Experiment: dichromate 20 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_02415 and IAI46_02420 are separated by 117 nucleotides IAI46_02420 and IAI46_02425 overlap by 20 nucleotides
IAI46_02415: IAI46_02415 - hypothetical protein, at 516,093 to 516,701
_02415
IAI46_02420: IAI46_02420 - DNA cytosine methyltransferase, at 516,819 to 517,979
_02420
IAI46_02425: IAI46_02425 - ATP-binding protein, at 517,960 to 520,944
_02425
Position (kb) 516
517
518 Strain fitness (log2 ratio) -1
0
1
2 at 516.239 kb on - strand, within IAI46_02415 at 516.553 kb on + strand, within IAI46_02415 at 516.652 kb on + strand at 516.652 kb on + strand at 516.652 kb on + strand at 516.653 kb on - strand at 516.692 kb on + strand at 516.699 kb on + strand at 516.699 kb on + strand at 516.731 kb on - strand at 516.783 kb on + strand at 516.791 kb on + strand at 516.926 kb on + strand at 516.927 kb on - strand at 516.927 kb on - strand at 516.930 kb on + strand at 516.930 kb on + strand at 516.931 kb on - strand at 516.931 kb on - strand at 516.931 kb on - strand at 517.561 kb on + strand, within IAI46_02420 at 517.561 kb on + strand, within IAI46_02420 at 517.562 kb on - strand, within IAI46_02420 at 517.619 kb on + strand, within IAI46_02420 at 517.665 kb on + strand, within IAI46_02420 at 517.739 kb on + strand, within IAI46_02420 at 517.792 kb on + strand, within IAI46_02420 at 517.830 kb on + strand, within IAI46_02420 at 518.004 kb on - strand at 518.049 kb on - strand at 518.250 kb on - strand at 518.413 kb on - strand, within IAI46_02425 at 518.737 kb on - strand, within IAI46_02425 at 518.906 kb on + strand, within IAI46_02425 at 518.907 kb on - strand, within IAI46_02425 at 518.910 kb on + strand, within IAI46_02425 at 518.945 kb on + strand, within IAI46_02425
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, anaerobic remove 516,239 - IAI46_02415 0.24 -0.1 516,553 + IAI46_02415 0.76 +0.3 516,652 + -0.6 516,652 + -0.3 516,652 + +0.4 516,653 - +1.5 516,692 + +0.6 516,699 + +2.1 516,699 + +0.6 516,731 - +0.7 516,783 + +0.1 516,791 + +0.1 516,926 + -0.6 516,927 - +0.3 516,927 - +1.1 516,930 + +0.5 516,930 + -0.9 516,931 - -0.1 516,931 - +1.1 516,931 - +0.7 517,561 + IAI46_02420 0.64 -1.2 517,561 + IAI46_02420 0.64 +0.2 517,562 - IAI46_02420 0.64 -0.2 517,619 + IAI46_02420 0.69 -0.3 517,665 + IAI46_02420 0.73 +1.0 517,739 + IAI46_02420 0.79 +0.4 517,792 + IAI46_02420 0.84 +1.2 517,830 + IAI46_02420 0.87 +0.0 518,004 - +0.3 518,049 - +0.4 518,250 - +0.3 518,413 - IAI46_02425 0.15 -0.8 518,737 - IAI46_02425 0.26 +1.2 518,906 + IAI46_02425 0.32 +0.1 518,907 - IAI46_02425 0.32 -0.4 518,910 + IAI46_02425 0.32 +0.9 518,945 + IAI46_02425 0.33 -0.5
Or see this region's nucleotide sequence