Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2540

Experiment: marine broth

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth
3,015,037	-		Echvi_2539	0.29	+0.6
3,015,078	+		Echvi_2539	0.33	+1.7
3,015,105	+		Echvi_2539	0.36	-0.3
3,015,234	+		Echvi_2539	0.49	-0.8
3,015,234	+		Echvi_2539	0.49	+0.2
3,015,234	+		Echvi_2539	0.49	-0.0
3,015,234	+		Echvi_2539	0.49	-0.5
3,015,235	-		Echvi_2539	0.49	-1.0
3,015,235	-		Echvi_2539	0.49	-2.1
3,015,237	-		Echvi_2539	0.49	-0.1
3,015,257	-		Echvi_2539	0.51	+0.7
3,015,257	-		Echvi_2539	0.51	-2.0
3,015,260	+		Echvi_2539	0.51	-0.5
3,015,273	+		Echvi_2539	0.53	-0.3
3,015,274	-		Echvi_2539	0.53	-2.6
3,015,274	-		Echvi_2539	0.53	-0.9
3,015,278	+		Echvi_2539	0.53	+0.1
3,015,295	+		Echvi_2539	0.55	-0.0
3,015,340	-		Echvi_2539	0.60	-0.1
3,015,343	+		Echvi_2539	0.60	-0.8
3,015,344	-		Echvi_2539	0.60	-0.0
3,015,443	+		Echvi_2539	0.70	-1.0
3,015,484	-		Echvi_2539	0.74	-0.9
3,015,484	-		Echvi_2539	0.74	-1.3
3,015,518	-		Echvi_2539	0.78	-0.3
3,015,536	-		Echvi_2539	0.80	+2.1
3,015,608	-		Echvi_2539	0.87	+1.3
3,015,636	-		Echvi_2539	0.90	+0.1
3,015,697	-				-0.4
3,015,792	+				+1.0
3,015,811	-				-1.6
3,015,811	-				+1.0
3,015,811	-				+1.2
3,015,834	-				+0.1
3,015,866	-				+0.4
3,015,866	-				+0.1
3,015,866	-				+0.0
3,015,887	+				-1.8
3,015,888	-				+0.6
3,015,909	-				-0.3
3,015,938	-				-0.7
3,015,940	-				+1.7
3,015,940	-				+0.7
3,015,940	-				+1.0
3,015,944	+				+0.4
3,015,945	-				+0.2
3,015,966	-				-0.5
3,015,966	-				+0.8
3,016,000	-				+0.1
3,016,031	-				+0.3
3,016,042	-				-1.6
3,016,065	+				-0.4
3,016,065	+				+0.5
3,016,065	+				-1.2
3,016,065	+				+0.4
3,016,065	+				+0.6
3,016,066	-				+0.7
3,016,066	-				-0.7
3,016,069	+				-0.1
3,016,069	+				-0.9
3,016,070	-				+0.0
3,016,070	-				+1.0
3,016,070	-				-0.6
3,016,112	-				-0.5
3,016,112	-				+1.2
3,016,165	+				+0.3
3,016,165	+				-0.1
3,016,205	-				-3.7
3,016,248	-		Echvi_2540	0.10	-1.6
3,016,248	-		Echvi_2540	0.10	-0.7
3,016,249	+		Echvi_2540	0.10	+0.1
3,016,249	+		Echvi_2540	0.10	-3.6
3,016,249	+		Echvi_2540	0.10	+0.9
3,016,249	+		Echvi_2540	0.10	-0.3
3,016,250	-		Echvi_2540	0.11	+1.1
3,016,250	-		Echvi_2540	0.11	+1.9
3,016,250	-		Echvi_2540	0.11	+1.0
3,016,250	-		Echvi_2540	0.11	+0.8
3,016,262	-		Echvi_2540	0.11	+0.2
3,016,262	-		Echvi_2540	0.11	+0.7
3,016,312	+		Echvi_2540	0.13	-0.1
3,016,312	+		Echvi_2540	0.13	+0.5
3,016,312	+		Echvi_2540	0.13	+0.6
