Experiment: dichromate 20 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_09825 and IAI46_09830 are separated by 338 nucleotides IAI46_09830 and IAI46_09835 are separated by 199 nucleotides IAI46_09835 and IAI46_09840 are separated by 147 nucleotides
IAI46_09825: IAI46_09825 - metal-dependent hydrolase, at 2,079,818 to 2,080,594
_09825
IAI46_09830: IAI46_09830 - PTS glucose transporter subunit IIBC, at 2,080,933 to 2,082,366
_09830
IAI46_09835: IAI46_09835 - hypothetical protein, at 2,082,566 to 2,083,075
_09835
IAI46_09840: IAI46_09840 - manganese-binding transcriptional regulator MntR, at 2,083,223 to 2,083,693
_09840
Position (kb)
2080
2081
2082
2083 Strain fitness (log2 ratio)
-2
-1
0
1 at 2080.047 kb on - strand, within IAI46_09825 at 2080.113 kb on - strand, within IAI46_09825 at 2080.335 kb on - strand, within IAI46_09825 at 2080.335 kb on - strand, within IAI46_09825 at 2080.485 kb on - strand, within IAI46_09825 at 2080.505 kb on + strand, within IAI46_09825 at 2080.505 kb on + strand, within IAI46_09825 at 2080.575 kb on + strand at 2080.575 kb on + strand at 2080.576 kb on - strand at 2080.609 kb on + strand at 2080.610 kb on - strand at 2080.610 kb on - strand at 2080.617 kb on + strand at 2080.618 kb on - strand at 2080.618 kb on - strand at 2080.618 kb on - strand at 2080.899 kb on - strand at 2080.909 kb on + strand at 2080.909 kb on + strand at 2080.933 kb on - strand at 2080.971 kb on + strand at 2081.298 kb on + strand, within IAI46_09830 at 2081.322 kb on + strand, within IAI46_09830 at 2081.430 kb on - strand, within IAI46_09830 at 2081.460 kb on + strand, within IAI46_09830 at 2081.494 kb on + strand, within IAI46_09830 at 2081.524 kb on + strand, within IAI46_09830 at 2081.580 kb on - strand, within IAI46_09830 at 2081.651 kb on - strand, within IAI46_09830 at 2081.652 kb on + strand, within IAI46_09830 at 2081.677 kb on - strand, within IAI46_09830 at 2081.911 kb on - strand, within IAI46_09830 at 2081.965 kb on - strand, within IAI46_09830 at 2082.022 kb on + strand, within IAI46_09830 at 2082.022 kb on + strand, within IAI46_09830 at 2082.034 kb on + strand, within IAI46_09830 at 2082.038 kb on - strand, within IAI46_09830 at 2082.038 kb on - strand, within IAI46_09830 at 2082.350 kb on - strand at 2082.365 kb on - strand at 2082.465 kb on + strand at 2082.626 kb on + strand, within IAI46_09835 at 2082.627 kb on - strand, within IAI46_09835 at 2082.646 kb on + strand, within IAI46_09835 at 2082.647 kb on - strand, within IAI46_09835 at 2082.647 kb on - strand, within IAI46_09835 at 2082.657 kb on - strand, within IAI46_09835 at 2082.664 kb on + strand, within IAI46_09835 at 2082.692 kb on + strand, within IAI46_09835 at 2082.714 kb on + strand, within IAI46_09835 at 2082.714 kb on + strand, within IAI46_09835 at 2082.714 kb on + strand, within IAI46_09835 at 2082.770 kb on - strand, within IAI46_09835 at 2082.782 kb on + strand, within