Experiment: dichromate 20 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_11480 and IAI46_11485 overlap by 8 nucleotides IAI46_11485 and IAI46_11490 overlap by 1 nucleotides IAI46_11490 and IAI46_11495 are separated by 144 nucleotides IAI46_11495 and IAI46_11500 are separated by 159 nucleotides
IAI46_11480: IAI46_11480 - electron transport complex subunit RsxC, at 2,422,307 to 2,424,652
_11480
IAI46_11485: IAI46_11485 - electron transport complex subunit RsxB, at 2,424,645 to 2,425,217
_11485
IAI46_11490: IAI46_11490 - electron transport complex subunit RsxA, at 2,425,217 to 2,425,798
_11490
IAI46_11495: IAI46_11495 - DUF2569 domain-containing protein, at 2,425,943 to 2,426,383
_11495
IAI46_11500: IAI46_11500 - L-arabinose isomerase, at 2,426,543 to 2,428,048
_11500
Position (kb)
2425
2426 Strain fitness (log2 ratio)
-1
0
1
2 at 2424.330 kb on - strand, within IAI46_11480 at 2424.330 kb on - strand, within IAI46_11480 at 2424.646 kb on + strand at 2424.741 kb on - strand, within IAI46_11485 at 2424.890 kb on + strand, within IAI46_11485 at 2424.893 kb on - strand, within IAI46_11485 at 2425.501 kb on - strand, within IAI46_11490 at 2425.588 kb on - strand, within IAI46_11490 at 2425.588 kb on - strand, within IAI46_11490 at 2425.613 kb on - strand, within IAI46_11490 at 2425.664 kb on - strand, within IAI46_11490 at 2425.664 kb on - strand, within IAI46_11490 at 2425.667 kb on - strand, within IAI46_11490 at 2425.763 kb on + strand at 2425.881 kb on - strand at 2425.987 kb on + strand, within IAI46_11495 at 2425.987 kb on + strand, within IAI46_11495 at 2425.987 kb on + strand, within IAI46_11495 at 2425.987 kb on + strand, within IAI46_11495 at 2425.988 kb on - strand, within IAI46_11495 at 2425.988 kb on - strand, within IAI46_11495 at 2425.990 kb on - strand, within IAI46_11495 at 2425.990 kb on - strand, within IAI46_11495 at 2426.037 kb on - strand, within IAI46_11495 at 2426.091 kb on - strand, within IAI46_11495 at 2426.170 kb on + strand, within IAI46_11495 at 2426.208 kb on + strand, within IAI46_11495 at 2426.209 kb on - strand, within IAI46_11495 at 2426.216 kb on + strand, within IAI46_11495 at 2426.247 kb on + strand, within IAI46_11495 at 2426.328 kb on + strand, within IAI46_11495 at 2426.360 kb on - strand at 2426.360 kb on - strand at 2426.383 kb on + strand at 2426.460 kb on + strand at 2426.521 kb on + strand at 2426.566 kb on - strand at 2426.566 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, anaerobic remove 2,424,330 - IAI46_11480 0.86 +0.1 2,424,330 - IAI46_11480 0.86 +0.3 2,424,646 + -0.8 2,424,741 - IAI46_11485 0.17 +0.2 2,424,890 + IAI46_11485 0.43 -0.6 2,424,893 - IAI46_11485 0.43 -0.7 2,425,501 - IAI46_11490 0.49 +0.3 2,425,588 - IAI46_11490 0.64 +0.5 2,425,588 - IAI46_11490 0.64 -0.3 2,425,613 - IAI46_11490 0.68 -0.1 2,425,664 - IAI46_11490 0.77 +0.2 2,425,664 - IAI46_11490 0.77 +0.2 2,425,667 - IAI46_11490 0.77 +0.2 2,425,763 + -1.4 2,425,881 - +0.7 2,425,987 + IAI46_11495 0.10 -0.7 2,425,987 + IAI46_11495 0.10 -1.0 2,425,987 + IAI46_11495 0.10 -0.2 2,425,987 + IAI46_11495 0.10 +0.5 2,425,988 - IAI46_11495 0.10 -1.5 2,425,988 - IAI46_11495 0.10 -0.3 2,425,990 - IAI46_11495 0.11 -0.3 2,425,990 - IAI46_11495 0.11 -0.9 2,426,037 - IAI46_11495 0.21 +0.2 2,426,091 - IAI46_11495 0.34 -0.8 2,426,170 + IAI46_11495 0.51 -0.8 2,426,208 + IAI46_11495 0.60 +0.2 2,426,209 - IAI46_11495 0.60 +0.7 2,426,216 + IAI46_11495 0.62 -0.5 2,426,247 + IAI46_11495 0.69 -1.1 2,426,328 + IAI46_11495 0.87 -0.8 2,426,360 - -0.1 2,426,360 - +1.9 2,426,383 + +0.1 2,426,460 + +0.7 2,426,521 + -0.2 2,426,566 - +0.2 2,426,566 - -0.3
Or see this region's nucleotide sequence