3,016,312	+		Echvi_2540	0.13	+0.6
3,016,313	-		Echvi_2540	0.13	+0.7
3,016,313	-		Echvi_2540	0.13	-0.8
3,016,313	-		Echvi_2540	0.13	+0.4
3,016,313	-		Echvi_2540	0.13	-0.1
3,016,395	+		Echvi_2540	0.17	+0.4
3,016,396	-		Echvi_2540	0.17	-1.1
3,016,459	-		Echvi_2540	0.19	+0.5
3,016,480	-		Echvi_2540	0.20	+1.0
3,016,592	+		Echvi_2540	0.25	-0.0
3,016,592	+		Echvi_2540	0.25	-0.1
3,016,608	+		Echvi_2540	0.26	+1.1
3,016,609	-		Echvi_2540	0.26	-0.1
3,016,661	+		Echvi_2540	0.28	-1.6
3,016,661	+		Echvi_2540	0.28	-0.3
3,016,661	+		Echvi_2540	0.28	-0.5
3,016,662	-		Echvi_2540	0.28	+0.4
3,016,663	+		Echvi_2540	0.28	-0.5
3,016,663	+		Echvi_2540	0.28	+1.3
3,016,685	+		Echvi_2540	0.29	+0.7
3,016,717	+		Echvi_2540	0.30	-0.0
3,016,739	-		Echvi_2540	0.31	-1.7
3,016,739	-		Echvi_2540	0.31	+1.9
3,016,807	-		Echvi_2540	0.34	-0.1
3,016,848	-		Echvi_2540	0.36	+0.0
3,016,885	+		Echvi_2540	0.37	-1.6
3,016,886	-		Echvi_2540	0.37	-1.6
3,016,892	-		Echvi_2540	0.38	-0.1
3,016,904	+		Echvi_2540	0.38	+0.7
3,016,905	-		Echvi_2540	0.38	+0.8
3,016,910	+		Echvi_2540	0.38	+1.2
3,016,911	-		Echvi_2540	0.38	+0.6
3,016,936	+		Echvi_2540	0.39	-0.2
3,016,936	+		Echvi_2540	0.39	-1.3
3,016,955	-		Echvi_2540	0.40	+0.4
3,017,007	+		Echvi_2540	0.42	+1.9
3,017,107	+		Echvi_2540	0.47	+0.7
3,017,111	+		Echvi_2540	0.47	+1.1
3,017,111	+		Echvi_2540	0.47	-0.5
3,017,111	+				+0.1
3,017,112	-		Echvi_2540	0.47	+0.3
3,017,112	-		Echvi_2540	0.47	-1.1
3,017,112	-		Echvi_2540	0.47	-1.4
3,017,155	+		Echvi_2540	0.49	+0.9
3,017,155	+		Echvi_2540	0.49	+0.6
3,017,156	-		Echvi_2540	0.49	-0.6
3,017,183	-		Echvi_2540	0.50	+1.1
3,017,207	+		Echvi_2540	0.51	+0.8
3,017,209	+		Echvi_2540	0.51	-0.8
3,017,210	-		Echvi_2540	0.51	+0.0
3,017,210	-		Echvi_2540	0.51	+0.9
3,017,225	-		Echvi_2540	0.52	+1.9
3,017,248	+		Echvi_2540	0.53	-0.0
3,017,258	-		Echvi_2540	0.53	+0.6
3,017,294	-		Echvi_2540	0.55	+0.2
3,017,297	+		Echvi_2540	0.55	+0.5
3,017,297	+		Echvi_2540	0.55	+0.9
3,017,298	-		Echvi_2540	0.55	+1.2
3,017,298	-		Echvi_2540	0.55	+0.4
3,017,298	-		Echvi_2540	0.55	+1.4
3,017,298	-		Echvi_2540	0.55	+0.1
3,017,299	+		Echvi_2540	0.55	+1.1
3,017,300	-		Echvi_2540	0.55	-0.3
3,017,323	+		Echvi_2540	0.56	-2.6
3,017,352	+		Echvi_2540	0.57	+0.9
3,017,352	+		Echvi_2540	0.57	-1.2
3,017,352	+		Echvi_2540	0.57	+0.7
3,017,353	-		Echvi_2540	0.57	-0.4
3,017,444	-		Echvi_2540	0.61	-0.4
3,017,448	-		Echvi_2540	0.61	+0.3
3,017,448	-		Echvi_2540	0.61	-0.1
