Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2521 and EX28DRAFT_2522 are separated by 30 nucleotides EX28DRAFT_2522 and EX28DRAFT_2523 are separated by 112 nucleotides
EX28DRAFT_2521: EX28DRAFT_2521 - ABC-type multidrug transport system, ATPase and permease components, at 2,551,478 to 2,553,250
_2521
EX28DRAFT_2522: EX28DRAFT_2522 - Transcriptional regulators, at 2,553,281 to 2,553,739
_2522
EX28DRAFT_2523: EX28DRAFT_2523 - Cysteine synthase, at 2,553,852 to 2,554,901
_2523
Position (kb)
2553
2554 Strain fitness (log2 ratio)
-2
-1
0
1 at 2552.403 kb on + strand, within EX28DRAFT_2521 at 2552.403 kb on + strand, within EX28DRAFT_2521 at 2552.434 kb on + strand, within EX28DRAFT_2521 at 2552.435 kb on - strand, within EX28DRAFT_2521 at 2552.482 kb on + strand, within EX28DRAFT_2521 at 2552.482 kb on + strand, within EX28DRAFT_2521 at 2552.483 kb on - strand, within EX28DRAFT_2521 at 2552.483 kb on - strand, within EX28DRAFT_2521 at 2552.483 kb on - strand, within EX28DRAFT_2521 at 2552.483 kb on - strand, within EX28DRAFT_2521 at 2552.505 kb on + strand, within EX28DRAFT_2521 at 2552.505 kb on + strand, within EX28DRAFT_2521 at 2552.505 kb on + strand, within EX28DRAFT_2521 at 2552.506 kb on - strand, within EX28DRAFT_2521 at 2553.028 kb on - strand, within EX28DRAFT_2521 at 2553.028 kb on - strand, within EX28DRAFT_2521 at 2553.099 kb on + strand at 2553.100 kb on - strand at 2553.100 kb on - strand at 2553.100 kb on - strand at 2553.129 kb on + strand at 2553.172 kb on + strand at 2553.172 kb on + strand at 2553.173 kb on - strand at 2553.175 kb on + strand at 2553.175 kb on + strand at 2553.186 kb on - strand at 2553.230 kb on + strand at 2553.230 kb on + strand at 2553.230 kb on + strand at 2553.230 kb on + strand at 2553.231 kb on - strand at 2553.231 kb on - strand at 2553.289 kb on + strand at 2553.293 kb on + strand at 2553.433 kb on - strand, within EX28DRAFT_2522 at 2553.433 kb on - strand, within EX28DRAFT_2522 at 2553.531 kb on - strand, within EX28DRAFT_2522 at 2553.575 kb on + strand, within EX28DRAFT_2522 at 2553.575 kb on + strand, within EX28DRAFT_2522 at 2553.576 kb on - strand, within EX28DRAFT_2522 at 2553.689 kb on - strand, within EX28DRAFT_2522 at 2553.777 kb on - strand at 2553.825 kb on + strand at 2553.859 kb on + strand at 2553.860 kb on + strand at 2553.903 kb on + strand at 2553.970 kb on - strand, within EX28DRAFT_2523 at 2553.970 kb on - strand, within EX28DRAFT_2523 at 2554.050 kb on - strand, within EX28DRAFT_2523 at 2554.081 kb on + strand, within EX28DRAFT_2523 at 2554.081 kb on + strand, within EX28DRAFT_2523 at 2554.082 kb on - strand, within EX28DRAFT_2523 at 2554.082 kb on - strand, within EX28DRAFT_2523 at 2554.082 kb on - strand, within EX28DRAFT_2523 at 2554.119 kb on + strand, within EX28DRAFT_2523 at 2554.246 kb on - strand, within EX28DRAFT_2523 at 2554.287 kb on + strand, within EX28DRAFT_2523 at 2554.287 kb on + strand, within EX28DRAFT_2523 at 2554.289 kb on + strand, within EX28DRAFT_2523 at 2554.289 kb on + strand, within EX28DRAFT_2523 at 2554.290 kb on - strand, within EX28DRAFT_2523 at 2554.337 kb on + strand, within EX28DRAFT_2523 at 2554.356 kb on - strand, within EX28DRAFT_2523 