Experiment: L-Malic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS26725 and ABID97_RS26730 are separated by 24 nucleotides ABID97_RS26730 and ABID97_RS26735 are separated by 11 nucleotides ABID97_RS26735 and ABID97_RS26740 are separated by 37 nucleotides
ABID97_RS26725: ABID97_RS26725 - amidase, at 268,760 to 270,217
_RS26725
ABID97_RS26730: ABID97_RS26730 - TetR family transcriptional regulator C-terminal domain-containing protein, at 270,242 to 270,886
_RS26730
ABID97_RS26735: ABID97_RS26735 - enoyl-CoA hydratase, at 270,898 to 271,779
_RS26735
ABID97_RS26740: ABID97_RS26740 - CoA transferase, at 271,817 to 273,070
_RS26740
Position (kb) 270
271 Strain fitness (log2 ratio) -1
0
1 at 269.796 kb on - strand, within ABID97_RS26725 at 269.945 kb on + strand, within ABID97_RS26725 at 269.946 kb on - strand, within ABID97_RS26725 at 269.946 kb on - strand, within ABID97_RS26725 at 270.703 kb on - strand, within ABID97_RS26730 at 270.708 kb on + strand, within ABID97_RS26730 at 270.708 kb on + strand, within ABID97_RS26730 at 271.783 kb on + strand at 271.783 kb on + strand at 271.882 kb on - strand at 271.882 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Malic (C) remove 269,796 - ABID97_RS26725 0.71 +0.0 269,945 + ABID97_RS26725 0.81 -0.0 269,946 - ABID97_RS26725 0.81 +0.2 269,946 - ABID97_RS26725 0.81 -0.5 270,703 - ABID97_RS26730 0.71 -0.4 270,708 + ABID97_RS26730 0.72 -1.2 270,708 + ABID97_RS26730 0.72 -0.3 271,783 + -0.8 271,783 + +0.3 271,882 - -0.1 271,882 - -0.5
Or see this region's nucleotide sequence