Experiment: dichromate 20 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_10925 and IAI46_10930 are separated by 38 nucleotides IAI46_10930 and IAI46_10935 are separated by 133 nucleotides IAI46_10935 and IAI46_10940 are separated by 247 nucleotides
IAI46_10925: IAI46_10925 - ABC transporter substrate-binding protein, at 2,309,751 to 2,310,884
_10925
IAI46_10930: IAI46_10930 - MarC family NAAT transporter, at 2,310,923 to 2,311,600
_10930
IAI46_10935: IAI46_10935 - hypothetical protein, at 2,311,734 to 2,311,955
_10935
IAI46_10940: IAI46_10940 - CAP-Gly protein, at 2,312,203 to 2,313,243
_10940
Position (kb)
2311
2312 Strain fitness (log2 ratio)
-2
-1
0
1 at 2310.805 kb on - strand at 2310.918 kb on + strand at 2310.940 kb on - strand at 2310.973 kb on + strand at 2310.974 kb on - strand at 2310.988 kb on + strand at 2310.988 kb on + strand at 2310.989 kb on - strand at 2311.423 kb on - strand, within IAI46_10930 at 2311.453 kb on - strand, within IAI46_10930 at 2311.590 kb on - strand at 2311.600 kb on + strand at 2311.717 kb on - strand at 2311.781 kb on + strand, within IAI46_10935 at 2312.080 kb on - strand at 2312.085 kb on + strand at 2312.144 kb on - strand at 2312.199 kb on + strand at 2312.202 kb on + strand at 2312.202 kb on + strand at 2312.430 kb on + strand, within IAI46_10940 at 2312.525 kb on + strand, within IAI46_10940 at 2312.526 kb on - strand, within IAI46_10940 at 2312.949 kb on + strand, within IAI46_10940
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, anaerobic remove 2,310,805 - +0.4 2,310,918 + -1.3 2,310,940 - -0.3 2,310,973 + -0.2 2,310,974 - -0.5 2,310,988 + +0.7 2,310,988 + +0.3 2,310,989 - -1.4 2,311,423 - IAI46_10930 0.74 -2.0 2,311,453 - IAI46_10930 0.78 +0.4 2,311,590 - -0.0 2,311,600 + +0.7 2,311,717 - +0.1 2,311,781 + IAI46_10935 0.21 +0.8 2,312,080 - +0.2 2,312,085 + -1.0 2,312,144 - +0.1 2,312,199 + -1.4 2,312,202 + +0.3 2,312,202 + +0.2 2,312,430 + IAI46_10940 0.22 +0.4 2,312,525 + IAI46_10940 0.31 +1.6 2,312,526 - IAI46_10940 0.31 +1.0 2,312,949 + IAI46_10940 0.72 -0.2
Or see this region's nucleotide sequence