3,017,467	+		Echvi_2540	0.62	+0.7
3,017,468	-		Echvi_2540	0.62	-2.1
3,017,543	+		Echvi_2540	0.65	-0.3
3,017,543	+		Echvi_2540	0.65	+0.6
3,017,543	+		Echvi_2540	0.65	-1.3
3,017,543	+		Echvi_2540	0.65	-0.0
3,017,543	+		Echvi_2540	0.65	+1.4
3,017,543	+		Echvi_2540	0.65	-1.8
3,017,543	+		Echvi_2540	0.65	+0.5
3,017,543	+		Echvi_2540	0.65	-0.9
3,017,543	+		Echvi_2540	0.65	+0.7
3,017,544	-		Echvi_2540	0.65	+0.8
3,017,544	-		Echvi_2540	0.65	-0.7
3,017,544	-		Echvi_2540	0.65	+0.5
3,017,544	-		Echvi_2540	0.65	-0.2
3,017,545	+		Echvi_2540	0.65	-0.2
3,017,545	+		Echvi_2540	0.65	-0.2
3,017,545	+		Echvi_2540	0.65	+0.9
3,017,545	+		Echvi_2540	0.65	-0.1
3,017,545	+		Echvi_2540	0.65	-0.1
3,017,546	-		Echvi_2540	0.65	-0.1
3,017,546	-		Echvi_2540	0.65	-0.7
3,017,546	-		Echvi_2540	0.65	+0.4
3,017,546	-		Echvi_2540	0.65	-0.8
3,017,568	+		Echvi_2540	0.66	+0.6
3,017,597	+		Echvi_2540	0.67	+0.2
3,017,598	-		Echvi_2540	0.67	+0.9
3,017,703	-		Echvi_2540	0.72	-1.3
3,017,706	-		Echvi_2540	0.72	+1.1
3,017,708	-		Echvi_2540	0.72	+1.0
3,017,725	+		Echvi_2540	0.73	-1.4
3,017,725	+		Echvi_2540	0.73	+0.8
3,017,726	-		Echvi_2540	0.73	+0.2
3,017,726	-		Echvi_2540	0.73	-0.2
3,017,726	-		Echvi_2540	0.73	-0.4
3,017,726	-		Echvi_2540	0.73	-2.1
3,017,726	-		Echvi_2540	0.73	+0.9
3,017,726	-		Echvi_2540	0.73	+1.5
3,017,726	-		Echvi_2540	0.73	-0.2
3,017,730	-		Echvi_2540	0.73	+0.5
3,017,730	-		Echvi_2540	0.73	+0.1
3,017,750	+		Echvi_2540	0.74	-1.1
3,017,751	-		Echvi_2540	0.74	-1.6
3,017,753	+		Echvi_2540	0.74	+1.3
3,017,753	+		Echvi_2540	0.74	-0.8
3,017,755	+		Echvi_2540	0.74	+1.2
3,017,755	+		Echvi_2540	0.74	+1.3
3,017,755	+		Echvi_2540	0.74	-1.1
3,017,755	+		Echvi_2540	0.74	-0.2
3,017,755	+		Echvi_2540	0.74	+0.1
3,017,807	-		Echvi_2540	0.76	+0.3
3,017,853	-		Echvi_2540	0.78	-0.5
3,017,910	-		Echvi_2540	0.81	+2.5
3,017,910	-		Echvi_2540	0.81	-1.1
3,017,910	-		Echvi_2540	0.81	-1.3
3,018,078	-		Echvi_2540	0.88	-1.0
3,018,088	+		Echvi_2540	0.88	-1.3
3,018,088	+		Echvi_2540	0.88	-1.1
3,018,088	+		Echvi_2540	0.88	-0.3
3,018,088	+		Echvi_2540	0.88	-0.5
3,018,092	+		Echvi_2540	0.88	+0.6
3,018,092	+		Echvi_2540	0.88	+0.4
3,018,093	-		Echvi_2540	0.88	+0.7
3,018,123	-		Echvi_2540	0.90	+0.6
3,018,140	-				-0.9
3,018,155	+				-0.3
3,018,190	+				-0.2
3,018,197	-				-0.6
3,018,234	-				-1.5
3,018,243	-				-0.5
3,018,336	+				+1.0
3,018,336	+				+0.2
3,018,337	-				+0.4
3,018,337	-				-3.1
3,018,350	+				-1.5
