Experiment: dichromate 20 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_02445 and IAI46_02450 are separated by 751 nucleotides IAI46_02450 and IAI46_02455 are separated by 76 nucleotides IAI46_02455 and IAI46_02460 overlap by 4 nucleotides
IAI46_02445: IAI46_02445 - hypothetical protein, at 524,543 to 525,268
_02445
IAI46_02450: IAI46_02450 - AraC family transcriptional regulator, at 526,020 to 526,826
_02450
IAI46_02455: IAI46_02455 - hypothetical protein, at 526,903 to 527,574
_02455
IAI46_02460: IAI46_02460 - LysE family translocator, at 527,571 to 528,182
_02460
Position (kb) 526
527 Strain fitness (log2 ratio) -2
-1
0
1
2 at 525.027 kb on - strand, within IAI46_02445 at 525.110 kb on - strand, within IAI46_02445 at 525.118 kb on + strand, within IAI46_02445 at 525.162 kb on + strand, within IAI46_02445 at 525.208 kb on + strand at 525.219 kb on + strand at 525.288 kb on - strand at 525.316 kb on - strand at 525.356 kb on - strand at 525.357 kb on + strand at 525.358 kb on - strand at 525.392 kb on + strand at 525.397 kb on - strand at 525.397 kb on - strand at 525.404 kb on + strand at 525.405 kb on - strand at 525.428 kb on + strand at 525.435 kb on + strand at 525.436 kb on - strand at 525.439 kb on + strand at 525.444 kb on + strand at 525.444 kb on + strand at 525.589 kb on + strand at 525.589 kb on + strand at 525.599 kb on + strand at 525.599 kb on + strand at 525.611 kb on + strand at 525.611 kb on + strand at 525.623 kb on + strand at 525.623 kb on + strand at 525.641 kb on + strand at 525.647 kb on + strand at 525.729 kb on + strand at 525.730 kb on - strand at 525.730 kb on - strand at 525.730 kb on - strand at 525.731 kb on + strand at 525.731 kb on + strand at 525.733 kb on + strand at 525.733 kb on + strand at 525.733 kb on + strand at 525.733 kb on + strand at 525.733 kb on + strand at 525.733 kb on + strand at 525.734 kb on - strand at 525.734 kb on - strand at 525.734 kb on - strand at 525.734 kb on - strand at 525.734 kb on - strand at 525.734 kb on - strand at 525.734 kb on - strand at 525.734 kb on - strand at 525.734 kb on - strand at 525.734 kb on - strand at 525.756 kb on + strand at 525.756 kb on + strand at 525.756 kb on + strand at 525.756 kb on + strand at 525.761 kb on + strand at 525.762 kb on - strand at 525.762 kb on - strand at 525.767 kb on + strand at 525.768 kb on - strand at 525.768 kb on - strand at 525.823 kb on + strand at 525.851 kb on + strand at 525.852 kb on - strand at 525.896 kb on + strand at 525.896 kb on + strand at 525.897 kb on - strand at 525.898 kb on + strand at 525.900 kb on + strand at 525.900 kb on + strand at 525.901 kb on - strand at 525.925 kb on + strand at 525.954 kb on + strand at 525.954 kb on + strand at 525.955 kb on - strand at 525.955 kb on - strand at 525.955 kb on - strand at 525.996 kb on + strand at 525.996 kb on + strand at 525.996 kb on + strand at 525.996 kb on + strand at 526.000 kb on + strand at 526.000 kb on + strand at 526.000 kb on + strand at 526.000 kb on + strand at 526.001 kb on - strand at 526.007 kb on - strand at 526.015 kb on - strand at 526.040 kb on + strand at 526.066 kb on + strand at 526.066 kb on + strand at 526.067 kb on - strand at 526.067 kb on - strand at 526.067 kb on - strand at 526.067 kb on - strand at 526.109 kb on + strand, within IAI46_02450 at 526.109 kb on + strand, within IAI46_02450 at 526.109 kb on + strand, within IAI46_02450 at 526.110 kb on - strand, within IAI46_02450 at 526.110 kb on - strand, within IAI46_02450 at 526.135 kb on + strand, within IAI46_02450 at 526.136 kb on - strand, within IAI46_02450 at 526.136 kb on - strand, within IAI46_02450 at 526.200 kb on - strand, within IAI46_02450 at 526.200 kb on - strand, within IAI46_02450 at 526.200 kb on - strand, within IAI46_02450 at 526.205 kb on + strand, within IAI46_02450 at 526.205 kb on + strand, within IAI46_02450 at 526.211 kb on + strand, within IAI46_02450 at 526.243 kb on + strand, within IAI46_02450 at 526.247 kb on + strand, within IAI46_02450 at 526.381 kb on + strand, within IAI46_02450 at 526.384 kb on - strand, within IAI46_02450 at 526.403 kb on + strand, within IAI46_02450 at 526.541 kb on + strand, within IAI46_02450 at 526.541 kb on + strand, within IAI46_02450 at 526.541 kb on + strand, within IAI46_02450 at 526.542 kb on - strand, within IAI46_02450 at 526.561 kb on + strand, within IAI46_02450 at 526.561 kb on + strand, within IAI46_02450 at 526.562 kb on - strand, within IAI46_02450 at 526.562 kb on - strand, within IAI46_02450 at 526.575 kb on + strand, within IAI46_02450 at 526.575 kb on + strand, within IAI46_02450 at 526.576 kb on - strand, within IAI46_02450 at 526.615 kb on + strand, within IAI46_02450 at 526.615 kb on + strand, within IAI46_02450 at 526.638 kb on - strand, within IAI46_02450 at 526.645 kb on + strand, within IAI46_02450 at 526.646 kb on - strand, within IAI46_02450 at 526.659 kb on + strand, within IAI46_02450 at 526.659 kb on + strand, within IAI46_02450 at 526.660 kb on - strand, within IAI46_02450 at 526.660 kb on - strand, within IAI46_02450 at 526.660 kb on - strand, within IAI46_02450 at 526.660 kb on - strand, within IAI46_02450 at 526.665 kb on - strand, within IAI46_02450 at 526.665 kb on - strand, within IAI46_02450 at 526.678 kb on + strand, within IAI46_02450 at 526.687 kb on + strand, within IAI46_02450 at 526.696 kb on + strand, within IAI46_02450 at 526.696 kb on + strand, within IAI46_02450 at 526.696 kb on + strand, within IAI46_02450 at 526.697 kb on - strand, within IAI46_02450 at 526.709 kb on + strand, within IAI46_02450 at 526.709 kb on + strand, within IAI46_02450 at 526.709 kb on + strand, within IAI46_02450 at 526.710 kb on - strand, within IAI46_02450 at 526.710 kb on - strand, within IAI46_02450 at 526.710 kb on - strand, within IAI46_02450 at 526.710 kb on - strand, within IAI46_02450 at 526.710 kb on - strand, within IAI46_02450 at 526.710 kb on - strand, within IAI46_02450 at 526.710 kb on - strand, within IAI46_02450 at 526.760 kb on + strand at 526.781 kb on + strand at 526.781 kb on + strand at 526.781 kb on + strand at 526.781 kb on + strand at 526.782 kb on - strand at 526.782 kb on - strand at 526.785 kb on + strand at 526.785 kb on + strand at 526.794 kb on - strand at 526.806 kb on + strand at 526.806 kb on + strand at 526.807 kb on - strand at 526.812 kb on - strand at 526.812 kb on - strand