Experiment: dichromate 20 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_14055 and IAI46_14060 are separated by 283 nucleotides IAI46_14060 and IAI46_14065 are separated by 39 nucleotides IAI46_14065 and IAI46_14070 are separated by 107 nucleotides
IAI46_14055: IAI46_14055 - outer membrane protein OmpW, at 2,984,417 to 2,985,061
_14055
IAI46_14060: IAI46_14060 - YkgJ family cysteine cluster protein, at 2,985,345 to 2,985,785
_14060
IAI46_14065: IAI46_14065 - UPF0259 family protein, at 2,985,825 to 2,986,577
_14065
IAI46_14070: IAI46_14070 - IS3 family transposase, at 2,986,685 to 2,987,904
_14070
Position (kb)
2985
2986
2987 Strain fitness (log2 ratio)
-2
-1
0
1 at 2984.870 kb on - strand, within IAI46_14055 at 2984.872 kb on - strand, within IAI46_14055 at 2984.899 kb on + strand, within IAI46_14055 at 2984.902 kb on + strand, within IAI46_14055 at 2984.931 kb on - strand, within IAI46_14055 at 2985.017 kb on - strand at 2985.017 kb on - strand at 2985.038 kb on + strand at 2985.102 kb on - strand at 2985.110 kb on - strand at 2985.120 kb on - strand at 2985.192 kb on + strand at 2985.286 kb on + strand at 2985.322 kb on + strand at 2985.322 kb on + strand at 2985.411 kb on + strand, within IAI46_14060 at 2985.488 kb on + strand, within IAI46_14060 at 2985.564 kb on - strand, within IAI46_14060 at 2985.771 kb on - strand at 2985.771 kb on - strand at 2986.557 kb on + strand at 2986.557 kb on + strand at 2986.558 kb on - strand at 2986.559 kb on + strand at 2986.726 kb on - strand at 2986.822 kb on + strand, within IAI46_14070 at 2986.838 kb on - strand, within IAI46_14070 at 2986.842 kb on - strand, within IAI46_14070 at 2986.900 kb on + strand, within IAI46_14070 at 2987.412 kb on - strand, within IAI46_14070 at 2987.414 kb on + strand, within IAI46_14070 at 2987.414 kb on + strand, within IAI46_14070 at 2987.435 kb on + strand, within IAI46_14070 at 2987.435 kb on + strand, within IAI46_14070 at 2987.436 kb on - strand, within IAI46_14070 at 2987.448 kb on + strand, within IAI46_14070 at 2987.448 kb on + strand, within IAI46_14070 at 2987.455 kb on + strand, within IAI46_14070 at 2987.482 kb on + strand, within IAI46_14070 at 2987.483 kb on - strand, within IAI46_14070
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, anaerobic remove 2,984,870 - IAI46_14055 0.70 -2.5 2,984,872 - IAI46_14055 0.71 -0.7 2,984,899 + IAI46_14055 0.75 -0.7 2,984,902 + IAI46_14055 0.75 -1.5 2,984,931 - IAI46_14055 0.80 -0.3 2,985,017 - -1.7 2,985,017 - +1.2 2,985,038 + -1.1 2,985,102 - -0.1 2,985,110 - +0.1 2,985,120 - +0.5 2,985,192 + -0.6 2,985,286 + +0.5 2,985,322 + +1.0 2,985,322 + +1.1 2,985,411 + IAI46_14060 0.15 +0.4 2,985,488 + IAI46_14060 0.32 +0.3 2,985,564 - IAI46_14060 0.50 -0.4 2,985,771 - +0.3 2,985,771 - -0.6 2,986,557 + -0.5 2,986,557 + +1.0 2,986,558 - +0.3 2,986,559 + +0.4 2,986,726 - +1.3 2,986,822 + IAI46_14070 0.11 +0.9 2,986,838 - IAI46_14070 0.13 -0.4 2,986,842 - IAI46_14070 0.13 +0.2 2,986,900 + IAI46_14070 0.18 -0.9 2,987,412 - IAI46_14070 0.60 -0.7 2,987,414 + IAI46_14070 0.60 +0.2 2,987,414 + IAI46_14070 0.60 -0.4 2,987,435 + IAI46_14070 0.61 -0.4 2,987,435 + IAI46_14070 0.61 +0.6 2,987,436 - IAI46_14070 0.62 +1.0 2,987,448 + IAI46_14070 0.63 +1.0 2,987,448 + IAI46_14070 0.63 -0.8 2,987,455 + IAI46_14070 0.63 +1.2 2,987,482 + IAI46_14070 0.65 +0.0 2,987,483 - IAI46_14070 0.65 +0.2
Or see this region's nucleotide sequence