Experiment: dichromate 20 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_09940 and IAI46_09945 are separated by 392 nucleotides IAI46_09945 and IAI46_09950 are separated by 431 nucleotides IAI46_09950 and IAI46_09955 are separated by 127 nucleotides
IAI46_09940: IAI46_09940 - tRNA-Ser, at 2,102,632 to 2,102,721
_09940
IAI46_09945: IAI46_09945 - tRNA-Ser, at 2,103,114 to 2,103,203
_09945
IAI46_09950: IAI46_09950 - peptide MFS transporter, at 2,103,635 to 2,105,119
_09950
IAI46_09955: IAI46_09955 - glyoxylate/hydroxypyruvate reductase GhrA, at 2,105,247 to 2,106,188
_09955
Position (kb)
2103
2104
2105
2106 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2102.762 kb on - strand at 2102.762 kb on - strand at 2102.762 kb on - strand at 2102.764 kb on + strand at 2102.765 kb on - strand at 2102.765 kb on - strand at 2102.765 kb on - strand at 2102.765 kb on - strand at 2102.767 kb on - strand at 2102.767 kb on - strand at 2103.045 kb on - strand at 2103.064 kb on + strand at 2103.246 kb on - strand at 2103.251 kb on - strand at 2103.288 kb on + strand at 2103.289 kb on - strand at 2103.307 kb on - strand at 2103.433 kb on + strand at 2103.434 kb on - strand at 2103.435 kb on + strand at 2103.436 kb on - strand at 2103.455 kb on - strand at 2103.455 kb on - strand at 2103.474 kb on + strand at 2103.486 kb on - strand at 2103.489 kb on - strand at 2103.489 kb on - strand at 2103.508 kb on + strand at 2103.509 kb on - strand at 2103.606 kb on - strand at 2103.819 kb on + strand, within IAI46_09950 at 2103.819 kb on + strand, within IAI46_09950 at 2103.820 kb on - strand, within IAI46_09950 at 2103.837 kb on - strand, within IAI46_09950 at 2103.848 kb on - strand, within IAI46_09950 at 2104.018 kb on + strand, within IAI46_09950 at 2104.021 kb on + strand, within IAI46_09950 at 2104.021 kb on + strand, within IAI46_09950 at 2104.021 kb on + strand, within IAI46_09950 at 2104.022 kb on - strand, within IAI46_09950 at 2104.042 kb on + strand, within IAI46_09950 at 2104.085 kb on + strand, within IAI46_09950 at 2104.477 kb on - strand, within IAI46_09950 at 2104.503 kb on - strand, within IAI46_09950 at 2104.547 kb on - strand, within IAI46_09950 at 2104.604 kb on - strand, within IAI46_09950 at 2104.943 kb on + strand, within IAI46_09950 at 2104.944 kb on - strand, within IAI46_09950 at 2104.944 kb on - strand, within IAI46_09950 at 2105.176 kb on - strand at 2105.223 kb on + strand at 2105.368 kb on - strand, within IAI46_09955 at 2105.554 kb on - strand, within IAI46_09955 at 2105.554 kb on - strand, within IAI46_09955 at 2105.561 kb on + strand, within IAI46_09955 at 2105.562 kb on - strand, within IAI46_09955 at 2105.565 kb on + strand, within IAI46_09955 at 2105.565 kb on + strand, within IAI46_09955 at 2105.566 kb on - strand, within IAI46_09955 at 2105.566 kb on - strand, within IAI46_09955 at 2105.598 kb on + strand, within IAI46_09955 at 2105.850 kb on - strand, within IAI46_09955 at 2105.867 kb on + strand, within IAI46_09955 at 2105.868 kb on - strand, within IAI46_09955 at 2105.956 kb on + strand, within IAI46_09955 at 2105.994 kb on - strand, within IAI46_09955 at 2106.075 kb on - strand, within IAI46_09955
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, anaerobic remove 2,102,762 - -0.4 2,102,762 - -0.4 2,102,762 - +0.7 2,102,764 + +0.4 2,102,765 - -0.8 2,102,765 - -0.2 2,102,765 - -0.5 2,102,765 - -0.2 2,102,767 - +1.6 2,102,767 - -0.3 2,103,045 - +1.0 2,103,064 + +0.6 2,103,246 - +0.0 2,103,251 - -0.9 2,103,288 + +0.1 2,103,289 - +0.6 2,103,307 - +2.1 2,103,433 + -0.2 2,103,434 - +0.5 2,103,435 + -0.2 2,103,436 - -0.3 2,103,455 - +0.2 2,103,455 - -0.4 2,103,474 + -0.2 2,103,486 - +1.0 2,103,489 - -0.2 2,103,489 - +0.4 2,103,508 + +0.6 2,103,509 - -0.7 2,103,606 - -0.4 2,103,819 + IAI46_09950 0.12 -0.1 2,103,819 + IAI46_09950 0.12 -1.2 2,103,820 - IAI46_09950 0.12 -1.4 2,103,837 - IAI46_09950 0.14 -1.2 2,103,848 - IAI46_09950 0.14 +0.2 2,104,018 + IAI46_09950 0.26 +0.6 2,104,021 + IAI46_09950 0.26 -0.4 2,104,021 + IAI46_09950 0.26 -0.6 2,104,021 + IAI46_09950 0.26 -0.5 2,104,022 - IAI46_09950 0.26 +1.1 2,104,042 + IAI46_09950 0.27 +0.1 2,104,085 + IAI46_09950 0.30 +0.2 2,104,477 - IAI46_09950 0.57 +0.5 2,104,503 - IAI46_09950 0.58 +1.0 2,104,547 - IAI46_09950 0.61 -0.3 2,104,604 - IAI46_09950 0.65 -0.6 2,104,943 + IAI46_09950 0.88 -0.5 2,104,944 - IAI46_09950 0.88 -1.1 2,104,944 - IAI46_09950 0.88 +1.4 2,105,176 - +1.4 2,105,223 + -0.6 2,105,368 - IAI46_09955 0.13 -1.8 2,105,554 - IAI46_09955 0.33 -2.0 2,105,554 - IAI46_09955 0.33 -0.9 2,105,561 + IAI46_09955 0.33 -0.9 2,105,562 - IAI46_09955 0.33 -0.3 2,105,565 + IAI46_09955 0.34 +0.8 2,105,565 + IAI46_09955 0.34 -1.8 2,105,566 - IAI46_09955 0.34 -0.3 2,105,566 - IAI46_09955 0.34 +1.6 2,105,598 + IAI46_09955 0.37 +0.2 2,105,850 - IAI46_09955 0.64 -1.7 2,105,867 + IAI46_09955 0.66 +1.5 2,105,868 - IAI46_09955 0.66 +0.1 2,105,956 + IAI46_09955 0.75 -0.0 2,105,994 - IAI46_09955 0.79 -0.0 2,106,075 - IAI46_09955 0.88 +1.2
Or see this region's nucleotide sequence