Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4199

Experiment: marine broth

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth
5,013,171	+		Echvi_4197	0.87	+0.3
5,013,193	+		Echvi_4197	0.89	+1.4
5,013,193	+		Echvi_4197	0.89	+0.6
5,013,194	-		Echvi_4197	0.89	+0.4
5,013,324	+				+0.8
5,013,325	-				+0.9
5,013,325	-				-0.1
5,013,325	-				+0.6
5,013,325	-				+0.2
5,013,371	+				-0.4
5,013,372	-				+0.9
5,013,372	-				+0.3
5,013,372	-				-0.5
5,013,390	-				-0.4
5,013,390	-				-2.0
5,013,390	-				-0.2
5,013,390	-				-0.1
5,013,390	-				+0.8
5,013,390	-				+0.0
5,013,394	-				+0.4
5,013,518	+		Echvi_4198	0.21	-0.6
5,013,536	+		Echvi_4198	0.23	-0.3
5,013,542	-		Echvi_4198	0.24	+1.1
5,013,542	-		Echvi_4198	0.24	-0.6
5,013,550	-		Echvi_4198	0.25	+1.1
5,013,588	+		Echvi_4198	0.30	+0.3
5,013,600	+		Echvi_4198	0.32	-0.6
5,013,600	+		Echvi_4198	0.32	+0.0
5,013,600	+		Echvi_4198	0.32	+2.1
5,013,604	-		Echvi_4198	0.32	+0.7
5,013,604	-		Echvi_4198	0.32	-0.1
5,013,621	+		Echvi_4198	0.34	+0.2
5,013,728	+		Echvi_4198	0.48	+0.7
5,013,728	+		Echvi_4198	0.48	+0.9
5,013,729	-		Echvi_4198	0.48	+1.1
5,013,729	-		Echvi_4198	0.48	-1.1
5,013,729	-		Echvi_4198	0.48	-0.7
5,013,729	-		Echvi_4198	0.48	+0.2
5,013,729	-		Echvi_4198	0.48	-0.3
5,013,730	+		Echvi_4198	0.48	+0.5
5,013,730	+		Echvi_4198	0.48	+0.3
5,013,731	-		Echvi_4198	0.49	-1.4
5,013,731	-		Echvi_4198	0.49	-0.5
5,013,768	+		Echvi_4198	0.53	+1.4
5,013,784	+		Echvi_4198	0.55	-0.8
5,013,809	+		Echvi_4198	0.59	-0.1
5,013,809	+		Echvi_4198	0.59	-0.6
5,013,947	+		Echvi_4198	0.77	+1.9
5,013,948	-		Echvi_4198	0.77	+0.1
5,013,982	-		Echvi_4198	0.81	+0.2
5,013,982	-		Echvi_4198	0.81	+0.1
5,013,982	-		Echvi_4198	0.81	-0.9
5,014,006	+		Echvi_4198	0.84	-0.3
5,014,007	-		Echvi_4198	0.84	+0.0
5,014,011	-		Echvi_4198	0.85	-0.6
5,014,011	-		Echvi_4198	0.85	+0.8
5,014,011	-		Echvi_4198	0.85	+1.1
5,014,012	+		Echvi_4198	0.85	+0.1
5,014,012	+		Echvi_4198	0.85	+0.7
5,014,013	-		Echvi_4198	0.85	+0.5
5,014,023	+		Echvi_4198	0.86	+0.7
5,014,092	+				-0.5
5,014,092	+				-0.6
5,014,127	+				+0.5
5,014,128	-				-1.0
5,014,170	+				+0.0
5,014,170	+				-1.6
5,014,170	+				-1.1
5,014,170	+				+0.1
5,014,212	+				-0.4
5,014,212	+				-1.6
5,014,213	-				-0.2
5,014,216	+				-0.4
5,014,217	-				+0.4
5,014,217	-				+0.2
5,014,242	+				-1.4
5,014,242	+				-1.2
5,014,248	+				-1.4
5,014,274	+				+0.3
5,014,274	+				+0.3
5,014,275	-				-2.8
5,014,306	+		Echvi_4199	0.11	+0.9
5,014,306	+		Echvi_4199	0.11	-0.1
5,014,306	+		Echvi_4199	0.11	-0.0
5,014,306	+		Echvi_4199	0.11	+0.2
5,014,306	+		Echvi_4199	0.11	-0.4
5,014,307	-		Echvi_4199	0.11	-0.1
5,014,307	-		Echvi_4199	0.11	-0.3
5,014,307	-		Echvi_4199	0.11	-0.1
5,014,402	+		Echvi_4199	0.19	-0.6
5,014,422	+		Echvi_4199	0.20	+0.4
