Experiment: dichromate 20 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_12905 and IAI46_12910 are separated by 210 nucleotides IAI46_12910 and IAI46_12915 are separated by 14 nucleotides IAI46_12915 and IAI46_12920 are separated by 112 nucleotides
IAI46_12905: IAI46_12905 - D-serine ammonia-lyase, at 2,751,815 to 2,753,152
_12905
IAI46_12910: IAI46_12910 - VOC family protein, at 2,753,363 to 2,753,833
_12910
IAI46_12915: IAI46_12915 - DUF1428 family protein, at 2,753,848 to 2,754,201
_12915
IAI46_12920: IAI46_12920 - diguanylate cyclase, at 2,754,314 to 2,755,756
_12920
Position (kb)
2753
2754
2755 Strain fitness (log2 ratio)
-2
-1
0
1 at 2752.959 kb on - strand, within IAI46_12905 at 2753.007 kb on - strand, within IAI46_12905 at 2753.007 kb on - strand, within IAI46_12905 at 2753.361 kb on + strand at 2753.365 kb on - strand at 2753.659 kb on - strand, within IAI46_12910 at 2753.813 kb on + strand at 2753.814 kb on - strand at 2753.814 kb on - strand at 2753.985 kb on - strand, within IAI46_12915 at 2754.142 kb on + strand, within IAI46_12915 at 2754.147 kb on - strand, within IAI46_12915 at 2754.325 kb on + strand at 2754.326 kb on - strand at 2754.327 kb on + strand at 2754.629 kb on + strand, within IAI46_12920 at 2754.709 kb on + strand, within IAI46_12920 at 2754.710 kb on - strand, within IAI46_12920 at 2754.803 kb on + strand, within IAI46_12920 at 2754.803 kb on + strand, within IAI46_12920 at 2754.803 kb on + strand, within IAI46_12920 at 2754.804 kb on - strand, within IAI46_12920 at 2754.934 kb on + strand, within IAI46_12920 at 2754.935 kb on - strand, within IAI46_12920 at 2755.004 kb on + strand, within IAI46_12920 at 2755.004 kb on + strand, within IAI46_12920 at 2755.004 kb on + strand, within IAI46_12920 at 2755.004 kb on + strand, within IAI46_12920 at 2755.005 kb on - strand, within IAI46_12920 at 2755.005 kb on - strand, within IAI46_12920 at 2755.005 kb on - strand, within IAI46_12920 at 2755.160 kb on - strand, within IAI46_12920
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, anaerobic remove 2,752,959 - IAI46_12905 0.86 +0.1 2,753,007 - IAI46_12905 0.89 -2.0 2,753,007 - IAI46_12905 0.89 +0.0 2,753,361 + -0.1 2,753,365 - +1.3 2,753,659 - IAI46_12910 0.63 -1.1 2,753,813 + +1.2 2,753,814 - +1.7 2,753,814 - +1.1 2,753,985 - IAI46_12915 0.39 +0.9 2,754,142 + IAI46_12915 0.83 +0.4 2,754,147 - IAI46_12915 0.84 -0.4 2,754,325 + +0.1 2,754,326 - -0.6 2,754,327 + +0.8 2,754,629 + IAI46_12920 0.22 -0.0 2,754,709 + IAI46_12920 0.27 +0.4 2,754,710 - IAI46_12920 0.27 +0.5 2,754,803 + IAI46_12920 0.34 +0.8 2,754,803 + IAI46_12920 0.34 +0.2 2,754,803 + IAI46_12920 0.34 +1.0 2,754,804 - IAI46_12920 0.34 -1.0 2,754,934 + IAI46_12920 0.43 +1.0 2,754,935 - IAI46_12920 0.43 +0.5 2,755,004 + IAI46_12920 0.48 -0.4 2,755,004 + IAI46_12920 0.48 -1.1 2,755,004 + IAI46_12920 0.48 -0.2 2,755,004 + IAI46_12920 0.48 -1.3 2,755,005 - IAI46_12920 0.48 -0.1 2,755,005 - IAI46_12920 0.48 -0.3 2,755,005 - IAI46_12920 0.48 +0.7 2,755,160 - IAI46_12920 0.59 -1.0
Or see this region's nucleotide sequence