Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1976

Experiment: marine broth

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth
2,326,874	+		Echvi_1974	0.28	+0.7
2,326,874	+		Echvi_1974	0.28	-0.5
2,326,874	+		Echvi_1974	0.28	+0.3
2,326,874	+		Echvi_1974	0.28	-1.1
2,326,874	+		Echvi_1974	0.28	-0.5
2,326,874	+		Echvi_1974	0.28	-0.2
2,326,874	+		Echvi_1974	0.28	-0.7
2,326,875	-		Echvi_1974	0.29	+0.8
2,326,875	-		Echvi_1974	0.29	+1.7
2,326,875	-		Echvi_1974	0.29	-0.4
2,326,875	-		Echvi_1974	0.29	+2.1
2,326,875	-		Echvi_1974	0.29	+0.2
2,326,875	-		Echvi_1974	0.29	-0.5
2,326,876	+		Echvi_1974	0.29	-0.8
2,326,876	+		Echvi_1974	0.29	+0.1
2,326,877	-		Echvi_1974	0.29	+0.0
2,326,877	-		Echvi_1974	0.29	-1.0
2,326,877	-		Echvi_1974	0.29	-1.0
2,326,877	-		Echvi_1974	0.29	+0.0
2,326,877	-		Echvi_1974	0.29	-0.4
2,326,877	-		Echvi_1974	0.29	-1.0
2,326,877	-		Echvi_1974	0.29	+1.2
2,326,877	-		Echvi_1974	0.29	-0.2
2,326,878	+		Echvi_1974	0.29	+0.6
2,326,879	-		Echvi_1974	0.29	+0.2
2,326,897	+		Echvi_1974	0.32	-0.0
2,326,898	-		Echvi_1974	0.33	-0.4
2,326,947	-		Echvi_1974	0.41	-0.6
2,326,996	+		Echvi_1974	0.49	-0.3
2,326,996	+		Echvi_1974	0.49	-0.1
2,326,997	-		Echvi_1974	0.49	+1.1
2,326,997	-		Echvi_1974	0.49	+0.2
2,326,999	+		Echvi_1974	0.49	+0.5
2,327,081	+		Echvi_1974	0.63	-0.3
2,327,082	-		Echvi_1974	0.63	+0.7
2,327,133	-		Echvi_1974	0.72	-1.1
2,327,157	-		Echvi_1974	0.76	-1.4
2,327,183	+		Echvi_1974	0.80	+0.9
2,327,183	+		Echvi_1974	0.80	-1.7
2,327,266	-				+0.2
2,327,266	-				+0.9
2,327,278	+				+0.6
2,327,284	+				-0.7
2,327,285	-				+0.4
2,327,285	-				-0.8
2,327,303	-				-0.3
2,327,309	+				+1.3
2,327,343	-				+0.1
2,327,374	-				-1.3
2,327,381	-				+2.2
2,327,390	+				+1.2
2,327,390	+				+0.1
2,327,391	-				+1.7
2,327,394	+				-0.4
2,327,394	+				-0.4
2,327,394	+				-0.4
2,327,394	+				+0.0
2,327,394	+				+0.3
2,327,399	+				+0.1
2,327,412	+				+0.2
2,327,455	+				-1.9
2,327,478	+				+0.3
2,327,533	+		Echvi_1975	0.22	-2.6
2,327,534	-		Echvi_1975	0.22	+0.2
2,327,534	-		Echvi_1975	0.22	-1.0
2,327,534	-		Echvi_1975	0.22	+0.8
2,327,564	-		Echvi_1975	0.29	-0.5
2,327,596	-		Echvi_1975	0.37	+0.1
2,327,617	-		Echvi_1975	0.43	-1.5
2,327,658	+		Echvi_1975	0.53	-0.2
2,327,658	+		Echvi_1975	0.53	-0.8
2,327,658	+		Echvi_1975	0.53	+0.6
2,327,659	-		Echvi_1975	0.53	+0.7
2,327,659	-		Echvi_1975	0.53	+0.3
2,327,675	+		Echvi_1975	0.57	-0.1
2,327,715	-		Echvi_1975	0.67	-0.6
2,327,720	+		Echvi_1975	0.68	-2.1
2,327,765	-		Echvi_1975	0.80	-0.3
2,327,767	+		Echvi_1975	0.80	+1.3
2,327,811	-				-0.6
2,327,819	+				-0.6
2,327,838	+				-0.3
2,327,846	-				-0.6
2,327,847	+				+0.3
