Strain Fitness in Serratia liquefaciens MT49

Strain Fitness in Serratia liquefaciens MT49 around IAI46_00045

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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Per-strain Table

Position	Strand	LocusTag	Fraction	dichromate 20 uM, anaerobic
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9,573	+	IAI46_00040	0.27	-0.3
9,604	+	IAI46_00040	0.29	+0.4
9,604	+	IAI46_00040	0.29	+0.4
9,605	-	IAI46_00040	0.29	+0.5
9,605	-	IAI46_00040	0.29	-0.5
9,605	-	IAI46_00040	0.29	+0.2
9,605	-	IAI46_00040	0.29	+0.3
9,606	+	IAI46_00040	0.29	+0.2
9,606	+	IAI46_00040	0.29	-0.8
9,607	-	IAI46_00040	0.30	-0.2
9,607	-	IAI46_00040	0.30	+0.1
9,607	-	IAI46_00040	0.30	-0.6
9,607	-	IAI46_00040	0.30	-0.0
9,638	+	IAI46_00040	0.32	+0.1
9,639	-	IAI46_00040	0.32	+0.6
9,639	-	IAI46_00040	0.32	-1.3
9,675	+	IAI46_00040	0.35	+0.1
9,675	+	IAI46_00040	0.35	-0.2
9,675	+	IAI46_00040	0.35	+0.1
9,676	-	IAI46_00040	0.35	+0.3
9,676	-	IAI46_00040	0.35	+0.5
9,679	+	IAI46_00040	0.35	+0.8
9,679	+	IAI46_00040	0.35	-0.6
9,679	+	IAI46_00040	0.35	+0.2
9,679	+	IAI46_00040	0.35	+1.0
9,679	+	IAI46_00040	0.35	+0.2
9,679	+	IAI46_00040	0.35	-0.4
9,680	-	IAI46_00040	0.35	-0.8
9,680	-	IAI46_00040	0.35	-0.0
9,680	-	IAI46_00040	0.35	-0.1
9,680	-	IAI46_00040	0.35	-0.4
9,681	+	IAI46_00040	0.35	-0.4
9,727	-	IAI46_00040	0.39	+0.3
9,788	-	IAI46_00040	0.44	+0.7
9,802	+	IAI46_00040	0.45	+0.5
9,802	+	IAI46_00040	0.45	-1.5
9,802	+	IAI46_00040	0.45	+0.1
9,803	-	IAI46_00040	0.45	+0.3
9,826	-	IAI46_00040	0.47	-0.0
9,898	+	IAI46_00040	0.52	+0.8
9,898	+	IAI46_00040	0.52	+0.2
9,898	+	IAI46_00040	0.52	-0.4
9,898	+	IAI46_00040	0.52	+0.3
9,899	-	IAI46_00040	0.52	-0.7
9,899	-	IAI46_00040	0.52	+0.3
9,902	+	IAI46_00040	0.53	-0.4
9,902	+	IAI46_00040	0.53	+0.4
9,903	-	IAI46_00040	0.53	-0.3
9,903	-	IAI46_00040	0.53	-0.1
9,903	-	IAI46_00040	0.53	-0.9
9,903	-	IAI46_00040	0.53	+0.5
9,903	-	IAI46_00040	0.53	-0.2
9,903	-	IAI46_00040	0.53	+0.1
9,903	-	IAI46_00040	0.53	-0.2
9,943	-	IAI46_00040	0.56	-0.9
9,986	+	IAI46_00040	0.59	-0.1
10,021	+	IAI46_00040	0.62	+0.9
10,021	+	IAI46_00040	0.62	-0.3
10,197	-	IAI46_00040	0.76	-0.6
10,197	-	IAI46_00040	0.76	-0.5
10,197	-	IAI46_00040	0.76	+0.4
10,220	+	IAI46_00040	0.77	+1.1
10,221	-	IAI46_00040	0.77	-1.1
10,221	-	IAI46_00040	0.77	+0.5
10,221	-	IAI46_00040	0.77	+0.8
10,425	+			-0.3
10,425	+			-0.4
10,430	+			-0.4
10,462	-			+0.1
10,547	+			-0.4
10,548	-			+1.0
10,673	+	IAI46_00045	0.37	+0.8
10,674	-	IAI46_00045	0.37	+0.3
10,681	+	IAI46_00045	0.39	+0.6
10,684	+	IAI46_00045	0.40	+0.8
10,684	+	IAI46_00045	0.40	+0.1
10,684	+	IAI46_00045	0.40	-0.6
10,684	+	IAI46_00045	0.40	-0.0
10,684	+	IAI46_00045	0.40	+0.5
10,685	-	IAI46_00045	0.40	-1.0
10,685	-	IAI46_00045	0.40	-0.0
10,685	-	IAI46_00045	0.40	-0.3
10,685	-	IAI46_00045	0.40	+0.0
10,685	-	IAI46_00045	0.40	+0.6
10,749	+	IAI46_00045	0.59	-0.0
10,750	-	IAI46_00045	0.59	-0.7
