Experiment: dichromate 20 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_01775 and IAI46_01780 are separated by 2 nucleotides IAI46_01780 and IAI46_01785 are separated by 52 nucleotides IAI46_01785 and IAI46_01790 are separated by 256 nucleotides
IAI46_01775: IAI46_01775 - translocation/assembly module TamB, at 384,040 to 387,858
_01775
IAI46_01780: IAI46_01780 - gamma-glutamylcyclotransferase, at 387,861 to 388,208
_01780
IAI46_01785: IAI46_01785 - inorganic diphosphatase, at 388,261 to 388,791
_01785
IAI46_01790: IAI46_01790 - Tar ligand binding domain-containing protein, at 389,048 to 390,601
_01790
Position (kb) 387
388
389 Strain fitness (log2 ratio) -1
0
1
2 at 386.862 kb on + strand, within IAI46_01775 at 386.863 kb on - strand, within IAI46_01775 at 386.863 kb on - strand, within IAI46_01775 at 386.913 kb on + strand, within IAI46_01775 at 386.914 kb on - strand, within IAI46_01775 at 386.914 kb on - strand, within IAI46_01775 at 386.932 kb on - strand, within IAI46_01775 at 387.052 kb on - strand, within IAI46_01775 at 387.212 kb on + strand, within IAI46_01775 at 387.310 kb on + strand, within IAI46_01775 at 387.310 kb on + strand, within IAI46_01775 at 387.310 kb on + strand, within IAI46_01775 at 387.310 kb on + strand, within IAI46_01775 at 387.311 kb on - strand, within IAI46_01775 at 387.381 kb on + strand, within IAI46_01775 at 387.382 kb on - strand, within IAI46_01775 at 387.382 kb on - strand, within IAI46_01775 at 387.397 kb on - strand, within IAI46_01775 at 387.514 kb on + strand at 387.515 kb on - strand at 387.558 kb on + strand at 387.559 kb on - strand at 387.579 kb on - strand at 387.641 kb on + strand at 387.642 kb on - strand at 387.660 kb on + strand at 387.703 kb on + strand at 387.703 kb on + strand at 387.719 kb on + strand at 387.719 kb on + strand at 387.720 kb on - strand at 387.720 kb on - strand at 387.725 kb on + strand at 387.726 kb on - strand at 387.789 kb on + strand at 387.790 kb on - strand at 387.790 kb on - strand at 387.796 kb on + strand at 387.869 kb on - strand at 387.886 kb on + strand at 388.013 kb on - strand, within IAI46_01780 at 388.027 kb on - strand, within IAI46_01780 at 388.086 kb on + strand, within IAI46_01780 at 388.087 kb on - strand, within IAI46_01780 at 388.088 kb on + strand, within IAI46_01780 at 388.088 kb on + strand, within IAI46_01780 at 388.089 kb on - strand, within IAI46_01780 at 388.089 kb on - strand, within IAI46_01780 at 388.131 kb on + strand, within IAI46_01780 at 388.140 kb on - strand, within IAI46_01780 at 388.140 kb on - strand, within IAI46_01780 at 388.140 kb on - strand, within IAI46_01780 at 388.140 kb on - strand, within IAI46_01780 at 388.169 kb on + strand, within IAI46_01780 at 388.241 kb on + strand at 388.262 kb on + strand at 388.262 kb on + strand at 388.263 kb on - strand at 388.913 kb on - strand at 388.930 kb on + strand at 388.966 kb on + strand at 388.966 kb on + strand at 388.966 kb on + strand at 388.967 kb on - strand at 388.970 kb on - strand at 389.000 kb on + strand at 389.001 kb on - strand at 389.001 kb on - strand at 389.009 kb on + strand at 389.010 kb on - strand at 389.010 kb on - strand at 389.010 kb on - strand at 389.010 kb on - strand at 389.013 kb on + strand at 389.014 kb on - strand at 389.014 kb on - strand at 389.025 kb on - strand at 389.052 kb on + strand at 389.167 kb on - strand at 389.167 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, anaerobic remove 386,862 + IAI46_01775 0.74 -0.9 386,863 - IAI46_01775 0.74 -0.2 386,863 - IAI46_01775 0.74 -0.9 386,913 + IAI46_01775 0.75 -0.1 386,914 - IAI46_01775 0.75 +0.3 386,914 - IAI46_01775 0.75 -0.0 386,932 - IAI46_01775 0.76 -0.3 387,052 - IAI46_01775 0.79 +0.3 387,212 + IAI46_01775 0.83 -0.9 387,310 + IAI46_01775 0.86 -1.0 387,310 + IAI46_01775 0.86 -0.2 387,310 + IAI46_01775 0.86 -1.3 387,310 + IAI46_01775 0.86 -0.8 387,311 - IAI46_01775 0.86 +0.9 387,381 + IAI46_01775 0.87 -0.1 387,382 - IAI46_01775 0.88 +0.1 387,382 - IAI46_01775 0.88 -0.5 387,397 - IAI46_01775 0.88 +0.2 387,514 + -0.5 387,515 - -0.1 387,558 + -0.1 387,559 - -0.8 387,579 - -0.2 387,641 + +0.7 387,642 - +0.0 387,660 + -0.6 387,703 + -0.7 387,703 + +1.0 387,719 + +0.4 387,719 + -0.6 387,720 - -0.2 387,720 - -0.1 387,725 + -0.8 387,726 - +0.4 387,789 + -0.2 387,790 - -0.3 387,790 - -1.0 387,796 + +0.1 387,869 - -0.1 387,886 + +1.9 388,013 - IAI46_01780 0.44 -0.7 388,027 - IAI46_01780 0.48 +0.2 388,086 + IAI46_01780 0.65 +0.7 388,087 - IAI46_01780 0.65 -0.6 388,088 + IAI46_01780 0.65 +1.2 388,088 + IAI46_01780 0.65 +1.1 388,089 - IAI46_01780 0.66 +0.5 388,089 - IAI46_01780 0.66 +0.5 388,131 + IAI46_01780 0.78 +1.1 388,140 - IAI46_01780 0.80 +1.0 388,140 - IAI46_01780 0.80 -0.6 388,140 - IAI46_01780 0.80 +2.3 388,140 - IAI46_01780 0.80 +1.3 388,169 + IAI46_01780 0.89 +1.2 388,241 + -0.8 388,262 + +1.6 388,262 + +0.5 388,263 - +0.9 388,913 - +0.9 388,930 + +0.5 388,966 + +0.7 388,966 + +0.5 388,966 + +0.0 388,967 - -0.1 388,970 - -0.2 389,000 + +0.0 389,001 - -0.0 389,001 - +0.3 389,009 + +0.6 389,010 - +0.8 389,010 - -1.0 389,010 - +1.1 389,010 - +0.3 389,013 + -0.1 389,014 - +0.0 389,014 - +0.2 389,025 - +0.1 389,052 + +0.1 389,167 - -0.4 389,167 - +0.3
Or see this region's nucleotide sequence