Experiment: dichromate 20 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_08140 and IAI46_08145 overlap by 4 nucleotides IAI46_08145 and IAI46_08150 are separated by 14 nucleotides IAI46_08150 and IAI46_08155 are separated by 16 nucleotides
IAI46_08140: IAI46_08140 - UDP-galactopyranose mutase, at 1,731,305 to 1,732,459
_08140
IAI46_08145: IAI46_08145 - glycosyltransferase, at 1,732,456 to 1,733,352
_08145
IAI46_08150: IAI46_08150 - glycosyltransferase family 4 protein, at 1,733,367 to 1,734,509
_08150
IAI46_08155: IAI46_08155 - polysaccharide pyruvyl transferase family protein, at 1,734,526 to 1,735,716
_08155
Position (kb)
1733
1734
1735 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1732.400 kb on + strand at 1732.429 kb on + strand at 1732.429 kb on + strand at 1732.473 kb on - strand at 1732.552 kb on - strand, within IAI46_08145 at 1732.599 kb on + strand, within IAI46_08145 at 1732.709 kb on + strand, within IAI46_08145 at 1732.710 kb on - strand, within IAI46_08145 at 1732.713 kb on + strand, within IAI46_08145 at 1732.713 kb on + strand, within IAI46_08145 at 1732.812 kb on + strand, within IAI46_08145 at 1732.812 kb on + strand, within IAI46_08145 at 1732.812 kb on + strand, within IAI46_08145 at 1732.813 kb on - strand, within IAI46_08145 at 1732.886 kb on - strand, within IAI46_08145 at 1732.906 kb on + strand, within IAI46_08145 at 1732.907 kb on - strand, within IAI46_08145 at 1732.941 kb on + strand, within IAI46_08145 at 1732.942 kb on - strand, within IAI46_08145 at 1733.027 kb on - strand, within IAI46_08145 at 1733.047 kb on + strand, within IAI46_08145 at 1733.048 kb on - strand, within IAI46_08145 at 1733.048 kb on - strand, within IAI46_08145 at 1733.080 kb on + strand, within IAI46_08145 at 1733.152 kb on + strand, within IAI46_08145 at 1733.152 kb on + strand, within IAI46_08145 at 1733.153 kb on - strand, within IAI46_08145 at 1733.156 kb on - strand, within IAI46_08145 at 1733.181 kb on + strand, within IAI46_08145 at 1733.292 kb on + strand at 1733.296 kb on + strand at 1733.441 kb on + strand at 1733.454 kb on + strand at 1733.615 kb on + strand, within IAI46_08150 at 1733.629 kb on + strand, within IAI46_08150 at 1733.693 kb on + strand, within IAI46_08150 at 1733.693 kb on + strand, within IAI46_08150 at 1733.694 kb on - strand, within IAI46_08150 at 1733.738 kb on + strand, within IAI46_08150 at 1733.739 kb on - strand, within IAI46_08150 at 1733.791 kb on + strand, within IAI46_08150 at 1733.795 kb on + strand, within IAI46_08150 at 1733.916 kb on - strand, within IAI46_08150 at 1734.058 kb on + strand, within IAI46_08150 at 1734.058 kb on + strand, within IAI46_08150 at 1734.092 kb on + strand, within IAI46_08150 at 1734.092 kb on + strand, within IAI46_08150 at 1734.094 kb on + strand, within IAI46_08150 at 1734.094 kb on + strand, within IAI46_08150 at 1734.165 kb on + strand, within IAI46_08150 at 1734.165 kb on + strand, within IAI46_08150 at 1734.165 kb on + strand, within IAI46_08150 at 1734.185 kb on + strand, within IAI46_08150 at 1734.185 kb on + strand, within IAI46_08150 at 1734.185 kb on + strand, within IAI46_08150 at 1734.203 kb on + strand, within IAI46_08150 at 1734.203 kb on + strand, within IAI46_08150 at 1734.204 kb on - strand, within IAI46_08150 at 1734.211 kb on - strand, within IAI46_08150 at 1734.338 kb on + strand, within IAI46_08150 at 1734.397 kb on + strand at 1734.397 kb on + strand at 1734.522 kb on + strand at 1734.523 kb on - strand at 1734.564 kb on + strand at 1734.588 kb on - strand at 1734.604 kb on + strand at 1734.604 kb on + strand at 1734.605 kb on - strand at 1734.605 kb on - strand at 1734.605 kb on - strand at 1734.608 kb on + strand at 1734.624 kb on + strand at 1734.625 kb on - strand at 1734.651 kb on - strand, within IAI46_08155 at 1734.703 kb on + strand, within IAI46_08155 at 1734.703 kb on + strand, within IAI46_08155 at 