Experiment: dichromate 20 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_13390 and IAI46_13395 are separated by 60 nucleotides IAI46_13395 and IAI46_13400 are separated by 34 nucleotides IAI46_13400 and IAI46_13405 are separated by 34 nucleotides IAI46_13405 and IAI46_13410 are separated by 59 nucleotides
IAI46_13390: IAI46_13390 - TolC family protein, at 2,861,965 to 2,863,461
_13390
IAI46_13395: IAI46_13395 - copper-translocating P-type ATPase, at 2,863,522 to 2,866,062
_13395
IAI46_13400: IAI46_13400 - glutaredoxin family protein, at 2,866,097 to 2,866,405
_13400
IAI46_13405: IAI46_13405 - Cu(I)-responsive transcriptional regulator, at 2,866,440 to 2,866,940
_13405
IAI46_13410: IAI46_13410 - heavy-metal-associated domain-containing protein, at 2,867,000 to 2,867,200
_13410
Position (kb)
2863
2864
2865
2866
2867 Strain fitness (log2 ratio)
-2
-1
0
1 at 2862.723 kb on - strand, within IAI46_13390 at 2862.911 kb on - strand, within IAI46_13390 at 2862.927 kb on - strand, within IAI46_13390 at 2863.107 kb on - strand, within IAI46_13390 at 2863.147 kb on + strand, within IAI46_13390 at 2863.148 kb on - strand, within IAI46_13390 at 2863.150 kb on - strand, within IAI46_13390 at 2863.253 kb on - strand, within IAI46_13390 at 2863.348 kb on + strand at 2863.351 kb on - strand at 2863.380 kb on + strand at 2863.380 kb on + strand at 2863.380 kb on + strand at 2863.507 kb on + strand at 2863.507 kb on + strand at 2863.551 kb on + strand at 2863.551 kb on + strand at 2863.552 kb on - strand at 2863.597 kb on - strand at 2863.638 kb on - strand at 2863.797 kb on + strand, within IAI46_13395 at 2863.962 kb on + strand, within IAI46_13395 at 2863.963 kb on - strand, within IAI46_13395 at 2864.042 kb on + strand, within IAI46_13395 at 2864.184 kb on + strand, within IAI46_13395 at 2864.184 kb on + strand, within IAI46_13395 at 2864.299 kb on + strand, within IAI46_13395 at 2864.300 kb on - strand, within IAI46_13395 at 2864.608 kb on + strand, within IAI46_13395 at 2864.609 kb on - strand, within IAI46_13395 at 2864.609 kb on - strand, within IAI46_13395 at 2864.609 kb on - strand, within IAI46_13395 at 2864.613 kb on - strand, within IAI46_13395 at 2864.613 kb on - strand, within IAI46_13395 at 2865.050 kb on + strand, within IAI46_13395 at 2865.146 kb on - strand, within IAI46_13395 at 2865.287 kb on + strand, within IAI46_13395 at 2865.288 kb on - strand, within IAI46_13395 at 2865.415 kb on + strand, within IAI46_13395 at 2865.416 kb on - strand, within IAI46_13395 at 2865.743 kb on + strand, within IAI46_13395 at 2866.052 kb on + strand at 2866.131 kb on - strand, within IAI46_13400 at 2866.131 kb on - strand, within IAI46_13400 at 2866.257 kb on + strand, within IAI46_13400 at 2866.258 kb on - strand, within IAI46_13400 at 2866.258 kb on - strand, within IAI46_13400 at 2866.258 kb on - strand, within IAI46_13400 at 2866.258 kb on - strand, within IAI46_13400 at 2866.258 kb on - strand, within IAI46_13400 at 2866.258 kb on - strand, within IAI46_13400 at 2866.261 kb on + strand, within IAI46_13400 at 2866.307 kb on + strand, within IAI46_13400 at 2866.413 kb on + strand at 2866.497 kb on + strand, within IAI46_13405 at 2866.554 kb on + strand, within IAI46_13405 at 2866.570 kb on + strand, within IAI46_13405 at 2866.570 kb on + strand, within IAI46_13405 at 2866.570 kb on + strand, within IAI46_13405 at 2866.571 kb on - strand, within IAI46_13405 at 2866.586 kb on + strand, within IAI46_13405 at 2866.680 kb on - strand, within IAI46_13405 at 2866.886 kb on + strand, within IAI46_13405 at 2866.887 kb on - strand, within IAI46_13405 at 2866.999 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, anaerobic remove 2,862,723 - IAI46_13390 0.51 +0.5 2,862,911 - IAI46_13390 0.63 -1.1 2,862,927 - IAI46_13390 0.64 -0.3 2,863,107 - IAI46_13390 0.76 -0.0 2,863,147 + IAI46_13390 0.79 -1.5 2,863,148 - IAI46_13390 0.79 -0.2 2,863,150 - IAI46_13390 0.79 +1.6 2,863,253 - IAI46_13390 0.86 -0.1 2,863,348 + +0.7 2,863,351 - +0.6 2,863,380 + -0.5 2,863,380 + -1.5 2,863,380 + -0.1 2,863,507 + +1.0 2,863,507 + +0.2 2,863,551 + -0.6 2,863,551 + +0.6 2,863,552 - +0.7 2,863,597 - -0.9 2,863,638 - +0.2 2,863,797 + IAI46_13395 0.11 -0.4 2,863,962 + IAI46_13395 0.17 -1.9 2,863,963 - IAI46_13395 0.17 -1.8 2,864,042 + IAI46_13395 0.20 +0.7 2,864,184 + IAI46_13395 0.26 +1.3 2,864,184 + IAI46_13395 0.26 +0.2 2,864,299 + IAI46_13395 0.31 -0.3 2,864,300 - IAI46_13395 0.31 +0.2 2,864,608 + IAI46_13395 0.43 +0.1 2,864,609 - IAI46_13395 0.43 -0.0 2,864,609 - IAI46_13395 0.43 +0.0 2,864,609 - IAI46_13395 0.43 +0.3 2,864,613 - IAI46_13395 0.43 -1.1 2,864,613 - IAI46_13395 0.43 -0.1 2,865,050 + IAI46_13395 0.60 +0.7 2,865,146 - IAI46_13395 0.64 +0.1 2,865,287 + IAI46_13395 0.69 +1.0 2,865,288 - IAI46_13395 0.70 -0.2 2,865,415 + IAI46_13395 0.74 +0.4 2,865,416 - IAI46_13395 0.75 -0.2 2,865,743 + IAI46_13395 0.87 +0.3 2,866,052 + +0.1 2,866,131 - IAI46_13400 0.11 -0.1 2,866,131 - IAI46_13400 0.11 -1.1 2,866,257 + IAI46_13400 0.52 -0.4 2,866,258 - IAI46_13400 0.52 +0.1 2,866,258 - IAI46_13400 0.52 +0.9 2,866,258 - IAI46_13400 0.52 +0.7 2,866,258 - IAI46_13400 0.52 -0.7 2,866,258 - IAI46_13400 0.52 -1.3 2,866,258 - IAI46_13400 0.52 +0.6 2,866,261 + IAI46_13400 0.53 -0.1 2,866,307 + IAI46_13400 0.68 +0.9 2,866,413 + -0.9 2,866,497 + IAI46_13405 0.11 +0.4 2,866,554 + IAI46_13405 0.23 +0.3 2,866,570 + IAI46_13405 0.26 -0.3 2,866,570 + IAI46_13405 0.26 +0.1 2,866,570 + IAI46_13405 0.26 +0.2 2,866,571 - IAI46_13405 0.26 +0.3 2,866,586 + IAI46_13405 0.29 +0.3 2,866,680 - IAI46_13405 0.48 +0.2 2,866,886 + IAI46_13405 0.89 +0.1 2,866,887 - IAI46_13405 0.89 +0.7 2,866,999 + -0.4
Or see this region's nucleotide sequence