Experiment: L-Phenylalanine carbon 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFR28_04042 and PFR28_04043 are separated by 4 nucleotides PFR28_04043 and PFR28_04044 overlap by 4 nucleotides PFR28_04044 and PFR28_04045 are separated by 9 nucleotides
PFR28_04042: PFR28_04042 - hypothetical protein, at 4,615,198 to 4,615,893
_04042
PFR28_04043: PFR28_04043 - Indole-3-glycerol phosphate synthase, at 4,615,898 to 4,616,734
_04043
PFR28_04044: PFR28_04044 - Anthranilate phosphoribosyltransferase, at 4,616,731 to 4,617,780
_04044
PFR28_04045: PFR28_04045 - Anthranilate synthase component 2, at 4,617,790 to 4,618,383
_04045
Position (kb)
4616
4617
4618 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4616.756 kb on - strand at 4616.756 kb on - strand at 4616.756 kb on - strand at 4616.756 kb on - strand at 4616.764 kb on - strand at 4616.764 kb on - strand at 4616.764 kb on - strand at 4618.499 kb on - strand at 4618.499 kb on - strand at 4618.516 kb on - strand at 4618.543 kb on - strand at 4618.543 kb on - strand at 4618.632 kb on - strand at 4618.632 kb on - strand at 4618.647 kb on - strand at 4618.647 kb on - strand at 4618.652 kb on - strand at 4618.652 kb on - strand at 4618.671 kb on + strand at 4618.671 kb on + strand at 4618.671 kb on + strand at 4618.671 kb on + strand at 4618.672 kb on - strand at 4618.672 kb on - strand at 4618.672 kb on - strand at 4618.672 kb on - strand at 4618.672 kb on - strand at 4618.771 kb on + strand at 4618.771 kb on + strand at 4618.772 kb on - strand at 4618.772 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine carbon 5 mM remove 4,616,756 - -0.7 4,616,756 - -1.0 4,616,756 - +0.9 4,616,756 - -2.2 4,616,764 - +0.7 4,616,764 - -0.9 4,616,764 - -0.4 4,618,499 - -1.6 4,618,499 - -0.5 4,618,516 - +0.9 4,618,543 - -1.0 4,618,543 - +1.1 4,618,632 - -1.5 4,618,632 - +0.2 4,618,647 - +1.3 4,618,647 - +0.1 4,618,652 - -1.7 4,618,652 - +2.6 4,618,671 + +0.6 4,618,671 + +0.3 4,618,671 + +0.0 4,618,671 + -0.1 4,618,672 - -0.3 4,618,672 - +0.7 4,618,672 - +0.2 4,618,672 - -0.9 4,618,672 - +0.7 4,618,771 + +0.6 4,618,771 + +0.4 4,618,772 - +0.4 4,618,772 - -0.3
Or see this region's nucleotide sequence