Experiment: dichromate 20 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_14285 and IAI46_14290 are separated by 102 nucleotides IAI46_14290 and IAI46_14295 are separated by 45 nucleotides IAI46_14295 and IAI46_14300 are separated by 18 nucleotides IAI46_14300 and IAI46_14305 overlap by 4 nucleotides
IAI46_14285: IAI46_14285 - TIGR00730 family Rossman fold protein, at 3,031,697 to 3,032,269
_14285
IAI46_14290: IAI46_14290 - exodeoxyribonuclease III, at 3,032,372 to 3,033,178
_14290
IAI46_14295: IAI46_14295 - pyrimidine (deoxy)nucleoside triphosphate diphosphatase, at 3,033,224 to 3,033,625
_14295
IAI46_14300: IAI46_14300 - YnjH family protein, at 3,033,644 to 3,033,937
_14300
IAI46_14305: IAI46_14305 - DNA topoisomerase III, at 3,033,934 to 3,035,859
_14305
Position (kb)
3033
3034 Strain fitness (log2 ratio)
-1
0
1
2 at 3032.389 kb on + strand at 3032.491 kb on + strand, within IAI46_14290 at 3032.492 kb on - strand, within IAI46_14290 at 3032.519 kb on + strand, within IAI46_14290 at 3032.519 kb on + strand, within IAI46_14290 at 3032.538 kb on - strand, within IAI46_14290 at 3032.696 kb on + strand, within IAI46_14290 at 3032.830 kb on + strand, within IAI46_14290 at 3032.847 kb on - strand, within IAI46_14290 at 3032.966 kb on + strand, within IAI46_14290 at 3033.113 kb on + strand at 3033.434 kb on - strand, within IAI46_14295 at 3033.434 kb on - strand, within IAI46_14295 at 3033.460 kb on + strand, within IAI46_14295 at 3033.465 kb on + strand, within IAI46_14295 at 3033.465 kb on + strand, within IAI46_14295 at 3033.596 kb on + strand at 3033.596 kb on + strand at 3033.597 kb on - strand at 3033.598 kb on + strand at 3033.609 kb on + strand at 3033.766 kb on - strand, within IAI46_14300 at 3034.218 kb on + strand, within IAI46_14305 at 3034.220 kb on + strand, within IAI46_14305 at 3034.221 kb on - strand, within IAI46_14305 at 3034.234 kb on - strand, within IAI46_14305 at 3034.235 kb on + strand, within IAI46_14305 at 3034.514 kb on - strand, within IAI46_14305
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, anaerobic remove 3,032,389 + +0.5 3,032,491 + IAI46_14290 0.15 -0.2 3,032,492 - IAI46_14290 0.15 +0.6 3,032,519 + IAI46_14290 0.18 +0.3 3,032,519 + IAI46_14290 0.18 +0.1 3,032,538 - IAI46_14290 0.21 +0.4 3,032,696 + IAI46_14290 0.40 +0.6 3,032,830 + IAI46_14290 0.57 -0.0 3,032,847 - IAI46_14290 0.59 -0.1 3,032,966 + IAI46_14290 0.74 +0.2 3,033,113 + -0.9 3,033,434 - IAI46_14295 0.52 -0.2 3,033,434 - IAI46_14295 0.52 -1.3 3,033,460 + IAI46_14295 0.59 +0.9 3,033,465 + IAI46_14295 0.60 +1.8 3,033,465 + IAI46_14295 0.60 +0.4 3,033,596 + +0.8 3,033,596 + +0.5 3,033,597 - -0.3 3,033,598 + +0.3 3,033,609 + +0.4 3,033,766 - IAI46_14300 0.41 -0.6 3,034,218 + IAI46_14305 0.15 -1.3 3,034,220 + IAI46_14305 0.15 -0.7 3,034,221 - IAI46_14305 0.15 -1.2 3,034,234 - IAI46_14305 0.16 -0.3 3,034,235 + IAI46_14305 0.16 +0.6 3,034,514 - IAI46_14305 0.30 +1.0
Or see this region's nucleotide sequence