Experiment: dichromate 20 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_04950 and IAI46_04955 are separated by 167 nucleotides IAI46_04955 and IAI46_04960 are separated by 201 nucleotides
IAI46_04950: IAI46_04950 - 2-dehydropantoate 2-reductase, at 1,065,986 to 1,066,897
_04950
IAI46_04955: IAI46_04955 - YajQ family cyclic di-GMP-binding protein, at 1,067,065 to 1,067,556
_04955
IAI46_04960: IAI46_04960 - MFS transporter, at 1,067,758 to 1,069,122
_04960
Position (kb)
1067
1068 Strain fitness (log2 ratio)
-2
-1
0
1 at 1066.110 kb on + strand, within IAI46_04950 at 1066.123 kb on - strand, within IAI46_04950 at 1066.123 kb on - strand, within IAI46_04950 at 1066.209 kb on + strand, within IAI46_04950 at 1066.209 kb on + strand, within IAI46_04950 at 1066.210 kb on - strand, within IAI46_04950 at 1066.210 kb on - strand, within IAI46_04950 at 1066.234 kb on + strand, within IAI46_04950 at 1066.234 kb on + strand, within IAI46_04950 at 1066.234 kb on + strand, within IAI46_04950 at 1066.235 kb on - strand, within IAI46_04950 at 1066.235 kb on - strand, within IAI46_04950 at 1066.235 kb on - strand, within IAI46_04950 at 1066.239 kb on + strand, within IAI46_04950 at 1066.240 kb on - strand, within IAI46_04950 at 1066.327 kb on + strand, within IAI46_04950 at 1066.327 kb on + strand, within IAI46_04950 at 1066.329 kb on + strand, within IAI46_04950 at 1066.329 kb on + strand, within IAI46_04950 at 1066.330 kb on - strand, within IAI46_04950 at 1066.330 kb on - strand, within IAI46_04950 at 1066.330 kb on - strand, within IAI46_04950 at 1066.348 kb on + strand, within IAI46_04950 at 1066.349 kb on - strand, within IAI46_04950 at 1066.510 kb on + strand, within IAI46_04950 at 1066.513 kb on + strand, within IAI46_04950 at 1066.513 kb on + strand, within IAI46_04950 at 1066.513 kb on + strand, within IAI46_04950 at 1066.513 kb on + strand, within IAI46_04950 at 1066.514 kb on - strand, within IAI46_04950 at 1066.514 kb on - strand, within IAI46_04950 at 1066.685 kb on + strand, within IAI46_04950 at 1066.809 kb on - strand at 1066.820 kb on + strand at 1066.820 kb on + strand at 1066.821 kb on - strand at 1066.840 kb on - strand at 1066.890 kb on - strand at 1066.890 kb on - strand at 1066.890 kb on - strand at 1066.933 kb on - strand at 1066.936 kb on + strand at 1066.941 kb on + strand at 1066.947 kb on + strand at 1066.997 kb on + strand at 1067.039 kb on + strand at 1067.039 kb on + strand at 1067.064 kb on + strand at 1067.064 kb on + strand at 1067.064 kb on + strand at 1067.097 kb on + strand at 1067.097 kb on + strand at 1067.112 kb on + strand at 1067.113 kb on - strand at 1067.253 kb on + strand, within IAI46_04955 at 1067.367 kb on + strand, within IAI46_04955 at 1067.466 kb on + strand, within IAI46_04955 at 1067.575 kb on + strand at 1067.576 kb on - strand at 1067.576 kb on - strand at 1067.577 kb on + strand at 1067.578 kb on - strand at 1067.704 kb on + strand at 1067.760 kb on - strand at 1067.819 kb on - strand at 1067.823 kb on - strand at 1067.860 kb on + strand at 1067.861 kb on - strand at 1067.925 kb on + strand, within IAI46_04960 at 1067.925 kb on + strand, within IAI46_04960 at 1067.925 kb on + strand, within IAI46_04960 at 1067.926 kb on - strand, within IAI46_04960 at 1067.926 kb on - strand, within IAI46_04960 at 1067.926 kb on - strand, within IAI46_04960 at 1067.946 kb on - strand, within IAI46_04960 at 1067.964 kb on + strand, within IAI46_04960 at 1067.964 kb on + strand, within IAI46_04960 at 1067.965 kb on - strand, within IAI46_04960 at 1067.976 kb on + strand, within IAI46_04960 at 1068.095 kb on + strand, within IAI46_04960 at 1068.095 kb on + strand, within IAI46_04960 at 1068.118 kb on - strand, within IAI46_04960 at 1068.119 kb on + strand, within IAI46_04960 at 1068.120 kb on - strand, within IAI46_04960 at 1068.138 kb on + strand, within IAI46_04960 at 1068.208 kb on - strand, within IAI46_04960 at 1068.262 kb on + strand, within IAI46_04960 at 1068.279 kb on + strand, within IAI46_04960 at 1068.280 kb on - strand, within