Experiment: dichromate 20 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_08450 and IAI46_08455 are separated by 145 nucleotides IAI46_08455 and IAI46_08460 are separated by 36 nucleotides
IAI46_08450: IAI46_08450 - DUF2867 domain-containing protein, at 1,796,113 to 1,797,552
_08450
IAI46_08455: IAI46_08455 - DUF1294 domain-containing protein, at 1,797,698 to 1,798,045
_08455
IAI46_08460: IAI46_08460 - low-specificity L-threonine aldolase, at 1,798,082 to 1,799,098
_08460
Position (kb)
1797
1798
1799 Strain fitness (log2 ratio)
-2
-1
0
1 at 1796.909 kb on + strand, within IAI46_08450 at 1796.910 kb on - strand, within IAI46_08450 at 1796.919 kb on - strand, within IAI46_08450 at 1796.919 kb on - strand, within IAI46_08450 at 1796.984 kb on + strand, within IAI46_08450 at 1796.984 kb on + strand, within IAI46_08450 at 1796.985 kb on - strand, within IAI46_08450 at 1796.985 kb on - strand, within IAI46_08450 at 1797.062 kb on + strand, within IAI46_08450 at 1797.062 kb on + strand, within IAI46_08450 at 1797.069 kb on + strand, within IAI46_08450 at 1797.079 kb on - strand, within IAI46_08450 at 1797.338 kb on + strand, within IAI46_08450 at 1797.387 kb on - strand, within IAI46_08450 at 1797.399 kb on - strand, within IAI46_08450 at 1797.510 kb on + strand at 1797.511 kb on - strand at 1797.513 kb on - strand at 1797.554 kb on - strand at 1797.564 kb on + strand at 1797.605 kb on + strand at 1797.605 kb on + strand at 1797.649 kb on - strand at 1797.664 kb on + strand at 1797.719 kb on + strand at 1797.816 kb on - strand, within IAI46_08455 at 1797.874 kb on - strand, within IAI46_08455 at 1798.165 kb on + strand at 1798.166 kb on - strand at 1798.259 kb on + strand, within IAI46_08460 at 1798.259 kb on + strand, within IAI46_08460 at 1798.259 kb on + strand, within IAI46_08460 at 1798.259 kb on + strand, within IAI46_08460 at 1798.260 kb on - strand, within IAI46_08460 at 1798.260 kb on - strand, within IAI46_08460 at 1798.363 kb on + strand, within IAI46_08460 at 1798.363 kb on + strand, within IAI46_08460 at 1798.363 kb on + strand, within IAI46_08460 at 1798.364 kb on - strand, within IAI46_08460 at 1798.650 kb on - strand, within IAI46_08460 at 1798.650 kb on - strand, within IAI46_08460 at 1798.653 kb on + strand, within IAI46_08460 at 1798.808 kb on - strand, within IAI46_08460 at 1798.837 kb on - strand, within IAI46_08460 at 1798.840 kb on + strand, within IAI46_08460 at 1798.842 kb on + strand, within IAI46_08460 at 1798.843 kb on - strand, within IAI46_08460 at 1798.843 kb on - strand, within IAI46_08460 at 1798.846 kb on + strand, within IAI46_08460 at 1798.846 kb on + strand, within IAI46_08460 at 1798.847 kb on - strand, within IAI46_08460 at 1798.869 kb on + strand, within IAI46_08460 at 1798.869 kb on + strand, within IAI46_08460 at 1798.870 kb on - strand, within IAI46_08460 at 1798.870 kb on - strand, within IAI46_08460 at 1798.993 kb on + strand, within IAI46_08460 at 1799.008 kb on - strand at 1799.008 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, anaerobic remove 1,796,909 + IAI46_08450 0.55 -1.1 1,796,910 - IAI46_08450 0.55 -0.4 1,796,919 - IAI46_08450 0.56 +1.2 1,796,919 - IAI46_08450 0.56 -0.9 1,796,984 + IAI46_08450 0.60 +0.6 1,796,984 + IAI46_08450 0.60 -0.4 1,796,985 - IAI46_08450 0.61 +0.3 1,796,985 - IAI46_08450 0.61 +1.0 1,797,062 + IAI46_08450 0.66 +0.8 1,797,062 + IAI46_08450 0.66 -0.3 1,797,069 + IAI46_08450 0.66 +1.1 1,797,079 - IAI46_08450 0.67 +0.4 1,797,338 + IAI46_08450 0.85 +0.5 1,797,387 - IAI46_08450 0.88 +1.4 1,797,399 - IAI46_08450 0.89 -0.2 1,797,510 + -0.4 1,797,511 - +1.5 1,797,513 - -0.0 1,797,554 - +0.0 1,797,564 + -0.5 1,797,605 + -1.7 1,797,605 + -1.3 1,797,649 - +0.4 1,797,664 + +0.1 1,797,719 + -2.0 1,797,816 - IAI46_08455 0.34 -1.5 1,797,874 - IAI46_08455 0.51 -0.2 1,798,165 + -0.6 1,798,166 - +0.4 1,798,259 + IAI46_08460 0.17 +1.0 1,798,259 + IAI46_08460 0.17 -0.4 1,798,259 + IAI46_08460 0.17 +1.6 1,798,259 + IAI46_08460 0.17 +0.9 1,798,260 - IAI46_08460 0.18 -0.3 1,798,260 - IAI46_08460 0.18 +0.3 1,798,363 + IAI46_08460 0.28 +0.5 1,798,363 + IAI46_08460 0.28 +0.6 1,798,363 + IAI46_08460 0.28 +0.6 1,798,364 - IAI46_08460 0.28 +0.2 1,798,650 - IAI46_08460 0.56 +0.4 1,798,650 - IAI46_08460 0.56 -0.4 1,798,653 + IAI46_08460 0.56 +0.6 1,798,808 - IAI46_08460 0.71 +0.4 1,798,837 - IAI46_08460 0.74 +0.3 1,798,840 + IAI46_08460 0.75 +0.2 1,798,842 + IAI46_08460 0.75 -1.5 1,798,843 - IAI46_08460 0.75 +1.0 1,798,843 - IAI46_08460 0.75 -0.6 1,798,846 + IAI46_08460 0.75 +0.4 1,798,846 + IAI46_08460 0.75 +1.1 1,798,847 - IAI46_08460 0.75 -0.4 1,798,869 + IAI46_08460 0.77 -0.1 1,798,869 + IAI46_08460 0.77 +0.0 1,798,870 - IAI46_08460 0.77 +0.7 1,798,870 - IAI46_08460 0.77 +0.6 1,798,993 + IAI46_08460 0.90 -0.4 1,799,008 - -0.6 1,799,008 - +0.6
Or see this region's nucleotide sequence