5,014,440	-		Echvi_4199	0.22	-0.5
5,014,525	+		Echvi_4199	0.29	-0.5
5,014,532	-		Echvi_4199	0.29	+1.1
5,014,532	-		Echvi_4199	0.29	-0.3
5,014,561	+		Echvi_4199	0.31	-1.2
5,014,610	-		Echvi_4199	0.35	+0.6
5,014,611	+		Echvi_4199	0.35	-0.7
5,014,621	+		Echvi_4199	0.36	-1.5
5,014,629	+		Echvi_4199	0.37	-0.3
5,014,630	-		Echvi_4199	0.37	-0.2
5,014,630	-		Echvi_4199	0.37	-1.0
5,014,630	-		Echvi_4199	0.37	+0.7
5,014,687	+		Echvi_4199	0.42	-0.5
5,014,717	+		Echvi_4199	0.44	-0.4
5,014,723	-		Echvi_4199	0.44	-1.9
5,014,723	-		Echvi_4199	0.44	-1.5
5,014,723	-		Echvi_4199	0.44	-2.9
5,014,737	+		Echvi_4199	0.46	-1.2
5,014,737	+		Echvi_4199	0.46	-0.2
5,014,738	-		Echvi_4199	0.46	+0.1
5,014,738	-		Echvi_4199	0.46	+0.3
5,014,746	+		Echvi_4199	0.46	+1.5
5,014,746	+		Echvi_4199	0.46	+0.6
5,014,777	+		Echvi_4199	0.49	-0.5
5,014,777	+		Echvi_4199	0.49	+0.0
5,014,777	+		Echvi_4199	0.49	+0.3
5,014,777	+		Echvi_4199	0.49	+0.7
5,014,777	+		Echvi_4199	0.49	-0.1
5,014,777	+		Echvi_4199	0.49	+1.2
5,014,777	+		Echvi_4199	0.49	-2.5
5,014,777	+		Echvi_4199	0.49	-0.0
5,014,777	+		Echvi_4199	0.49	-0.4
5,014,778	-		Echvi_4199	0.49	-0.0
5,014,778	-		Echvi_4199	0.49	-0.3
5,014,778	-		Echvi_4199	0.49	-1.1
5,014,778	-		Echvi_4199	0.49	-0.2
5,014,778	-		Echvi_4199	0.49	-0.4
5,014,779	+		Echvi_4199	0.49	-1.4
5,014,779	+		Echvi_4199	0.49	-0.1
5,014,779	+		Echvi_4199	0.49	+0.4
5,014,779	+		Echvi_4199	0.49	+0.5
5,014,779	+		Echvi_4199	0.49	-1.7
5,014,780	-		Echvi_4199	0.49	+1.6
5,014,780	-		Echvi_4199	0.49	-1.4
5,014,780	-		Echvi_4199	0.49	+0.8
5,014,780	-		Echvi_4199	0.49	+2.0
5,014,780	-		Echvi_4199	0.49	+0.3
5,014,804	-		Echvi_4199	0.51	-0.9
5,014,823	-		Echvi_4199	0.52	+1.6
5,014,862	-		Echvi_4199	0.56	+1.5
5,014,862	-		Echvi_4199	0.56	-0.7
5,014,925	+		Echvi_4199	0.61	-0.0
5,014,925	+		Echvi_4199	0.61	-0.6
5,014,926	-		Echvi_4199	0.61	+0.0
5,014,957	+		Echvi_4199	0.63	-0.2
5,014,967	+		Echvi_4199	0.64	+0.1
5,014,976	-		Echvi_4199	0.65	+0.1
5,014,976	-		Echvi_4199	0.65	-0.8
5,014,982	-		Echvi_4199	0.65	+0.7
5,015,006	-		Echvi_4199	0.67	-0.8
5,015,007	+		Echvi_4199	0.67	-1.7
5,015,007	+				+2.7
5,015,008	-		Echvi_4199	0.67	-0.2
5,015,028	+		Echvi_4199	0.69	-0.5
5,015,028	+		Echvi_4199	0.69	+0.8
5,015,028	+		Echvi_4199	0.69	-0.1
5,015,031	-		Echvi_4199	0.69	+0.5
5,015,036	-		Echvi_4199	0.69	-1.0
5,015,036	-		Echvi_4199	0.69	-0.7
5,015,036	-		Echvi_4199	0.69	-1.4
5,015,053	+		Echvi_4199	0.71	-1.1
5,015,143	-				+2.7
5,015,217	-		Echvi_4199	0.84	+0.2
5,015,236	+		Echvi_4199	0.85	-1.1
5,015,259	-		Echvi_4199	0.87	-0.9
5,015,276	+		Echvi_4199	0.89	-0.2
5,015,305	-				+0.6
5,015,364	-				+0.1
5,015,376	-				+0.5
5,015,420	+				-1.2
5,015,421	-				+0.7
5,015,424	-				+0.8
5,015,447	-				+0.7
5,015,453	-				+1.9
