Experiment: L-Malic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS22705 and ABID97_RS22710 overlap by 4 nucleotides ABID97_RS22710 and ABID97_RS22715 overlap by 1 nucleotides ABID97_RS22715 and ABID97_RS22720 are separated by 81 nucleotides
ABID97_RS22705: ABID97_RS22705 - ATPase, T2SS/T4P/T4SS family, at 4,703,673 to 4,705,469
_RS22705
ABID97_RS22710: ABID97_RS22710 - spermidine synthase, at 4,705,466 to 4,706,248
_RS22710
ABID97_RS22715: ABID97_RS22715 - DNA-deoxyinosine glycosylase, at 4,706,248 to 4,706,775
_RS22715
ABID97_RS22720: ABID97_RS22720 - hypothetical protein, at 4,706,857 to 4,707,249
_RS22720
Position (kb) 4705
4706
4707 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 4704.805 kb on + strand, within ABID97_RS22705 at 4704.806 kb on - strand, within ABID97_RS22705 at 4704.806 kb on - strand, within ABID97_RS22705 at 4704.806 kb on - strand, within ABID97_RS22705 at 4704.806 kb on - strand, within ABID97_RS22705 at 4704.973 kb on + strand, within ABID97_RS22705 at 4704.974 kb on - strand, within ABID97_RS22705 at 4705.133 kb on - strand, within ABID97_RS22705 at 4705.195 kb on + strand, within ABID97_RS22705 at 4705.196 kb on - strand, within ABID97_RS22705 at 4705.196 kb on - strand, within ABID97_RS22705 at 4705.196 kb on - strand, within ABID97_RS22705 at 4705.776 kb on + strand, within ABID97_RS22710 at 4705.777 kb on - strand, within ABID97_RS22710 at 4705.821 kb on + strand, within ABID97_RS22710 at 4705.821 kb on + strand, within ABID97_RS22710 at 4705.821 kb on + strand, within ABID97_RS22710 at 4705.821 kb on + strand, within ABID97_RS22710 at 4705.822 kb on - strand, within ABID97_RS22710 at 4706.112 kb on + strand, within ABID97_RS22710 at 4706.112 kb on + strand, within ABID97_RS22710 at 4706.113 kb on - strand, within ABID97_RS22710 at 4706.346 kb on - strand, within ABID97_RS22715 at 4706.507 kb on + strand, within ABID97_RS22715 at 4706.507 kb on + strand, within ABID97_RS22715 at 4706.507 kb on + strand, within ABID97_RS22715 at 4706.508 kb on - strand, within ABID97_RS22715 at 4706.508 kb on - strand, within ABID97_RS22715 at 4706.508 kb on - strand, within ABID97_RS22715 at 4706.508 kb on - strand, within ABID97_RS22715 at 4706.508 kb on - strand, within ABID97_RS22715 at 4706.561 kb on + strand, within ABID97_RS22715 at 4706.642 kb on + strand, within ABID97_RS22715 at 4706.642 kb on + strand, within ABID97_RS22715 at 4706.642 kb on + strand, within ABID97_RS22715 at 4706.642 kb on + strand, within ABID97_RS22715 at 4706.643 kb on - strand, within ABID97_RS22715 at 4706.643 kb on - strand, within ABID97_RS22715 at 4706.643 kb on - strand, within ABID97_RS22715 at 4706.643 kb on - strand, within ABID97_RS22715 at 4706.646 kb on - strand, within ABID97_RS22715 at 4706.646 kb on - strand, within ABID97_RS22715 at 4706.696 kb on - strand, within ABID97_RS22715 at 4706.786 kb on + strand at 4706.787 kb on - strand at 4706.858 kb on + strand at 4706.858 kb on + strand at 4706.859 kb on - strand at 4706.859 kb on - strand at 4706.859 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Malic (C) remove 4,704,805 + ABID97_RS22705 0.63 -1.2 4,704,806 - ABID97_RS22705 0.63 -1.8 4,704,806 - ABID97_RS22705 0.63 -1.4 4,704,806 - ABID97_RS22705 0.63 -1.6 4,704,806 - ABID97_RS22705 0.63 -2.0 4,704,973 + ABID97_RS22705 0.72 -4.7 4,704,974 - ABID97_RS22705 0.72 -1.7 4,705,133 - ABID97_RS22705 0.81 -1.4 4,705,195 + ABID97_RS22705 0.85 -1.3 4,705,196 - ABID97_RS22705 0.85 -1.7 4,705,196 - ABID97_RS22705 0.85 -1.3 4,705,196 - ABID97_RS22705 0.85 -0.7 4,705,776 + ABID97_RS22710 0.40 -0.0 4,705,777 - ABID97_RS22710 0.40 -0.8 4,705,821 + ABID97_RS22710 0.45 +0.0 4,705,821 + ABID97_RS22710 0.45 -0.1 4,705,821 + ABID97_RS22710 0.45 +0.2 4,705,821 + ABID97_RS22710 0.45 -1.2 4,705,822 - ABID97_RS22710 0.45 -0.7 4,706,112 + ABID97_RS22710 0.83 -0.4 4,706,112 + ABID97_RS22710 0.83 -0.5 4,706,113 - ABID97_RS22710 0.83 -0.2 4,706,346 - ABID97_RS22715 0.19 +0.5 4,706,507 + ABID97_RS22715 0.49 -0.4 4,706,507 + ABID97_RS22715 0.49 -0.4 4,706,507 + ABID97_RS22715 0.49 -0.6 4,706,508 - ABID97_RS22715 0.49 +0.2 4,706,508 - ABID97_RS22715 0.49 -0.3 4,706,508 - ABID97_RS22715 0.49 -0.3 4,706,508 - ABID97_RS22715 0.49 -0.5 4,706,508 - ABID97_RS22715 0.49 +0.4 4,706,561 + ABID97_RS22715 0.59 -0.2 4,706,642 + ABID97_RS22715 0.75 -0.2 4,706,642 + ABID97_RS22715 0.75 -0.3 4,706,642 + ABID97_RS22715 0.75 -0.3 4,706,642 + ABID97_RS22715 0.75 -0.1 4,706,643 - ABID97_RS22715 0.75 -0.2 4,706,643 - ABID97_RS22715 0.75 -0.6 4,706,643 - ABID97_RS22715 0.75 +0.0 4,706,643 - ABID97_RS22715 0.75 -0.4 4,706,646 - ABID97_RS22715 0.75 -0.2 4,706,646 - ABID97_RS22715 0.75 +0.3 4,706,696 - ABID97_RS22715 0.85 -0.5 4,706,786 + -0.4 4,706,787 - +0.1 4,706,858 + +0.1 4,706,858 + -1.0 4,706,859 - +0.5 4,706,859 - +0.2 4,706,859 - -0.2
Or see this region's nucleotide sequence