Experiment: dichromate 20 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_12650 and IAI46_12655 are separated by 130 nucleotides IAI46_12655 and IAI46_12660 are separated by 85 nucleotides IAI46_12660 and IAI46_12665 are separated by 5 nucleotides
IAI46_12650: IAI46_12650 - TonB-dependent copper receptor, at 2,688,450 to 2,690,510
_12650
IAI46_12655: IAI46_12655 - LysR family transcriptional regulator, at 2,690,641 to 2,691,537
_12655
IAI46_12660: IAI46_12660 - NAD(P)H-dependent oxidoreductase, at 2,691,623 to 2,692,396
_12660
IAI46_12665: IAI46_12665 - aldehyde dehydrogenase family protein, at 2,692,402 to 2,692,770
_12665
Position (kb)
2690
2691
2692 Strain fitness (log2 ratio)
-1
0
1
2 at 2689.698 kb on + strand, within IAI46_12650 at 2689.715 kb on + strand, within IAI46_12650 at 2689.748 kb on + strand, within IAI46_12650 at 2689.827 kb on + strand, within IAI46_12650 at 2689.932 kb on - strand, within IAI46_12650 at 2689.946 kb on + strand, within IAI46_12650 at 2689.965 kb on + strand, within IAI46_12650 at 2689.988 kb on + strand, within IAI46_12650 at 2689.988 kb on + strand, within IAI46_12650 at 2689.988 kb on + strand, within IAI46_12650 at 2690.343 kb on - strand at 2690.344 kb on - strand at 2690.426 kb on + strand at 2690.426 kb on + strand at 2690.427 kb on - strand at 2690.454 kb on - strand at 2690.509 kb on - strand at 2690.531 kb on + strand at 2690.531 kb on + strand at 2690.531 kb on + strand at 2690.605 kb on - strand at 2690.636 kb on + strand at 2690.637 kb on - strand at 2690.637 kb on - strand at 2690.643 kb on - strand at 2690.660 kb on - strand at 2690.662 kb on - strand at 2690.713 kb on + strand at 2690.714 kb on - strand at 2690.714 kb on - strand at 2690.714 kb on - strand at 2691.024 kb on - strand, within IAI46_12655 at 2691.024 kb on - strand, within IAI46_12655 at 2691.095 kb on - strand, within IAI46_12655 at 2691.243 kb on + strand, within IAI46_12655 at 2691.550 kb on - strand at 2691.572 kb on + strand at 2691.589 kb on + strand at 2691.666 kb on + strand at 2691.667 kb on - strand at 2691.859 kb on + strand, within IAI46_12660 at 2692.145 kb on - strand, within IAI46_12660 at 2692.323 kb on - strand at 2692.388 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, anaerobic remove 2,689,698 + IAI46_12650 0.61 +0.2 2,689,715 + IAI46_12650 0.61 +0.9 2,689,748 + IAI46_12650 0.63 +0.5 2,689,827 + IAI46_12650 0.67 +0.2 2,689,932 - IAI46_12650 0.72 -0.3 2,689,946 + IAI46_12650 0.73 +0.4 2,689,965 + IAI46_12650 0.74 +2.0 2,689,988 + IAI46_12650 0.75 -1.2 2,689,988 + IAI46_12650 0.75 -0.2 2,689,988 + IAI46_12650 0.75 -0.7 2,690,343 - +0.6 2,690,344 - +1.0 2,690,426 + +0.3 2,690,426 + +0.7 2,690,427 - -0.2 2,690,454 - +0.5 2,690,509 - +0.3 2,690,531 + +2.0 2,690,531 + +1.6 2,690,531 + -0.2 2,690,605 - -0.4 2,690,636 + -0.3 2,690,637 - -0.6 2,690,637 - +0.2 2,690,643 - +0.2 2,690,660 - +0.2 2,690,662 - -0.6 2,690,713 + +0.7 2,690,714 - -0.3 2,690,714 - -0.4 2,690,714 - -0.4 2,691,024 - IAI46_12655 0.43 -0.5 2,691,024 - IAI46_12655 0.43 +0.7 2,691,095 - IAI46_12655 0.51 -0.4 2,691,243 + IAI46_12655 0.67 +0.6 2,691,550 - -0.4 2,691,572 + -0.4 2,691,589 + +1.4 2,691,666 + +2.0 2,691,667 - -0.2 2,691,859 + IAI46_12660 0.30 +0.6 2,692,145 - IAI46_12660 0.67 +0.8 2,692,323 - -0.5 2,692,388 - +1.2
Or see this region's nucleotide sequence