IAI46_04960 at 1068.314 kb on + strand, within IAI46_04960 at 1068.314 kb on + strand, within IAI46_04960 at 1068.314 kb on + strand, within IAI46_04960 at 1068.315 kb on - strand, within IAI46_04960 at 1068.321 kb on + strand, within IAI46_04960 at 1068.365 kb on + strand, within IAI46_04960 at 1068.365 kb on + strand, within IAI46_04960 at 1068.365 kb on + strand, within IAI46_04960 at 1068.366 kb on - strand, within IAI46_04960 at 1068.447 kb on + strand, within IAI46_04960 at 1068.447 kb on + strand, within IAI46_04960 at 1068.448 kb on - strand, within IAI46_04960 at 1068.448 kb on - strand, within IAI46_04960 at 1068.448 kb on - strand, within IAI46_04960 at 1068.523 kb on + strand, within IAI46_04960 at 1068.523 kb on + strand, within IAI46_04960 at 1068.523 kb on + strand, within IAI46_04960 at 1068.523 kb on + strand, within IAI46_04960
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, anaerobic remove 1,066,110 + IAI46_04950 0.14 +0.0 1,066,123 - IAI46_04950 0.15 -0.3 1,066,123 - IAI46_04950 0.15 -0.0 1,066,209 + IAI46_04950 0.24 -0.5 1,066,209 + IAI46_04950 0.24 +0.6 1,066,210 - IAI46_04950 0.25 +0.4 1,066,210 - IAI46_04950 0.25 +0.3 1,066,234 + IAI46_04950 0.27 +0.2 1,066,234 + IAI46_04950 0.27 +0.1 1,066,234 + IAI46_04950 0.27 -1.4 1,066,235 - IAI46_04950 0.27 +0.6 1,066,235 - IAI46_04950 0.27 +1.3 1,066,235 - IAI46_04950 0.27 -0.2 1,066,239 + IAI46_04950 0.28 +0.6 1,066,240 - IAI46_04950 0.28 +0.6 1,066,327 + IAI46_04950 0.37 -1.0 1,066,327 + IAI46_04950 0.37 +0.4 1,066,329 + IAI46_04950 0.38 -0.9 1,066,329 + IAI46_04950 0.38 +0.4 1,066,330 - IAI46_04950 0.38 -0.7 1,066,330 - IAI46_04950 0.38 -0.2 1,066,330 - IAI46_04950 0.38 +0.9 1,066,348 + IAI46_04950 0.40 +0.9 1,066,349 - IAI46_04950 0.40 -0.8 1,066,510 + IAI46_04950 0.57 +0.4 1,066,513 + IAI46_04950 0.58 +0.6 1,066,513 + IAI46_04950 0.58 +0.3 1,066,513 + IAI46_04950 0.58 +0.6 1,066,513 + IAI46_04950 0.58 +0.3 1,066,514 - IAI46_04950 0.58 -0.8 1,066,514 - IAI46_04950 0.58 -0.2 1,066,685 + IAI46_04950 0.77 +0.9 1,066,809 - +0.5 1,066,820 + +0.5 1,066,820 + -0.3 1,066,821 - +0.5 1,066,840 - -0.2 1,066,890 - -0.1 1,066,890 - -0.2 1,066,890 - +0.2 1,066,933 - +0.3 1,066,936 + -0.7 1,066,941 + +0.2 1,066,947 + +0.2 1,066,997 + +0.2 1,067,039 + +0.7 1,067,039 + +0.1 1,067,064 + -0.4 1,067,064 + -1.6 1,067,064 + +0.3 1,067,097 + -0.5 1,067,097 + +0.5 1,067,112 + -0.2 1,067,113 - +0.1 1,067,253 + IAI46_04955 0.38 -0.8 1,067,367 + IAI46_04955 0.61 +0.0 1,067,466 + IAI46_04955 0.82 -0.9 1,067,575 + +0.4 1,067,576 - +1.0 1,067,576 - +0.1 1,067,577 + -0.4 1,067,578 - +0.6 1,067,704 + +0.6 1,067,760 - -0.0 1,067,819 - -0.5 1,067,823 - +0.2 1,067,860 + +0.6 1,067,861 - -2.2 1,067,925 + IAI46_04960 0.12 +1.1 1,067,925 + IAI46_04960 0.12 +0.2 1,067,925 + IAI46_04960 0.12 +0.3 1,067,926 - IAI46_04960 0.12 +0.0 1,067,926 - IAI46_04960 0.12 -0.4 1,067,926 - IAI46_04960 0.12 -0.1 1,067,946 - IAI46_04960 0.14 +0.3 1,067,964 + IAI46_04960 0.15 +0.2 1,067,964 + IAI46_04960 0.15 +1.0 1,067,965 - IAI46_04960 0.15 +1.3 1,067,976 + IAI46_04960 0.16 +0.2 1,068,095 + IAI46_04960 0.25 +1.1 1,068,095 + IAI46_04960 0.25 +0.9 1,068,118 - IAI46_04960 0.26 -0.0 1,068,119 + IAI46_04960 0.26 +0.1 1,068,120 - IAI46_04960 0.27 +0.7 1,068,138 + IAI46_04960 0.28 +1.2 1,068,208 - IAI46_04960 0.33 +0.4 1,068,262 + IAI46_04960 0.37 +0.8 1,068,279 + IAI46_04960 0.38 +0.3 1,068,280 - IAI46_04960 0.38 -0.2 1,068,314 + IAI46_04960 0.41 +0.2 1,068,314 + IAI46_04960 0.41 -0.0 1,068,314 + IAI46_04960 0.41 +1.1 1,068,315 - IAI46_04960 0.41 +0.9 1,068,321 + IAI46_04960 0.41 -0.3 1,068,365 + IAI46_04960 0.44 +1.1 1,068,365 + IAI46_04960 0.44 +0.2 1,068,365 + IAI46_04960 0.44 +0.2 1,068,366 - IAI46_04960 0.45 +0.6 1,068,447 + IAI46_04960 0.50 -0.4 1,068,447 + IAI46_04960 0.50 -0.6 1,068,448 - IAI46_04960 0.51 +0.6 1,068,448 - IAI46_04960 0.51 +1.3 1,068,448 - IAI46_04960 0.51 -0.2 1,068,523 + IAI46_04960 0.56 -1.0 1,068,523 + IAI46_04960 0.56 +0.3 1,068,523 + IAI46_04960 0.56 +0.5 1,068,523 + IAI46_04960 0.56 +0.6
Or see this region's nucleotide sequence