2,327,847	+				-0.6
2,327,847	+				-0.2
2,327,847	+				-0.2
2,327,847	+				-0.3
2,327,847	+				+1.2
2,327,850	+				+0.0
2,327,850	+				-0.8
2,327,860	+				-1.4
2,327,901	+		Echvi_1976	0.18	-2.1
2,327,937	+		Echvi_1976	0.29	-1.2
2,327,937	+		Echvi_1976	0.29	-1.1
2,327,938	-		Echvi_1976	0.29	-0.5
2,327,953	+		Echvi_1976	0.33	-1.7
2,327,955	+		Echvi_1976	0.34	+0.7
2,327,956	-		Echvi_1976	0.34	-2.4
2,327,992	-		Echvi_1976	0.45	-0.8
2,328,011	-		Echvi_1976	0.51	-0.6
2,328,061	+		Echvi_1976	0.66	-0.1
2,328,062	-		Echvi_1976	0.66	-0.2
2,328,062	-		Echvi_1976	0.66	+0.7
2,328,070	-		Echvi_1976	0.68	+0.0
2,328,070	-		Echvi_1976	0.68	-1.5
2,328,072	-		Echvi_1976	0.69	-0.3
2,328,151	+				+0.2
2,328,174	+				+0.9
2,328,180	-				+0.6
2,328,182	+				-0.6
2,328,183	-				-0.1
2,328,187	-				+0.4
2,328,232	+				+0.6
2,328,235	+				+0.1
2,328,259	-				+2.7
2,328,278	+				-0.2
2,328,278	+				+1.0
2,328,283	+				-1.4
2,328,393	-				+0.5
2,328,394	+				-2.0
2,328,394	+				-0.0
2,328,462	+		Echvi_1977	0.11	-0.3
2,328,468	+		Echvi_1977	0.12	-1.5
2,328,468	+		Echvi_1977	0.12	+0.3
2,328,468	+		Echvi_1977	0.12	-0.7
2,328,468	+		Echvi_1977	0.12	-0.2
2,328,468	+		Echvi_1977	0.12	-1.4
2,328,469	-		Echvi_1977	0.12	-0.5
2,328,469	-		Echvi_1977	0.12	+0.7
2,328,470	+		Echvi_1977	0.12	+1.7
2,328,470	+		Echvi_1977	0.12	+0.0
2,328,471	-		Echvi_1977	0.12	+0.4
2,328,471	-		Echvi_1977	0.12	-2.5
2,328,563	+		Echvi_1977	0.17	+0.4
2,328,563	+		Echvi_1977	0.17	-0.2
2,328,575	+				+1.1
2,328,575	+		Echvi_1977	0.17	+0.7
2,328,575	+		Echvi_1977	0.17	+0.2
2,328,593	+		Echvi_1977	0.18	-0.6
2,328,651	-		Echvi_1977	0.21	-0.4
2,328,700	-		Echvi_1977	0.23	+0.5
2,328,700	-		Echvi_1977	0.23	-1.8
2,328,700	-		Echvi_1977	0.23	-0.6
2,328,732	+		Echvi_1977	0.25	-0.3
2,328,733	-		Echvi_1977	0.25	-1.7
2,328,741	-		Echvi_1977	0.25	-0.8
2,328,741	-		Echvi_1977	0.25	-0.0
2,328,742	+		Echvi_1977	0.26	+0.5
2,328,773	+		Echvi_1977	0.27	+0.1
2,328,774	-		Echvi_1977	0.27	-0.4
2,328,793	-		Echvi_1977	0.28	+0.2
2,328,840	+		Echvi_1977	0.30	-0.5
2,328,896	+		Echvi_1977	0.33	-0.9
2,328,896	+		Echvi_1977	0.33	+0.0
2,328,897	-		Echvi_1977	0.33	-2.5
2,328,897	-		Echvi_1977	0.33	-0.7
2,328,898	+		Echvi_1977	0.33	+0.1
2,328,899	-		Echvi_1977	0.33	-0.1
2,328,988	-		Echvi_1977	0.38	-2.5
2,329,011	+		Echvi_1977	0.39	-0.4
2,329,011	+		Echvi_1977	0.39	+0.7
2,329,012	-		Echvi_1977	0.39	-0.3
2,329,012	-		Echvi_1977	0.39	+1.4
2,329,012	-		Echvi_1977	0.39	-0.0
2,329,015	+		Echvi_1977	0.39	+0.8
2,329,016	-		Echvi_1977	0.39	+0.3
2,329,018	+		Echvi_1977	0.39	+1.8
2,329,019	-		Echvi_1977	0.39	+0.2
2,329,019	-		Echvi_1977	0.39	+0.4
2,329,125	+		Echvi_1977	0.45	+0.4