1734.704 kb on - strand, within IAI46_08155 at 1734.766 kb on + strand, within IAI46_08155 at 1734.766 kb on + strand, within IAI46_08155 at 1734.766 kb on + strand, within IAI46_08155 at 1734.767 kb on - strand, within IAI46_08155 at 1734.767 kb on - strand, within IAI46_08155 at 1734.873 kb on + strand, within IAI46_08155 at 1734.888 kb on + strand, within IAI46_08155 at 1734.910 kb on + strand, within IAI46_08155 at 1734.911 kb on - strand, within IAI46_08155 at 1734.947 kb on + strand, within IAI46_08155 at 1734.991 kb on + strand, within IAI46_08155 at 1735.096 kb on + strand, within IAI46_08155 at 1735.096 kb on + strand, within IAI46_08155 at 1735.098 kb on + strand, within IAI46_08155 at 1735.103 kb on + strand, within IAI46_08155 at 1735.219 kb on - strand, within IAI46_08155 at 1735.245 kb on + strand, within IAI46_08155 at 1735.250 kb on + strand, within IAI46_08155
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, anaerobic remove 1,732,400 + +2.0 1,732,429 + -0.7 1,732,429 + -0.7 1,732,473 - -0.5 1,732,552 - IAI46_08145 0.11 -0.7 1,732,599 + IAI46_08145 0.16 -0.3 1,732,709 + IAI46_08145 0.28 +1.0 1,732,710 - IAI46_08145 0.28 +0.8 1,732,713 + IAI46_08145 0.29 +0.2 1,732,713 + IAI46_08145 0.29 -0.3 1,732,812 + IAI46_08145 0.40 -0.7 1,732,812 + IAI46_08145 0.40 +0.9 1,732,812 + IAI46_08145 0.40 +0.2 1,732,813 - IAI46_08145 0.40 -2.2 1,732,886 - IAI46_08145 0.48 -0.0 1,732,906 + IAI46_08145 0.50 -0.7 1,732,907 - IAI46_08145 0.50 -0.5 1,732,941 + IAI46_08145 0.54 -0.3 1,732,942 - IAI46_08145 0.54 +0.4 1,733,027 - IAI46_08145 0.64 +0.4 1,733,047 + IAI46_08145 0.66 -0.9 1,733,048 - IAI46_08145 0.66 -1.3 1,733,048 - IAI46_08145 0.66 -0.6 1,733,080 + IAI46_08145 0.70 -1.2 1,733,152 + IAI46_08145 0.78 +0.0 1,733,152 + IAI46_08145 0.78 -0.9 1,733,153 - IAI46_08145 0.78 -1.7 1,733,156 - IAI46_08145 0.78 +0.7 1,733,181 + IAI46_08145 0.81 -0.3 1,733,292 + -0.3 1,733,296 + -2.1 1,733,441 + -1.1 1,733,454 + +0.1 1,733,615 + IAI46_08150 0.22 -0.2 1,733,629 + IAI46_08150 0.23 -0.2 1,733,693 + IAI46_08150 0.29 -0.1 1,733,693 + IAI46_08150 0.29 +0.6 1,733,694 - IAI46_08150 0.29 +0.1 1,733,738 + IAI46_08150 0.32 -1.9 1,733,739 - IAI46_08150 0.33 +0.6 1,733,791 + IAI46_08150 0.37 -0.1 1,733,795 + IAI46_08150 0.37 -1.5 1,733,916 - IAI46_08150 0.48 +0.7 1,734,058 + IAI46_08150 0.60 -0.4 1,734,058 + IAI46_08150 0.60 -1.0 1,734,092 + IAI46_08150 0.63 -0.2 1,734,092 + IAI46_08150 0.63 -0.0 1,734,094 + IAI46_08150 0.64 -1.3 1,734,094 + IAI46_08150 0.64 -0.0 1,734,165 + IAI46_08150 0.70 -0.2 1,734,165 + IAI46_08150 0.70 +0.9 1,734,165 + IAI46_08150 0.70 -0.2 1,734,185 + IAI46_08150 0.72 +0.9 1,734,185 + IAI46_08150 0.72 -0.6 1,734,185 + IAI46_08150 0.72 -0.3 1,734,203 + IAI46_08150 0.73 +0.4 1,734,203 + IAI46_08150 0.73 +0.1 1,734,204 - IAI46_08150 0.73 +1.0 1,734,211 - IAI46_08150 0.74 -0.9 1,734,338 + IAI46_08150 0.85 -0.3 1,734,397 + +1.2 1,734,397 + +0.5 1,734,522 + +0.2 1,734,523 - +0.4 1,734,564 + +0.8 1,734,588 - -0.2 1,734,604 + +0.1 1,734,604 + -0.2 1,734,605 - -0.5 1,734,605 - +0.5 1,734,605 - +0.5 1,734,608 + +0.4 1,734,624 + -0.7 1,734,625 - -0.1 1,734,651 - IAI46_08155 0.10 -0.2 1,734,703 + IAI46_08155 0.15 +0.0 1,734,703 + IAI46_08155 0.15 -2.5 1,734,704 - IAI46_08155 0.15 -1.1 1,734,766 + IAI46_08155 0.20 +0.3 1,734,766 + IAI46_08155 0.20 +0.1 1,734,766 + IAI46_08155 0.20 +0.8 1,734,767 - IAI46_08155 0.20 -0.8 1,734,767 - IAI46_08155 0.20 +0.4 1,734,873 + IAI46_08155 0.29 +0.8 1,734,888 + IAI46_08155 0.30 +0.2 1,734,910 + IAI46_08155 0.32 -0.5 1,734,911 - IAI46_08155 0.32 +0.3 1,734,947 + IAI46_08155 0.35 -0.3 1,734,991 + IAI46_08155 0.39 -0.7 1,735,096 + IAI46_08155 0.48 +0.5 1,735,096 + IAI46_08155 0.48 -0.3 1,735,098 + IAI46_08155 0.48 +0.3 1,735,103 + IAI46_08155 0.48 -2.5 1,735,219 - IAI46_08155 0.58 -0.8 1,735,245 + IAI46_08155 0.60 +0.8 1,735,250 + IAI46_08155 0.61 -0.5
Or see this region's nucleotide sequence