at 2554.398 kb on + strand, within EX28DRAFT_2523 at 2554.399 kb on - strand, within EX28DRAFT_2523 at 2554.399 kb on - strand, within EX28DRAFT_2523 at 2554.399 kb on - strand, within EX28DRAFT_2523 at 2554.449 kb on + strand, within EX28DRAFT_2523 at 2554.449 kb on + strand, within EX28DRAFT_2523 at 2554.449 kb on + strand, within EX28DRAFT_2523 at 2554.449 kb on + strand, within EX28DRAFT_2523 at 2554.696 kb on + strand, within EX28DRAFT_2523 at 2554.697 kb on - strand, within EX28DRAFT_2523 at 2554.718 kb on + strand, within EX28DRAFT_2523 at 2554.719 kb on - strand, within EX28DRAFT_2523 at 2554.719 kb on - strand, within EX28DRAFT_2523 at 2554.719 kb on - strand, within EX28DRAFT_2523
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 2,552,403 + EX28DRAFT_2521 0.52 -0.0 2,552,403 + EX28DRAFT_2521 0.52 +0.4 2,552,434 + EX28DRAFT_2521 0.54 -0.1 2,552,435 - EX28DRAFT_2521 0.54 -0.2 2,552,482 + EX28DRAFT_2521 0.57 -0.3 2,552,482 + EX28DRAFT_2521 0.57 -0.8 2,552,483 - EX28DRAFT_2521 0.57 +0.1 2,552,483 - EX28DRAFT_2521 0.57 +0.0 2,552,483 - EX28DRAFT_2521 0.57 -0.7 2,552,483 - EX28DRAFT_2521 0.57 +1.4 2,552,505 + EX28DRAFT_2521 0.58 -0.4 2,552,505 + EX28DRAFT_2521 0.58 +0.1 2,552,505 + EX28DRAFT_2521 0.58 -0.8 2,552,506 - EX28DRAFT_2521 0.58 +0.2 2,553,028 - EX28DRAFT_2521 0.87 -1.8 2,553,028 - EX28DRAFT_2521 0.87 +1.5 2,553,099 + -0.9 2,553,100 - -0.5 2,553,100 - -0.1 2,553,100 - -0.0 2,553,129 + +0.8 2,553,172 + -0.0 2,553,172 + +0.8 2,553,173 - -0.1 2,553,175 + +0.2 2,553,175 + +0.3 2,553,186 - +0.5 2,553,230 + +0.1 2,553,230 + +0.4 2,553,230 + +0.2 2,553,230 + +0.1 2,553,231 - -0.0 2,553,231 - +0.6 2,553,289 + +0.3 2,553,293 + -1.4 2,553,433 - EX28DRAFT_2522 0.33 -0.4 2,553,433 - EX28DRAFT_2522 0.33 -0.4 2,553,531 - EX28DRAFT_2522 0.54 +1.2 2,553,575 + EX28DRAFT_2522 0.64 +0.2 2,553,575 + EX28DRAFT_2522 0.64 +0.8 2,553,576 - EX28DRAFT_2522 0.64 +0.2 2,553,689 - EX28DRAFT_2522 0.89 +0.2 2,553,777 - +1.1 2,553,825 + -0.3 2,553,859 + +0.2 2,553,860 + -0.4 2,553,903 + -0.1 2,553,970 - EX28DRAFT_2523 0.11 +0.4 2,553,970 - EX28DRAFT_2523 0.11 -0.9 2,554,050 - EX28DRAFT_2523 0.19 +0.5 2,554,081 + EX28DRAFT_2523 0.22 -0.3 2,554,081 + EX28DRAFT_2523 0.22 -0.4 2,554,082 - EX28DRAFT_2523 0.22 +0.4 2,554,082 - EX28DRAFT_2523 0.22 -0.0 2,554,082 - EX28DRAFT_2523 0.22 -0.3 2,554,119 + EX28DRAFT_2523 0.25 +0.1 2,554,246 - EX28DRAFT_2523 0.38 -0.4 2,554,287 + EX28DRAFT_2523 0.41 -0.3 2,554,287 + EX28DRAFT_2523 0.41 +0.3 2,554,289 + EX28DRAFT_2523 0.42 +0.2 2,554,289 + EX28DRAFT_2523 0.42 +0.4 2,554,290 - EX28DRAFT_2523 0.42 -0.9 2,554,337 + EX28DRAFT_2523 0.46 +0.6 2,554,356 - EX28DRAFT_2523 0.48 +0.2 2,554,398 + EX28DRAFT_2523 0.52 +0.1 2,554,399 - EX28DRAFT_2523 0.52 +0.4 2,554,399 - EX28DRAFT_2523 0.52 -0.2 2,554,399 - EX28DRAFT_2523 0.52 +0.6 2,554,449 + EX28DRAFT_2523 0.57 -0.4 2,554,449 + EX28DRAFT_2523 0.57 -0.5 2,554,449 + EX28DRAFT_2523 0.57 +0.9 2,554,449 + EX28DRAFT_2523 0.57 +0.6 2,554,696 + EX28DRAFT_2523 0.80 -1.1 2,554,697 - EX28DRAFT_2523 0.80 +0.7 2,554,718 + EX28DRAFT_2523 0.82 +0.8 2,554,719 - EX28DRAFT_2523 0.83 -0.1 2,554,719 - EX28DRAFT_2523 0.83 -0.6 2,554,719 - EX28DRAFT_2523 0.83 -0.0
Or see this region's nucleotide sequence