Experiment: dichromate 20 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_15590 and IAI46_15595 are separated by 183 nucleotides IAI46_15595 and IAI46_15600 are separated by 781 nucleotides
IAI46_15590: IAI46_15590 - NAD-dependent epimerase/dehydratase family protein, at 3,268,409 to 3,269,365
_15590
IAI46_15595: IAI46_15595 - winged helix-turn-helix domain-containing protein, at 3,269,549 to 3,270,448
_15595
IAI46_15600: IAI46_15600 - NarK family nitrate/nitrite MFS transporter, at 3,271,230 to 3,272,624
_15600
Position (kb)
3269
3270
3271 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3268.574 kb on + strand, within IAI46_15590 at 3268.602 kb on - strand, within IAI46_15590 at 3268.602 kb on - strand, within IAI46_15590 at 3268.605 kb on + strand, within IAI46_15590 at 3268.619 kb on - strand, within IAI46_15590 at 3268.624 kb on + strand, within IAI46_15590 at 3268.625 kb on - strand, within IAI46_15590 at 3268.710 kb on + strand, within IAI46_15590 at 3268.711 kb on - strand, within IAI46_15590 at 3268.734 kb on + strand, within IAI46_15590 at 3268.764 kb on + strand, within IAI46_15590 at 3268.764 kb on + strand, within IAI46_15590 at 3268.765 kb on - strand, within IAI46_15590 at 3268.780 kb on + strand, within IAI46_15590 at 3268.781 kb on - strand, within IAI46_15590 at 3268.935 kb on + strand, within IAI46_15590 at 3268.936 kb on - strand, within IAI46_15590 at 3269.020 kb on - strand, within IAI46_15590 at 3269.116 kb on - strand, within IAI46_15590 at 3269.116 kb on - strand, within IAI46_15590 at 3269.125 kb on + strand, within IAI46_15590 at 3269.125 kb on + strand, within IAI46_15590 at 3269.125 kb on + strand, within IAI46_15590 at 3269.214 kb on - strand, within IAI46_15590 at 3269.348 kb on + strand at 3269.366 kb on - strand at 3269.387 kb on + strand at 3269.425 kb on + strand at 3269.425 kb on + strand at 3269.488 kb on - strand at 3269.537 kb on + strand at 3270.017 kb on - strand, within IAI46_15595 at 3270.114 kb on - strand, within IAI46_15595 at 3270.211 kb on + strand, within IAI46_15595 at 3270.280 kb on - strand, within IAI46_15595 at 3270.378 kb on - strand at 3270.413 kb on + strand at 3271.077 kb on + strand at 3271.078 kb on - strand at 3271.238 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, anaerobic remove 3,268,574 + IAI46_15590 0.17 -1.3 3,268,602 - IAI46_15590 0.20 +0.2 3,268,602 - IAI46_15590 0.20 -0.9 3,268,605 + IAI46_15590 0.20 -0.0 3,268,619 - IAI46_15590 0.22 +0.1 3,268,624 + IAI46_15590 0.22 +0.8 3,268,625 - IAI46_15590 0.23 -1.4 3,268,710 + IAI46_15590 0.31 -1.6 3,268,711 - IAI46_15590 0.32 -0.4 3,268,734 + IAI46_15590 0.34 -1.0 3,268,764 + IAI46_15590 0.37 +0.9 3,268,764 + IAI46_15590 0.37 -1.0 3,268,765 - IAI46_15590 0.37 +1.4 3,268,780 + IAI46_15590 0.39 -1.8 3,268,781 - IAI46_15590 0.39 -0.9 3,268,935 + IAI46_15590 0.55 -0.2 3,268,936 - IAI46_15590 0.55 +0.1 3,269,020 - IAI46_15590 0.64 -0.6 3,269,116 - IAI46_15590 0.74 -0.0 3,269,116 - IAI46_15590 0.74 +0.6 3,269,125 + IAI46_15590 0.75 +0.0 3,269,125 + IAI46_15590 0.75 +0.7 3,269,125 + IAI46_15590 0.75 +0.2 3,269,214 - IAI46_15590 0.84 +1.1 3,269,348 + -0.0 3,269,366 - -0.2 3,269,387 + +0.2 3,269,425 + -1.2 3,269,425 + +0.2 3,269,488 - +0.3 3,269,537 + +0.1 3,270,017 - IAI46_15595 0.52 -0.5 3,270,114 - IAI46_15595 0.63 -0.1 3,270,211 + IAI46_15595 0.74 -0.4 3,270,280 - IAI46_15595 0.81 +1.0 3,270,378 - +0.8 3,270,413 + -0.6 3,271,077 + +0.7 3,271,078 - +2.0 3,271,238 + +1.2
Or see this region's nucleotide sequence