Experiment: dichromate 20 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_11290 and IAI46_11295 are separated by 150 nucleotides IAI46_11295 and IAI46_11300 are separated by 141 nucleotides
IAI46_11290: IAI46_11290 - phosphoethanolamine transferase EptA, at 2,381,804 to 2,383,441
_11290
IAI46_11295: IAI46_11295 - NAD(P)-dependent oxidoreductase, at 2,383,592 to 2,384,233
_11295
IAI46_11300: IAI46_11300 - LysR family transcriptional regulator, at 2,384,375 to 2,385,304
_11300
Position (kb)
2383
2384
2385 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2382.629 kb on - strand, within IAI46_11290 at 2382.633 kb on + strand, within IAI46_11290 at 2382.832 kb on + strand, within IAI46_11290 at 2382.882 kb on - strand, within IAI46_11290 at 2382.913 kb on - strand, within IAI46_11290 at 2382.994 kb on - strand, within IAI46_11290 at 2383.162 kb on - strand, within IAI46_11290 at 2383.176 kb on + strand, within IAI46_11290 at 2383.176 kb on + strand, within IAI46_11290 at 2383.177 kb on - strand, within IAI46_11290 at 2383.332 kb on + strand at 2383.332 kb on + strand at 2383.345 kb on + strand at 2383.346 kb on - strand at 2383.465 kb on - strand at 2383.465 kb on - strand at 2383.468 kb on + strand at 2383.591 kb on - strand at 2383.596 kb on + strand at 2383.597 kb on - strand at 2383.679 kb on - strand, within IAI46_11295 at 2383.805 kb on + strand, within IAI46_11295 at 2383.805 kb on + strand, within IAI46_11295 at 2383.806 kb on - strand, within IAI46_11295 at 2384.024 kb on - strand, within IAI46_11295 at 2384.025 kb on + strand, within IAI46_11295 at 2384.225 kb on + strand at 2384.251 kb on + strand at 2384.298 kb on + strand at 2384.298 kb on + strand at 2384.299 kb on - strand at 2384.302 kb on + strand at 2384.330 kb on + strand at 2384.330 kb on + strand at 2384.330 kb on + strand at 2384.331 kb on - strand at 2384.331 kb on - strand at 2384.331 kb on - strand at 2384.338 kb on + strand at 2384.774 kb on - strand, within IAI46_11300 at 2385.005 kb on - strand, within IAI46_11300
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, anaerobic remove 2,382,629 - IAI46_11290 0.50 -1.2 2,382,633 + IAI46_11290 0.51 +1.9 2,382,832 + IAI46_11290 0.63 +1.3 2,382,882 - IAI46_11290 0.66 +0.2 2,382,913 - IAI46_11290 0.68 -0.3 2,382,994 - IAI46_11290 0.73 -0.4 2,383,162 - IAI46_11290 0.83 +1.9 2,383,176 + IAI46_11290 0.84 +1.3 2,383,176 + IAI46_11290 0.84 +0.5 2,383,177 - IAI46_11290 0.84 +0.5 2,383,332 + +0.1 2,383,332 + -0.7 2,383,345 + +0.4 2,383,346 - +0.1 2,383,465 - -0.0 2,383,465 - -1.3 2,383,468 + -0.5 2,383,591 - -1.0 2,383,596 + +0.0 2,383,597 - +0.5 2,383,679 - IAI46_11295 0.14 +1.5 2,383,805 + IAI46_11295 0.33 -0.1 2,383,805 + IAI46_11295 0.33 +0.3 2,383,806 - IAI46_11295 0.33 +0.0 2,384,024 - IAI46_11295 0.67 +0.7 2,384,025 + IAI46_11295 0.67 +0.6 2,384,225 + -0.6 2,384,251 + -1.5 2,384,298 + +1.3 2,384,298 + +0.8 2,384,299 - +0.6 2,384,302 + +0.5 2,384,330 + -2.1 2,384,330 + +0.7 2,384,330 + +0.5 2,384,331 - -0.2 2,384,331 - +0.0 2,384,331 - -0.3 2,384,338 + +0.7 2,384,774 - IAI46_11300 0.43 +0.2 2,385,005 - IAI46_11300 0.68 +0.0
Or see this region's nucleotide sequence