Experiment: dichromate 20 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_13200 and IAI46_13205 are separated by 12 nucleotides IAI46_13205 and IAI46_13210 are separated by 22 nucleotides
IAI46_13200: IAI46_13200 - sugar ABC transporter permease, at 2,816,558 to 2,817,496
_13200
IAI46_13205: IAI46_13205 - carbohydrate ABC transporter permease, at 2,817,509 to 2,818,327
_13205
IAI46_13210: IAI46_13210 - sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC, at 2,818,350 to 2,819,462
_13210
Position (kb)
2817
2818
2819 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2816.576 kb on + strand at 2816.577 kb on - strand at 2816.577 kb on - strand at 2816.668 kb on - strand, within IAI46_13200 at 2816.696 kb on + strand, within IAI46_13200 at 2816.779 kb on + strand, within IAI46_13200 at 2816.783 kb on + strand, within IAI46_13200 at 2816.784 kb on - strand, within IAI46_13200 at 2816.784 kb on - strand, within IAI46_13200 at 2816.840 kb on + strand, within IAI46_13200 at 2816.840 kb on + strand, within IAI46_13200 at 2816.841 kb on - strand, within IAI46_13200 at 2817.020 kb on - strand, within IAI46_13200 at 2817.043 kb on + strand, within IAI46_13200 at 2817.106 kb on + strand, within IAI46_13200 at 2817.106 kb on + strand, within IAI46_13200 at 2817.106 kb on + strand, within IAI46_13200 at 2817.107 kb on - strand, within IAI46_13200 at 2817.226 kb on + strand, within IAI46_13200 at 2817.227 kb on - strand, within IAI46_13200 at 2817.227 kb on - strand, within IAI46_13200 at 2817.371 kb on + strand, within IAI46_13200 at 2817.378 kb on - strand, within IAI46_13200 at 2817.386 kb on + strand, within IAI46_13200 at 2817.516 kb on + strand at 2817.516 kb on + strand at 2817.517 kb on - strand at 2817.521 kb on - strand at 2817.622 kb on + strand, within IAI46_13205 at 2817.947 kb on - strand, within IAI46_13205 at 2817.950 kb on + strand, within IAI46_13205 at 2818.025 kb on + strand, within IAI46_13205 at 2818.286 kb on + strand at 2818.342 kb on + strand at 2818.347 kb on - strand at 2818.385 kb on - strand at 2818.385 kb on - strand at 2818.430 kb on + strand at 2818.431 kb on - strand at 2818.431 kb on - strand at 2818.602 kb on + strand, within IAI46_13210 at 2818.629 kb on + strand, within IAI46_13210 at 2818.929 kb on + strand, within IAI46_13210 at 2818.930 kb on - strand, within IAI46_13210 at 2819.001 kb on - strand, within IAI46_13210 at 2819.021 kb on + strand, within IAI46_13210 at 2819.121 kb on - strand, within IAI46_13210
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, anaerobic remove 2,816,576 + -0.1 2,816,577 - -1.2 2,816,577 - +0.2 2,816,668 - IAI46_13200 0.12 -0.2 2,816,696 + IAI46_13200 0.15 +0.9 2,816,779 + IAI46_13200 0.24 -1.4 2,816,783 + IAI46_13200 0.24 -0.0 2,816,784 - IAI46_13200 0.24 -1.4 2,816,784 - IAI46_13200 0.24 -0.4 2,816,840 + IAI46_13200 0.30 +0.4 2,816,840 + IAI46_13200 0.30 +1.3 2,816,841 - IAI46_13200 0.30 +0.2 2,817,020 - IAI46_13200 0.49 -0.4 2,817,043 + IAI46_13200 0.52 +0.6 2,817,106 + IAI46_13200 0.58 +0.2 2,817,106 + IAI46_13200 0.58 -0.5 2,817,106 + IAI46_13200 0.58 +0.9 2,817,107 - IAI46_13200 0.58 +0.5 2,817,226 + IAI46_13200 0.71 +0.1 2,817,227 - IAI46_13200 0.71 -0.1 2,817,227 - IAI46_13200 0.71 +0.1 2,817,371 + IAI46_13200 0.87 +0.1 2,817,378 - IAI46_13200 0.87 -0.6 2,817,386 + IAI46_13200 0.88 -0.5 2,817,516 + +1.0 2,817,516 + +1.6 2,817,517 - +0.5 2,817,521 - -0.4 2,817,622 + IAI46_13205 0.14 +0.1 2,817,947 - IAI46_13205 0.53 -0.2 2,817,950 + IAI46_13205 0.54 +1.6 2,818,025 + IAI46_13205 0.63 +0.0 2,818,286 + -0.1 2,818,342 + +2.2 2,818,347 - +1.4 2,818,385 - +0.8 2,818,385 - -2.0 2,818,430 + -1.6 2,818,431 - -0.1 2,818,431 - +0.1 2,818,602 + IAI46_13210 0.23 +0.6 2,818,629 + IAI46_13210 0.25 -0.7 2,818,929 + IAI46_13210 0.52 +0.5 2,818,930 - IAI46_13210 0.52 -0.3 2,819,001 - IAI46_13210 0.58 +0.4 2,819,021 + IAI46_13210 0.60 -0.2 2,819,121 - IAI46_13210 0.69 +1.0
Or see this region's nucleotide sequence