3,018,395	+				+0.8
3,018,396	-				+0.7
3,018,399	-				+0.6
3,018,509	-		Echvi_2541	0.17	-1.1
3,018,510	+		Echvi_2541	0.17	+2.1
3,018,510	+		Echvi_2541	0.17	-0.3
3,018,533	+		Echvi_2541	0.20	+0.9
3,018,541	+		Echvi_2541	0.21	-1.3
3,018,554	+		Echvi_2541	0.23	-0.7
3,018,577	+		Echvi_2541	0.26	-2.2
3,018,577	+		Echvi_2541	0.26	+2.0
3,018,577	+		Echvi_2541	0.26	-0.8
3,018,578	-		Echvi_2541	0.26	-0.9
3,018,679	+		Echvi_2541	0.38	-0.2
3,018,680	-		Echvi_2541	0.38	+1.8
3,018,680	-		Echvi_2541	0.38	+0.4
3,018,680	-		Echvi_2541	0.38	+0.5
3,018,680	-		Echvi_2541	0.38	-0.1
3,018,680	-		Echvi_2541	0.38	+0.5
3,018,682	-		Echvi_2541	0.38	-0.6
3,018,712	+		Echvi_2541	0.42	+0.3
3,018,712	+		Echvi_2541	0.42	-0.7
3,018,713	-		Echvi_2541	0.42	-1.6
3,018,713	-		Echvi_2541	0.42	+0.5
3,018,713	-		Echvi_2541	0.42	+0.5
3,018,713	-		Echvi_2541	0.42	-2.2
3,018,806	-		Echvi_2541	0.54	+0.3
3,018,809	-		Echvi_2541	0.54	-0.1
3,018,820	+		Echvi_2541	0.55	-1.4
3,018,853	+		Echvi_2541	0.59	-0.3
3,018,854	-		Echvi_2541	0.59	-0.4
3,018,861	+		Echvi_2541	0.60	-0.2
3,018,885	-		Echvi_2541	0.63	-0.5
3,018,887	-		Echvi_2541	0.63	+0.4
3,018,887	-		Echvi_2541	0.63	-1.0
3,018,887	-		Echvi_2541	0.63	-1.6
3,018,937	+		Echvi_2541	0.70	+1.2
3,018,937	+		Echvi_2541	0.70	+1.8
3,018,940	-		Echvi_2541	0.70	+2.3
3,018,949	+		Echvi_2541	0.71	-0.0
3,018,950	-		Echvi_2541	0.71	-1.4
3,018,950	-		Echvi_2541	0.71	+1.4
3,018,950	-		Echvi_2541	0.71	-0.5
3,018,950	-		Echvi_2541	0.71	-0.2
3,018,950	-		Echvi_2541	0.71	+0.0
3,018,951	+		Echvi_2541	0.71	-0.3
3,018,992	+		Echvi_2541	0.76	-0.9
3,019,012	+		Echvi_2541	0.79	+0.1
3,019,012	+		Echvi_2541	0.79	+0.5
3,019,012	+		Echvi_2541	0.79	+1.4
3,019,012	+		Echvi_2541	0.79	-0.7
3,019,013	-		Echvi_2541	0.79	+0.4
3,019,013	-		Echvi_2541	0.79	+0.8
3,019,035	+		Echvi_2541	0.82	+0.1
3,019,036	-		Echvi_2541	0.82	+1.4
3,019,045	+		Echvi_2541	0.83	-0.5
3,019,045	+		Echvi_2541	0.83	+1.6
3,019,102	-		Echvi_2541	0.90	+1.4
3,019,219	+				-0.8
3,019,220	-				+0.4
3,019,220	-				-0.8
3,019,285	+				+0.4
3,019,288	+				-1.1
3,019,289	-				+0.1
3,019,306	+				+1.4
3,019,306	+				+1.0
3,019,343	+				-0.8
3,019,345	+				-0.8
3,019,345	+				+0.3
3,019,345	+				+1.0
3,019,345	+				-0.5
3,019,345	+				+1.0
3,019,346	-				-0.1
3,019,346	-				+0.2
3,019,346	-				-1.1
3,019,346	-				-1.8
3,019,346	-				-0.6
3,019,353	+				-2.1
3,019,354	-				-0.0
3,019,358	+				+0.6
3,019,358	+				+0.4