5,015,457	-				-0.2
5,015,457	-				-0.7
5,015,460	+				+0.0
5,015,460	+				-0.6
5,015,465	+				+0.8
5,015,523	+				+0.4
5,015,523	+				-0.3
5,015,524	-				-0.5
5,015,529	-				-2.7
5,015,551	-				-0.7
5,015,588	-				+1.5
5,015,591	+				-0.4
5,015,591	+				-0.2
5,015,591	+				+0.0
5,015,656	-				-0.3
5,015,724	+		Echvi_4200	0.13	+1.0
5,015,725	-		Echvi_4200	0.13	+0.9
5,015,748	+		Echvi_4200	0.14	-0.4
5,015,748	+		Echvi_4200	0.14	-1.2
5,015,794	+		Echvi_4200	0.17	-0.4
5,015,796	+		Echvi_4200	0.17	-2.0
5,015,797	-		Echvi_4200	0.17	-0.0
5,015,807	+		Echvi_4200	0.17	+1.6
5,015,807	+		Echvi_4200	0.17	-0.7
5,015,808	-		Echvi_4200	0.18	+1.9
5,015,808	-		Echvi_4200	0.18	+0.5
5,015,808	-		Echvi_4200	0.18	-2.0
5,015,811	+		Echvi_4200	0.18	-0.6
5,015,812	-		Echvi_4200	0.18	-0.4
5,015,827	+		Echvi_4200	0.19	+1.7
5,015,869	+		Echvi_4200	0.21	+0.1
5,015,869	+		Echvi_4200	0.21	-0.6
5,015,869	+		Echvi_4200	0.21	+0.0
5,015,869	+		Echvi_4200	0.21	+0.2
5,015,869	+		Echvi_4200	0.21	-1.4
5,015,869	+		Echvi_4200	0.21	-0.4
5,015,869	+		Echvi_4200	0.21	-0.0
5,015,869	+		Echvi_4200	0.21	+0.7
5,015,870	-		Echvi_4200	0.21	+0.2
5,015,870	-		Echvi_4200	0.21	+1.4
5,015,870	-		Echvi_4200	0.21	+0.4
5,015,870	-		Echvi_4200	0.21	+0.4
5,015,870	-		Echvi_4200	0.21	-0.1
5,015,870	-		Echvi_4200	0.21	+0.9
5,015,870	-		Echvi_4200	0.21	-2.6
5,015,870	-		Echvi_4200	0.21	-1.8
5,015,871	+		Echvi_4200	0.21	+0.1
5,015,871	+		Echvi_4200	0.21	-0.2
5,015,951	-		Echvi_4200	0.25	+0.2
5,015,951	-		Echvi_4200	0.25	+0.2
5,015,965	-		Echvi_4200	0.26	+1.4
5,015,995	-		Echvi_4200	0.27	-0.4
5,015,996	+		Echvi_4200	0.27	-0.1
5,016,018	-		Echvi_4200	0.28	-0.0
5,016,092	+		Echvi_4200	0.32	+1.8
5,016,092	+		Echvi_4200	0.32	+0.0
5,016,093	-		Echvi_4200	0.32	-2.7
5,016,093	-		Echvi_4200	0.32	-0.7
5,016,093	-		Echvi_4200	0.32	-0.7
5,016,093	-		Echvi_4200	0.32	+0.6
5,016,103	-		Echvi_4200	0.33	-0.6
5,016,129	+		Echvi_4200	0.34	+0.8
5,016,130	-		Echvi_4200	0.34	+1.6
5,016,142	-		Echvi_4200	0.35	-0.7
5,016,144	+		Echvi_4200	0.35	+0.5
5,016,164	-		Echvi_4200	0.36	+0.2
5,016,265	+		Echvi_4200	0.41	-0.1
5,016,265	+		Echvi_4200	0.41	+0.1
5,016,266	-		Echvi_4200	0.41	-0.5
5,016,346	+		Echvi_4200	0.45	+1.0
5,016,352	+		Echvi_4200	0.45	+0.6
5,016,353	-		Echvi_4200	0.45	+0.7
5,016,353	-		Echvi_4200	0.45	-0.3
5,016,355	+		Echvi_4200	0.45	+0.7
5,016,355	+		Echvi_4200	0.45	-3.2
5,016,355	+		Echvi_4200	0.45	-1.6
5,016,356	-		Echvi_4200	0.45	-1.2
5,016,356	-		Echvi_4200	0.45	-0.6
5,016,356	-		Echvi_4200	0.45	+2.0
5,016,356	-		Echvi_4200	0.45	-1.2
5,016,363	+		Echvi_4200	0.46	-1.9
5,016,364	-		Echvi_4200	0.46	-0.4
5,016,367	-		Echvi_4200	0.46	+0.1
5,016,367	-		Echvi_4200	0.46	-1.1
5,016,401	+		Echvi_4200	0.48	-0.3
5,016,402	-		Echvi_4200	0.48	-0.7