at 526.819 kb on + strand at 526.850 kb on + strand at 526.910 kb on + strand at 526.911 kb on - strand at 526.911 kb on - strand at 526.915 kb on + strand at 526.915 kb on + strand at 526.961 kb on + strand at 526.961 kb on + strand at 526.961 kb on + strand at 526.961 kb on + strand at 526.962 kb on - strand at 526.962 kb on - strand at 526.962 kb on - strand at 526.965 kb on + strand at 526.965 kb on + strand at 526.965 kb on + strand at 526.965 kb on + strand at 526.965 kb on + strand at 526.977 kb on + strand, within IAI46_02455 at 526.978 kb on - strand, within IAI46_02455 at 527.025 kb on + strand, within IAI46_02455 at 527.096 kb on - strand, within IAI46_02455 at 527.163 kb on + strand, within IAI46_02455 at 527.163 kb on + strand, within IAI46_02455 at 527.163 kb on + strand, within IAI46_02455 at 527.196 kb on + strand, within IAI46_02455 at 527.196 kb on + strand, within IAI46_02455 at 527.208 kb on + strand, within IAI46_02455 at 527.209 kb on - strand, within IAI46_02455 at 527.232 kb on + strand, within IAI46_02455 at 527.232 kb on + strand, within IAI46_02455 at 527.232 kb on + strand, within IAI46_02455 at 527.233 kb on - strand, within IAI46_02455 at 527.234 kb on + strand, within IAI46_02455 at 527.235 kb on - strand, within IAI46_02455 at 527.305 kb on + strand, within IAI46_02455 at 527.305 kb on + strand, within IAI46_02455 at 527.305 kb on + strand, within IAI46_02455 at 527.306 kb on - strand, within IAI46_02455 at 527.306 kb on - strand, within IAI46_02455 at 527.308 kb on + strand, within IAI46_02455 at 527.309 kb on - strand, within IAI46_02455 at 527.309 kb on - strand, within IAI46_02455 at 527.309 kb on - strand, within IAI46_02455 at 527.309 kb on - strand, within IAI46_02455 at 527.367 kb on + strand, within IAI46_02455 at 527.367 kb on + strand, within IAI46_02455 at 527.367 kb on + strand, within IAI46_02455 at 527.367 kb on + strand, within IAI46_02455 at 527.368 kb on - strand, within IAI46_02455 at 527.490 kb on + strand, within IAI46_02455 at 527.490 kb on + strand, within IAI46_02455 at 527.491 kb on - strand, within IAI46_02455 at 527.493 kb on - strand, within IAI46_02455 at 527.493 kb on - strand, within IAI46_02455 at 527.493 kb on - strand, within IAI46_02455 at 527.493 kb on - strand, within IAI46_02455 at 527.493 kb on - strand, within IAI46_02455 at 527.508 kb on + strand at 527.509 kb on - strand at 527.509 kb on - strand at 527.509 kb on - strand at 527.517 kb on + strand at 527.518 kb on - strand at 527.525 kb on + strand at 527.587 kb on + strand at 527.587 kb on + strand at 527.588 kb on - strand at 527.591 kb on + strand at 527.592 kb on - strand at 527.592 kb on - strand at 527.604 kb on - strand at 527.621 kb on + strand at 527.621 kb on + strand at 527.634 kb on + strand, within IAI46_02460 at 527.635 kb on - strand, within IAI46_02460 at 527.635 kb on - strand, within IAI46_02460 at 527.636 kb on + strand, within IAI46_02460 at 527.636 kb on + strand, within IAI46_02460 at 527.636 kb on + strand, within IAI46_02460 at 527.636 kb on + strand, within IAI46_02460 at 527.637 kb on - strand, within IAI46_02460 at 527.671 kb on + strand, within IAI46_02460 at 527.675 kb on + strand, within IAI46_02460 at 527.747 kb on - strand, within IAI46_02460 at 527.747 kb on - strand, within IAI46_02460 at 527.753 kb on - strand, within IAI46_02460 at 527.756 kb on + strand, within IAI46_02460 at 527.756 kb on + strand, within IAI46_02460 at 527.756 kb on + strand, within IAI46_02460