IAI46_09835 at 2082.840 kb on + strand, within IAI46_09835 at 2082.840 kb on + strand, within IAI46_09835 at 2082.854 kb on + strand, within IAI46_09835 at 2082.855 kb on - strand, within IAI46_09835 at 2082.899 kb on + strand, within IAI46_09835 at 2082.966 kb on + strand, within IAI46_09835 at 2082.966 kb on + strand, within IAI46_09835 at 2082.973 kb on - strand, within IAI46_09835 at 2082.973 kb on - strand, within IAI46_09835 at 2082.973 kb on - strand, within IAI46_09835 at 2082.973 kb on - strand, within IAI46_09835 at 2083.056 kb on - strand at 2083.056 kb on - strand at 2083.056 kb on - strand at 2083.056 kb on - strand at 2083.104 kb on - strand at 2083.118 kb on - strand at 2083.153 kb on + strand at 2083.191 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, anaerobic remove 2,080,047 - IAI46_09825 0.29 -0.8 2,080,113 - IAI46_09825 0.38 -0.3 2,080,335 - IAI46_09825 0.67 -1.1 2,080,335 - IAI46_09825 0.67 +0.0 2,080,485 - IAI46_09825 0.86 +0.2 2,080,505 + IAI46_09825 0.88 -0.0 2,080,505 + IAI46_09825 0.88 -0.5 2,080,575 + +1.2 2,080,575 + +0.6 2,080,576 - -0.2 2,080,609 + -0.0 2,080,610 - -0.1 2,080,610 - +0.0 2,080,617 + +0.8 2,080,618 - -0.8 2,080,618 - +0.4 2,080,618 - +0.2 2,080,899 - -0.6 2,080,909 + -0.6 2,080,909 + -0.5 2,080,933 - -2.3 2,080,971 + +0.1 2,081,298 + IAI46_09830 0.25 -0.7 2,081,322 + IAI46_09830 0.27 -2.0 2,081,430 - IAI46_09830 0.35 -1.7 2,081,460 + IAI46_09830 0.37 -2.0 2,081,494 + IAI46_09830 0.39 -0.2 2,081,524 + IAI46_09830 0.41 -0.6 2,081,580 - IAI46_09830 0.45 -0.1 2,081,651 - IAI46_09830 0.50 -0.8 2,081,652 + IAI46_09830 0.50 -0.5 2,081,677 - IAI46_09830 0.52 -1.8 2,081,911 - IAI46_09830 0.68 +0.1 2,081,965 - IAI46_09830 0.72 +0.2 2,082,022 + IAI46_09830 0.76 -2.5 2,082,022 + IAI46_09830 0.76 +0.2 2,082,034 + IAI46_09830 0.77 +0.1 2,082,038 - IAI46_09830 0.77 -1.1 2,082,038 - IAI46_09830 0.77 -0.5 2,082,350 - -0.7 2,082,365 - -0.7 2,082,465 + +0.8 2,082,626 + IAI46_09835 0.12 -0.5 2,082,627 - IAI46_09835 0.12 +0.7 2,082,646 + IAI46_09835 0.16 +0.1 2,082,647 - IAI46_09835 0.16 -1.5 2,082,647 - IAI46_09835 0.16 +0.6 2,082,657 - IAI46_09835 0.18 +0.1 2,082,664 + IAI46_09835 0.19 +0.2 2,082,692 + IAI46_09835 0.25 -0.5 2,082,714 + IAI46_09835 0.29 +0.9 2,082,714 + IAI46_09835 0.29 -1.4 2,082,714 + IAI46_09835 0.29 +0.7 2,082,770 - IAI46_09835 0.40 +0.8 2,082,782 + IAI46_09835 0.42 -0.9 2,082,840 + IAI46_09835 0.54 -0.4 2,082,840 + IAI46_09835 0.54 -0.4 2,082,854 + IAI46_09835 0.56 -0.9 2,082,855 - IAI46_09835 0.57 -1.2 2,082,899 + IAI46_09835 0.65 -0.0 2,082,966 + IAI46_09835 0.78 +0.5 2,082,966 + IAI46_09835 0.78 +0.9 2,082,973 - IAI46_09835 0.80 +0.6 2,082,973 - IAI46_09835 0.80 +0.1 2,082,973 - IAI46_09835 0.80 +1.0 2,082,973 - IAI46_09835 0.80 -0.6 2,083,056 - -0.0 2,083,056 - -1.2 2,083,056 - +0.9 2,083,056 - -0.2 2,083,104 - +0.1 2,083,118 - +0.4 2,083,153 + -0.3 2,083,191 - -0.0
Or see this region's nucleotide sequence