810: IAI46_15810 - helix-turn-helix transcriptional regulator, at 3,320,417 to 3,321,283
_15810
IAI46_15815: IAI46_15815 - substrate-binding domain-containing protein, at 3,321,813 to 3,322,823
_15815
IAI46_15820: IAI46_15820 - aryl-sulfate sulfotransferase, at 3,323,026 to 3,324,150
_15820
Position (kb)
3321
3322
3323 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3320.865 kb on + strand, within IAI46_15810 at 3320.931 kb on + strand, within IAI46_15810 at 3320.931 kb on + strand, within IAI46_15810 at 3321.052 kb on + strand, within IAI46_15810 at 3321.063 kb on + strand, within IAI46_15810 at 3321.301 kb on + strand at 3321.302 kb on - strand at 3321.401 kb on + strand at 3321.447 kb on + strand at 3321.447 kb on + strand at 3321.456 kb on + strand at 3321.476 kb on + strand at 3321.477 kb on - strand at 3321.573 kb on + strand at 3321.576 kb on + strand at 3321.579 kb on + strand at 3321.579 kb on + strand at 3321.579 kb on + strand at 3321.601 kb on - strand at 3321.645 kb on + strand at 3321.687 kb on - strand at 3321.724 kb on - strand at 3321.784 kb on + strand at 3321.790 kb on - strand at 3321.903 kb on + strand at 3321.992 kb on - strand, within IAI46_15815 at 3322.020 kb on + strand, within IAI46_15815 at 3322.070 kb on + strand, within IAI46_15815 at 3322.169 kb on - strand, within IAI46_15815 at 3322.171 kb on + strand, within IAI46_15815 at 3322.171 kb on + strand, within IAI46_15815 at 3322.196 kb on + strand, within IAI46_15815 at 3322.196 kb on + strand, within IAI46_15815 at 3322.247 kb on + strand, within IAI46_15815 at 3322.248 kb on - strand, within IAI46_15815 at 3322.248 kb on - strand, within IAI46_15815 at 3322.376 kb on + strand, within IAI46_15815 at 3322.377 kb on - strand, within IAI46_15815 at 3322.377 kb on - strand, within IAI46_15815 at 3322.560 kb on - strand, within IAI46_15815 at 3322.670 kb on - strand, within IAI46_15815 at 3322.697 kb on + strand, within IAI46_15815 at 3322.698 kb on - strand, within IAI46_15815 at 3322.698 kb on - strand, within IAI46_15815 at 3322.737 kb on + strand at 3322.738 kb on - strand at 3322.738 kb on - strand at 3322.738 kb on - strand at 3322.738 kb on - strand at 3322.745 kb on + strand at 3322.750 kb on - strand at 3322.850 kb on + strand at 3322.851 kb on - strand at 3322.851 kb on - strand at 3322.861 kb on + strand at 3322.935 kb on - strand at 3322.959 kb on + strand at 3323.036 kb on + strand at 3323.036 kb on + strand at 3323.037 kb on - strand at 3323.037 kb on - strand at 3323.119 kb on - strand at 3323.284 kb on + strand, within IAI46_15820 at 3323.356 kb on + strand, within IAI46_15820 at 3323.366 kb on + strand, within IAI46_15820 at 3323.366 kb on + strand, within IAI46_15820 at 3323.414 kb on - strand, within IAI46_15820 at 3323.703 kb on + strand, within IAI46_15820 at 3323.788 kb on - strand, within IAI46_15820
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, anaerobic remove 3,320,865 + IAI46_15810 0.52 +0.3 3,320,931 + IAI46_15810 0.59 +1.0 3,320,931 + IAI46_15810 0.59 -0.7 3,321,052 + IAI46_15810 0.73 -1.0 3,321,063 + IAI46_15810 0.75 +0.7 3,321,301 + -0.3 3,321,302 - +0.3 3,321,401 + +0.7 3,321,447 + -0.7 3,321,447 + -1.2 3,321,456 + +0.7 3,321,476 + -0.3 3,321,477 - +0.4 3,321,573 + -0.4 3,321,576 + +1.3 3,321,579 + -0.1 3,321,579 + +0.2 3,321,579 + +0.3 3,321,601 - +0.3 3,321,645 + -0.9 3,321,687 - +0.1 3,321,724 - -0.8 3,321,784 + -0.9 3,321,790 - +0.7 3,321,903 + -0.2 3,321,992 - IAI46_15815 0.18 +1.9 3,322,020 + IAI46_15815 0.20 +1.0 3,322,070 + IAI46_15815 0.25 +0.2 3,322,169 - IAI46_15815 0.35 -1.2 3,322,171 + IAI46_15815 0.35 +0.1 3,322,171 + IAI46_15815 0.35 -0.4 3,322,196 + IAI46_15815 0.38 -0.8 3,322,196 + IAI46_15815 0.38 -1.3 3,322,247 + IAI46_15815 0.43 -0.0 3,322,248 - IAI46_15815 0.43 -0.5 3,322,248 - IAI46_15815 0.43 -0.5 3,322,376 + IAI46_15815 0.56 +0.2 3,322,377 - IAI46_15815 0.56 +0.3 3,322,377 - IAI46_15815 0.56 -0.4 3,322,560 - IAI46_15815 0.74 -0.1 3,322,670 - IAI46_15815 0.85 -0.2 3,322,697 + IAI46_15815 0.87 -0.6 3,322,698 - IAI46_15815 0.88 +0.3 3,322,698 - IAI46_15815 0.88 -0.2 3,322,737 + -0.5 3,322,738 - +0.1 3,322,738 - -1.8 3,322,738 - -0.2 3,322,738 - +0.8 3,322,745 + +0.3 3,322,750 - +0.3 3,322,850 + +0.4 3,322,851 - +0.1 3,322,851 - -0.3 3,322,861 + -0.0 3,322,935 - +0.2 3,322,959 + +0.6 3,323,036 + +0.6 3,323,036 + +0.8 3,323,037 - +0.5 3,323,037 - +0.5 3,323,119 - -0.2 3,323,284 + IAI46_15820 0.23 -0.2 3,323,356 + IAI46_15820 0.29 -0.2 3,323,366 + IAI46_15820 0.30 -0.2 3,323,366 + IAI46_15820 0.30 +0.7 3,323,414 - IAI46_15820 0.34 +0.3 3,323,703 + IAI46_15820 0.60 +1.7 3,323,788 - IAI46_15820 0.68 -0.9
Or see this region's nucleotide sequence