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, anaerobic remove 525,027 - IAI46_02445 0.67 +0.7 525,110 - IAI46_02445 0.78 +0.5 525,118 + IAI46_02445 0.79 +0.2 525,162 + IAI46_02445 0.85 +1.8 525,208 + -0.4 525,219 + +0.7 525,288 - +0.1 525,316 - -0.1 525,356 - -0.0 525,357 + +1.1 525,358 - +0.3 525,392 + +0.6 525,397 - -0.3 525,397 - +0.5 525,404 + +0.2 525,405 - -0.0 525,428 + +1.6 525,435 + -0.2 525,436 - +1.3 525,439 + +0.8 525,444 + +0.4 525,444 + +0.3 525,589 + +0.3 525,589 + +0.4 525,599 + +0.4 525,599 + +0.9 525,611 + -0.9 525,611 + +0.4 525,623 + +1.0 525,623 + -0.7 525,641 + -0.5 525,647 + -0.2 525,729 + -0.8 525,730 - +0.4 525,730 - +0.8 525,730 - +0.7 525,731 + -0.2 525,731 + +0.6 525,733 + +0.1 525,733 + -0.1 525,733 + +0.2 525,733 + +0.3 525,733 + +1.2 525,733 + +1.3 525,734 - +0.6 525,734 - +0.1 525,734 - +0.1 525,734 - +0.7 525,734 - +0.5 525,734 - -0.3 525,734 - +1.0 525,734 - +0.1 525,734 - +1.0 525,734 - +1.5 525,756 + +0.9 525,756 + -0.2 525,756 + -1.8 525,756 + -0.8 525,761 + +0.1 525,762 - -0.0 525,762 - +0.1 525,767 + -0.1 525,768 - +0.4 525,768 - -0.2 525,823 + +0.3 525,851 + -0.5 525,852 - -0.6 525,896 + -0.2 525,896 + -0.3 525,897 - +0.8 525,898 + +0.0 525,900 + -1.1 525,900 + +0.3 525,901 - +0.9 525,925 + -1.4 525,954 + -0.1 525,954 + -0.3 525,955 - +1.6 525,955 - +1.0 525,955 - +0.5 525,996 + +0.4 525,996 + +0.7 525,996 + -0.7 525,996 + -0.9 526,000 + -0.3 526,000 + +0.3 526,000 + +0.1 526,000 + -0.2 526,001 - -0.7 526,007 - +1.0 526,015 - +1.0 526,040 + +0.2 526,066 + -0.0 526,066 + +0.1 526,067 - -0.1 526,067 - -1.0 526,067 - +1.0 526,067 - -0.5 526,109 + IAI46_02450 0.11 +0.5 526,109 + IAI46_02450 0.11 +0.8 526,109 + IAI46_02450 0.11 -0.2 526,110 - IAI46_02450 0.11 +1.2 526,110 - IAI46_02450 0.11 +0.6 526,135 + IAI46_02450 0.14 -0.0 526,136 - IAI46_02450 0.14 +0.6 526,136 - IAI46_02450 0.14 +0.8 526,200 - IAI46_02450 0.22 +0.3 526,200 - IAI46_02450 0.22 +0.8 526,200 - IAI46_02450 0.22 +0.1 526,205 + IAI46_02450 0.23 +0.3 526,205 + IAI46_02450 0.23 -0.4 526,211 + IAI46_02450 0.24 +0.4 526,243 + IAI46_02450 0.28 -0.2 526,247 + IAI46_02450 0.28 +1.0 526,381 + IAI46_02450 0.45 +0.7 526,384 - IAI46_02450 0.45 -1.5 526,403 + IAI46_02450 0.47 -0.1 526,541 + IAI46_02450 0.65 -0.3 526,541 + IAI46_02450 0.65 -0.2 526,541 + IAI46_02450 0.65 +0.7 526,542 - IAI46_02450 0.65 +0.6 526,561 + IAI46_02450 0.67 +0.4 526,561 + IAI46_02450 0.67 -0.2 526,562 - IAI46_02450 0.67 -0.2 526,562 - IAI46_02450 0.67 -0.0 526,575 + IAI46_02450 0.69 -0.1 526,575 + IAI46_02450 0.69 +0.3 526,576 - IAI46_02450 0.69 +1.8 526,615 + IAI46_02450 0.74 +1.0 526,615 + IAI46_02450 0.74 +0.3 526,638 - IAI46_02450 0.77 -1.0 526,645 + IAI46_02450 0.77 -0.7 526,646 - IAI46_02450 0.78 +1.0 526,659 + IAI46_02450 0.79 +0.2 526,659 + IAI46_02450 0.79 -0.2 526,660 - IAI46_02450 0.79 +0.3 526,660 - IAI46_02450 0.79 -0.6 526,660 - IAI46_02450 0.79 +1.5 