Experiment: dichromate 20 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_10985 and IAI46_10990 are separated by 4 nucleotides IAI46_10990 and IAI46_10995 are separated by 567 nucleotides IAI46_10995 and IAI46_11000 are separated by 173 nucleotides
IAI46_10985: IAI46_10985 - phenylalanine--tRNA ligase subunit beta, at 2,320,186 to 2,322,573
_10985
IAI46_10990: IAI46_10990 - integration host factor subunit alpha, at 2,322,578 to 2,322,874
_10990
IAI46_10995: IAI46_10995 - DUF2502 domain-containing protein, at 2,323,442 to 2,323,861
_10995
IAI46_11000: IAI46_11000 - vitamin B12 ABC transporter permease BtuC, at 2,324,035 to 2,325,042
_11000
Position (kb)
2323
2324 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2322.873 kb on - strand at 2323.134 kb on - strand at 2323.244 kb on + strand at 2323.569 kb on - strand, within IAI46_10995 at 2323.571 kb on + strand, within IAI46_10995 at 2323.571 kb on + strand, within IAI46_10995 at 2323.869 kb on + strand at 2323.870 kb on - strand at 2323.870 kb on - strand at 2323.973 kb on + strand at 2323.993 kb on + strand at 2324.035 kb on - strand at 2324.060 kb on + strand at 2324.100 kb on - strand at 2324.322 kb on - strand, within IAI46_11000 at 2324.366 kb on + strand, within IAI46_11000 at 2324.367 kb on - strand, within IAI46_11000 at 2324.369 kb on + strand, within IAI46_11000 at 2324.451 kb on + strand, within IAI46_11000 at 2324.451 kb on + strand, within IAI46_11000 at 2324.548 kb on + strand, within IAI46_11000 at 2324.549 kb on - strand, within IAI46_11000 at 2324.579 kb on + strand, within IAI46_11000 at 2324.579 kb on + strand, within IAI46_11000 at 2324.579 kb on + strand, within IAI46_11000 at 2324.580 kb on - strand, within IAI46_11000 at 2324.584 kb on + strand, within IAI46_11000 at 2324.584 kb on + strand, within IAI46_11000 at 2324.585 kb on - strand, within IAI46_11000 at 2324.585 kb on - strand, within IAI46_11000 at 2324.712 kb on - strand, within IAI46_11000 at 2324.791 kb on - strand, within IAI46_11000 at 2324.791 kb on - strand, within IAI46_11000 at 2324.841 kb on + strand, within IAI46_11000 at 2324.841 kb on + strand, within IAI46_11000
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, anaerobic remove 2,322,873 - +0.6 2,323,134 - +0.3 2,323,244 + +0.1 2,323,569 - IAI46_10995 0.30 +0.3 2,323,571 + IAI46_10995 0.31 -2.2 2,323,571 + IAI46_10995 0.31 +0.6 2,323,869 + -0.7 2,323,870 - +0.9 2,323,870 - +0.5 2,323,973 + +0.3 2,323,993 + +0.6 2,324,035 - +1.8 2,324,060 + -1.0 2,324,100 - -0.1 2,324,322 - IAI46_11000 0.28 +0.1 2,324,366 + IAI46_11000 0.33 -1.0 2,324,367 - IAI46_11000 0.33 +0.7 2,324,369 + IAI46_11000 0.33 +0.4 2,324,451 + IAI46_11000 0.41 +1.0 2,324,451 + IAI46_11000 0.41 -0.3 2,324,548 + IAI46_11000 0.51 -0.1 2,324,549 - IAI46_11000 0.51 +0.6 2,324,579 + IAI46_11000 0.54 -0.4 2,324,579 + IAI46_11000 0.54 -0.0 2,324,579 + IAI46_11000 0.54 -0.1 2,324,580 - IAI46_11000 0.54 -0.5 2,324,584 + IAI46_11000 0.54 -1.0 2,324,584 + IAI46_11000 0.54 -0.4 2,324,585 - IAI46_11000 0.55 -0.3 2,324,585 - IAI46_11000 0.55 -0.5 2,324,712 - IAI46_11000 0.67 +0.1 2,324,791 - IAI46_11000 0.75 +0.5 2,324,791 - IAI46_11000 0.75 +1.0 2,324,841 + IAI46_11000 0.80 -1.7 2,324,841 + IAI46_11000 0.80 -0.7
Or see this region's nucleotide sequence