10,750	-	IAI46_00045	0.59	+0.1
10,750	-	IAI46_00045	0.59	-0.4
10,767	+	IAI46_00045	0.64	+0.9
10,768	-	IAI46_00045	0.64	+0.5
10,768	-	IAI46_00045	0.64	+0.2
10,768	-	IAI46_00045	0.64	-0.1
10,793	+	IAI46_00045	0.72	+0.0
10,793	+	IAI46_00045	0.72	-0.1
10,793	+	IAI46_00045	0.72	-0.3
10,794	-	IAI46_00045	0.72	+0.0
10,796	+	IAI46_00045	0.72	-0.3
10,796	+	IAI46_00045	0.72	+0.4
10,797	-	IAI46_00045	0.73	-0.7
10,825	+	IAI46_00045	0.81	+0.7
10,825	+	IAI46_00045	0.81	+0.8
10,825	+	IAI46_00045	0.81	+0.4
10,826	-	IAI46_00045	0.81	+0.0
10,826	-	IAI46_00045	0.81	-0.3
10,849	+	IAI46_00045	0.88	+0.1
10,870	+			+0.5
10,870	+			+0.4
10,871	-			-0.5
10,871	-			-0.1
10,871	-			-0.7
10,879	+			-0.7
10,932	+			+2.1
10,932	+			+0.3
10,932	+			-0.4
10,932	+			+0.3
10,932	+			-0.3
10,933	-			+1.3
10,933	-			-1.1
10,933	-			-0.6
10,933	-			-1.2
10,933	-			+0.4
10,933	-			+0.5
10,933	-			-1.3
10,934	+			-0.8
10,934	+			+0.6
10,954	-			+0.6
10,994	+			-0.2
10,994	+			-1.2
10,995	-			-0.4
11,000	-			-0.3
11,084	+			-0.0
11,084	+			+0.5
11,084	+			+0.1
11,130	+			-0.3
11,130	+			+0.0
11,131	-			-0.6
11,153	+			-0.8
11,153	+			+0.2
11,154	-			-0.6
11,154	-			-0.3
11,157	+			+0.1
11,158	-			+0.6
11,180	+			+0.5
11,193	+			-0.1
11,199	+			+1.7
11,200	-			-0.2
11,222	-			-0.1
11,302	+	IAI46_00050	0.26	+0.5
11,302	+	IAI46_00050	0.26	+1.2
11,302	+	IAI46_00050	0.26	+0.3
11,302	+	IAI46_00050	0.26	-0.1
11,303	-	IAI46_00050	0.26	-0.1
11,303	-	IAI46_00050	0.26	-1.3
11,304	+	IAI46_00050	0.27	+0.0
11,305	-	IAI46_00050	0.27	-0.1
11,405	+	IAI46_00050	0.51	-0.7
11,421	+	IAI46_00050	0.55	-0.4
11,446	+	IAI46_00050	0.61	-0.7
11,447	-	IAI46_00050	0.61	+0.4
11,450	+	IAI46_00050	0.62	-0.3
11,450	+	IAI46_00050	0.62	+0.5
11,450	+	IAI46_00050	0.62	+1.0
11,451	-	IAI46_00050	0.62	+0.7
11,451	-	IAI46_00050	0.62	-0.2
11,451	-	IAI46_00050	0.62	-0.2
11,451	-	IAI46_00050	0.62	+0.2
11,451	-	IAI46_00050	0.62	-0.2
11,452	+	IAI46_00050	0.62	-0.4
11,452	+	IAI46_00050	0.62	-0.2
11,452	+	IAI46_00050	0.62	-0.6
11,453	-	IAI46_00050	0.63	-0.5
11,453	-	IAI46_00050	0.63	-0.7
11,515	-	IAI46_00050	0.78	-0.1
11,515	-	IAI46_00050	0.78	+0.1
11,545	+	IAI46_00050	0.85	-0.9
11,545	+	IAI46_00050	0.85	+0.7
11,545	+	IAI46_00050	0.85	+0.1
11,546	-	IAI46_00050	0.85	+1.0
11,546	-	IAI46_00050	0.85	+0.5
11,553	+	IAI46_00050	0.87	+0.3
11,592	+			-0.2
11,594	+			+0.0
11,594	+			-0.6
11,612	+			-0.7
11,613	-			-1.4
11,669	+			+0.1
11,669	+			-0.5
11,674	+			+0.6
11,675	-			+0.1
11,675	-			-0.4
11,679	+			+0.4
11,684	+			+0.5
11,685	-			+0.9
11,687	-			+1.0
11,698	+			+0.4
11,704	+			-0.3
11,719	+			+0.1
11,719	+			-0.1
11,720	-			+1.5
11,720	-			-0.1
11,720	-			+0.3
11,720	-			-0.5
11,720	-			-0.2
11,730	+			-0.4
11,730	+			+2.2
11,730	+			-0.5
11,730	+			+0.4
11,731	-			-0.5
11,741	+			+0.9
11,741	+			+1.4
11,741	+			-0.0
11,741	+			+0.1
11,835	+	IAI46_00055	0.23	+0.2

Or see this region's nucleotide sequence