526,660 - IAI46_02450 0.79 +0.1 526,665 - IAI46_02450 0.80 +0.2 526,665 - IAI46_02450 0.80 +1.3 526,678 + IAI46_02450 0.82 +0.3 526,687 + IAI46_02450 0.83 +0.0 526,696 + IAI46_02450 0.84 +0.4 526,696 + IAI46_02450 0.84 -1.0 526,696 + IAI46_02450 0.84 -0.5 526,697 - IAI46_02450 0.84 +0.1 526,709 + IAI46_02450 0.85 +0.9 526,709 + IAI46_02450 0.85 -0.1 526,709 + IAI46_02450 0.85 -0.3 526,710 - IAI46_02450 0.86 +0.8 526,710 - IAI46_02450 0.86 +0.4 526,710 - IAI46_02450 0.86 -0.2 526,710 - IAI46_02450 0.86 +0.4 526,710 - IAI46_02450 0.86 -0.5 526,710 - IAI46_02450 0.86 +0.6 526,710 - IAI46_02450 0.86 +0.6 526,760 + +0.6 526,781 + +0.5 526,781 + -0.5 526,781 + +1.0 526,781 + +0.2 526,782 - -1.5 526,782 - -0.1 526,785 + +1.5 526,785 + -0.9 526,794 - +1.1 526,806 + -0.1 526,806 + -0.2 526,807 - -0.4 526,812 - +0.3 526,812 - +0.4 526,819 + -0.1 526,850 + +0.1 526,910 + -0.6 526,911 - +0.8 526,911 - +0.0 526,915 + +0.2 526,915 + -0.1 526,961 + +0.2 526,961 + -0.3 526,961 + +0.7 526,961 + -0.2 526,962 - -1.9 526,962 - +1.0 526,962 - +0.3 526,965 + +0.1 526,965 + +0.9 526,965 + -0.1 526,965 + +0.2 526,965 + +0.3 526,977 + IAI46_02455 0.11 +0.2 526,978 - IAI46_02455 0.11 +0.3 527,025 + IAI46_02455 0.18 +1.5 527,096 - IAI46_02455 0.29 -0.8 527,163 + IAI46_02455 0.39 -0.1 527,163 + IAI46_02455 0.39 +1.0 527,163 + IAI46_02455 0.39 +0.7 527,196 + IAI46_02455 0.44 -0.4 527,196 + IAI46_02455 0.44 -0.4 527,208 + IAI46_02455 0.45 -0.1 527,209 - IAI46_02455 0.46 +0.3 527,232 + IAI46_02455 0.49 -0.5 527,232 + IAI46_02455 0.49 +0.3 527,232 + IAI46_02455 0.49 -0.1 527,233 - IAI46_02455 0.49 -0.5 527,234 + IAI46_02455 0.49 +1.1 527,235 - IAI46_02455 0.49 +1.5 527,305 + IAI46_02455 0.60 +0.6 527,305 + IAI46_02455 0.60 -0.3 527,305 + IAI46_02455 0.60 +1.0 527,306 - IAI46_02455 0.60 -1.1 527,306 - IAI46_02455 0.60 -0.2 527,308 + IAI46_02455 0.60 +0.2 527,309 - IAI46_02455 0.60 +1.2 527,309 - IAI46_02455 0.60 +0.8 527,309 - IAI46_02455 0.60 +0.5 527,309 - IAI46_02455 0.60 -0.1 527,367 + IAI46_02455 0.69 +1.0 527,367 + IAI46_02455 0.69 +0.2 527,367 + IAI46_02455 0.69 +0.3 527,367 + IAI46_02455 0.69 +0.1 527,368 - IAI46_02455 0.69 +0.1 527,490 + IAI46_02455 0.87 +0.2 527,490 + IAI46_02455 0.87 +0.8 527,491 - IAI46_02455 0.88 +1.2 527,493 - IAI46_02455 0.88 +0.7 527,493 - IAI46_02455 0.88 +0.2 527,493 - IAI46_02455 0.88 +1.6 527,493 - IAI46_02455 0.88 +0.6 527,493 - IAI46_02455 0.88 +0.5 527,508 + -0.6 527,509 - -0.4 527,509 - +1.2 527,509 - -0.5 527,517 + +0.3 527,518 - -0.7 527,525 + +0.4 527,587 + +0.4 527,587 + +0.5 527,588 - -0.5 527,591 + +0.3 527,592 - +1.1 527,592 - -0.2 527,604 - +0.3 527,621 + -0.1 527,621 + +0.2 527,634 + IAI46_02460 0.10 +0.2 527,635 - IAI46_02460 0.10 -0.5 527,635 - IAI46_02460 0.10 -0.2 527,636 + IAI46_02460 0.11 -1.9 527,636 + IAI46_02460 0.11 +0.9 527,636 + IAI46_02460 0.11 +0.3 527,636 + IAI46_02460 0.11 +0.8 527,637 - IAI46_02460 0.11 +0.1 527,671 + IAI46_02460 0.16 +0.1 527,675 + IAI46_02460 0.17 +1.3 527,747 - IAI46_02460 0.29 +0.7 527,747 - IAI46_02460 0.29 -0.2 527,753 - IAI46_02460 0.30 -0.7 527,756 + IAI46_02460 0.30 -0.4 527,756 + IAI46_02460 0.30 +0.3 527,756 + IAI46_02460 0.30 +0.1
Or see this region's nucleotide sequence