Experiment: dichromate 20 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_13160 and IAI46_13165 overlap by 4 nucleotides IAI46_13165 and IAI46_13170 are separated by 3 nucleotides IAI46_13170 and IAI46_13175 are separated by 41 nucleotides IAI46_13175 and IAI46_13180 are separated by 73 nucleotides
IAI46_13160: IAI46_13160 - hypothetical protein, at 2,807,684 to 2,807,941
_13160
IAI46_13165: IAI46_13165 - glutamine amidotransferase, at 2,807,938 to 2,808,651
_13165
IAI46_13170: IAI46_13170 - pyridoxal kinase, at 2,808,655 to 2,809,494
_13170
IAI46_13175: IAI46_13175 - flagellar brake protein, at 2,809,536 to 2,810,249
_13175
IAI46_13180: IAI46_13180 - N-formylglutamate amidohydrolase, at 2,810,323 to 2,811,105
_13180
Position (kb)
2808
2809
2810 Strain fitness (log2 ratio)
-1
0
1
2 at 2807.700 kb on + strand at 2807.711 kb on - strand, within IAI46_13160 at 2807.711 kb on - strand, within IAI46_13160 at 2807.711 kb on - strand, within IAI46_13160 at 2807.821 kb on + strand, within IAI46_13160 at 2807.822 kb on - strand, within IAI46_13160 at 2807.847 kb on + strand, within IAI46_13160 at 2807.848 kb on - strand, within IAI46_13160 at 2807.891 kb on - strand, within IAI46_13160 at 2808.142 kb on + strand, within IAI46_13165 at 2808.165 kb on - strand, within IAI46_13165 at 2808.287 kb on - strand, within IAI46_13165 at 2808.369 kb on + strand, within IAI46_13165 at 2808.376 kb on - strand, within IAI46_13165 at 2808.415 kb on - strand, within IAI46_13165 at 2808.612 kb on - strand at 2808.652 kb on + strand at 2808.721 kb on + strand at 2808.722 kb on - strand at 2808.722 kb on - strand at 2808.817 kb on + strand, within IAI46_13170 at 2808.818 kb on - strand, within IAI46_13170 at 2808.820 kb on + strand, within IAI46_13170 at 2808.821 kb on - strand, within IAI46_13170 at 2808.972 kb on - strand, within IAI46_13170 at 2809.010 kb on - strand, within IAI46_13170 at 2809.011 kb on + strand, within IAI46_13170 at 2809.048 kb on + strand, within IAI46_13170 at 2809.048 kb on + strand, within IAI46_13170 at 2809.049 kb on - strand, within IAI46_13170 at 2809.302 kb on + strand, within IAI46_13170 at 2809.846 kb on + strand, within IAI46_13175 at 2809.865 kb on - strand, within IAI46_13175 at 2810.050 kb on + strand, within IAI46_13175 at 2810.050 kb on + strand, within IAI46_13175 at 2810.223 kb on - strand at 2810.435 kb on + strand, within IAI46_13180 at 2810.474 kb on + strand, within IAI46_13180 at 2810.475 kb on - strand, within IAI46_13180 at 2810.475 kb on - strand, within IAI46_13180
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, anaerobic remove 2,807,700 + +1.5 2,807,711 - IAI46_13160 0.10 +0.4 2,807,711 - IAI46_13160 0.10 -0.4 2,807,711 - IAI46_13160 0.10 -0.8 2,807,821 + IAI46_13160 0.53 +0.1 2,807,822 - IAI46_13160 0.53 +0.8 2,807,847 + IAI46_13160 0.63 -0.1 2,807,848 - IAI46_13160 0.64 -0.4 2,807,891 - IAI46_13160 0.80 -0.3 2,808,142 + IAI46_13165 0.29 +0.7 2,808,165 - IAI46_13165 0.32 -0.0 2,808,287 - IAI46_13165 0.49 -0.6 2,808,369 + IAI46_13165 0.60 +0.2 2,808,376 - IAI46_13165 0.61 +0.5 2,808,415 - IAI46_13165 0.67 -0.5 2,808,612 - -0.1 2,808,652 + -1.1 2,808,721 + +1.1 2,808,722 - -0.8 2,808,722 - -0.8 2,808,817 + IAI46_13170 0.19 -0.9 2,808,818 - IAI46_13170 0.19 -1.7 2,808,820 + IAI46_13170 0.20 +2.1 2,808,821 - IAI46_13170 0.20 +0.0 2,808,972 - IAI46_13170 0.38 +1.2 2,809,010 - IAI46_13170 0.42 -0.6 2,809,011 + IAI46_13170 0.42 +0.1 2,809,048 + IAI46_13170 0.47 -0.0 2,809,048 + IAI46_13170 0.47 +0.6 2,809,049 - IAI46_13170 0.47 -0.8 2,809,302 + IAI46_13170 0.77 -0.5 2,809,846 + IAI46_13175 0.43 -1.1 2,809,865 - IAI46_13175 0.46 -0.2 2,810,050 + IAI46_13175 0.72 -0.5 2,810,050 + IAI46_13175 0.72 -1.2 2,810,223 - -0.2 2,810,435 + IAI46_13180 0.14 +0.2 2,810,474 + IAI46_13180 0.19 +0.2 2,810,475 - IAI46_13180 0.19 +1.0 2,810,475 - IAI46_13180 0.19 -1.3
Or see this region's nucleotide sequence