Strain Fitness in Pseudomonas sp. RS175 around PFR28_03533

Experiment: L-Phenylalanine carbon 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Phenylalanine carbon 5 mM
4,080,789	+		PFR28_03532	0.29	-0.9
4,080,789	+		PFR28_03532	0.29	+0.5
4,080,789	+		PFR28_03532	0.29	-0.7
4,080,789	+		PFR28_03532	0.29	+0.3
4,080,789	+		PFR28_03532	0.29	+0.1
4,080,789	+		PFR28_03532	0.29	+0.4
4,080,789	+		PFR28_03532	0.29	+0.5
4,080,789	+		PFR28_03532	0.29	-0.3
4,080,789	+		PFR28_03532	0.29	-0.4
4,080,789	+		PFR28_03532	0.29	+1.0
4,080,789	+		PFR28_03532	0.29	-0.1
4,080,789	+		PFR28_03532	0.29	+1.2
4,080,789	+		PFR28_03532	0.29	-2.2
4,080,789	+		PFR28_03532	0.29	+0.5
4,080,789	+		PFR28_03532	0.29	+0.1
4,080,789	+		PFR28_03532	0.29	-1.8
4,080,789	+		PFR28_03532	0.29	-0.5
4,080,789	+		PFR28_03532	0.29	+1.1
4,080,789	+		PFR28_03532	0.29	-0.6
4,080,790	-		PFR28_03532	0.29	+1.1
4,080,790	-		PFR28_03532	0.29	-1.1
4,080,790	-		PFR28_03532	0.29	-1.3
4,080,790	-		PFR28_03532	0.29	-0.3
4,080,790	-		PFR28_03532	0.29	+0.3
4,080,790	-		PFR28_03532	0.29	-3.0
4,080,790	-		PFR28_03532	0.29	+0.4
4,080,790	-		PFR28_03532	0.29	-0.5
4,080,822	+		PFR28_03532	0.32	+0.2
4,080,822	+		PFR28_03532	0.32	-0.7
4,080,823	-		PFR28_03532	0.32	+1.7
4,080,855	+		PFR28_03532	0.35	+0.2
4,080,855	+		PFR28_03532	0.35	-1.8
4,080,855	+		PFR28_03532	0.35	+1.9
4,080,855	+		PFR28_03532	0.35	+0.1
4,080,855	+		PFR28_03532	0.35	-0.0
4,080,855	+		PFR28_03532	0.35	-2.0
4,080,855	+		PFR28_03532	0.35	+0.2
4,080,856	-		PFR28_03532	0.35	-0.6
4,080,856	-		PFR28_03532	0.35	+0.2
4,080,856	-		PFR28_03532	0.35	+0.4
4,080,856	-		PFR28_03532	0.35	-0.1
4,080,856	-		PFR28_03532	0.35	+0.1
4,080,856	-		PFR28_03532	0.35	+1.1
4,080,961	-		PFR28_03532	0.45	+0.6
4,081,688	+				+0.5
4,081,688	+				-2.1
4,081,688	+				+2.6
4,081,688	+				-0.3
4,081,689	-				-1.9
4,081,689	-				+0.6
4,081,689	-				+1.0
4,081,896	+		PFR28_03533	0.74	-2.4
4,081,896	+		PFR28_03533	0.74	+0.4
4,081,956	+				-1.6
4,081,956	+				-1.4
4,081,957	-				-0.5
4,081,957	-				+1.5
4,081,957	-				+2.4
4,081,959	+				+0.4
4,081,959	+				-0.9
4,081,970	+				+0.4
4,081,970	+				+0.5
4,081,970	+				-1.3
4,081,970	+				+0.6
4,081,970	+				-2.4
4,081,970	+				+0.5
4,081,970	+				-1.1
4,081,970	+				+0.7
4,081,970	+				-0.6
4,081,970	+				-0.9
4,081,971	-				+0.7
4,081,971	-				+0.4
4,081,971	-				+0.8
4,081,971	-				+2.0
4,081,971	-				+2.0
4,081,971	-				-2.1
4,081,971	-				-0.2
4,081,995	+				-0.9
4,081,996	-				+0.3
4,082,081	+				+0.9
4,082,081	+				-0.3
4,082,081	+				+0.5
4,082,081	+				+0.4
4,082,081	+				+0.0
4,082,081	+				+1.7
4,082,081	+				-0.6
4,082,081	+				+1.2
4,082,081	+				-0.3
4,082,081	+				-1.9
4,082,081	+				+1.7
4,082,081	+				-0.6
4,082,082	-				+0.5
4,082,082	-				+0.3
4,082,082	-				+1.8
4,082,082	-				+0.5
4,082,082	-				-0.3
4,082,082	-				+0.7
4,082,082	-				+2.2
4,082,082	-				-0.1
4,082,082	-				+0.9
4,082,082	-				+0.8
4,082,082	-				+1.2
4,082,082	-				+0.4
4,082,082	-				-3.5
4,082,082	-				-1.6
4,082,082	-				-0.2
4,082,082	-				+0.2
4,082,082	-				-1.8
4,082,082	-				+1.5
4,082,082	-				-0.3
4,082,134	-				+3.1
4,082,151	+				+1.0
4,082,151	+				-1.1
4,082,167	+				+0.1
4,082,168	-				-2.2
4,082,168	-				-0.9
4,082,168	-				-0.1
4,082,168	-				-0.9
4,082,187	-				-1.3
4,082,196	+				+0.7
4,082,196	+				+1.0
4,082,196	+				+0.3
4,082,196	+				+0.8
4,082,197	-				-0.1
4,082,197	-				+0.3
4,082,197	-				-0.3
4,082,197	-				-0.7
4,082,197	-				+0.9
4,082,197	-				+0.5
4,082,219	-				+1.4
4,082,219	-				-0.1
4,082,226	+				-1.0
4,082,226	+				-2.7
4,082,227	-				-1.8
4,082,227	-				+1.5
4,082,246	+				+1.8
4,082,246	+				-0.2
4,082,246	+				+0.7
4,082,246	+				+1.3
4,082,246	+				-0.6
4,082,246	+				+0.4
4,082,247	-				+0.1
4,082,247	-				-0.6
4,082,307	-				-3.0
4,082,499	+		PFR28_03534	0.13	+0.3
4,082,499	+		PFR28_03534	0.13	-0.8
4,082,499	+		PFR28_03534	0.13	+2.2
4,082,500	-		PFR28_03534	0.14	+0.5
4,082,500	-		PFR28_03534	0.14	-1.7
4,082,500	-		PFR28_03534	0.14	-1.6
4,082,500	-		PFR28_03534	0.14	-0.0
4,082,500	-		PFR28_03534	0.14	-1.1
4,082,580	+		PFR28_03534	0.21	-0.2
4,082,581	-		PFR28_03534	0.22	-0.5
4,082,716	-		PFR28_03534	0.35	+0.1
4,082,716	-		PFR28_03534	0.35	+1.1
4,082,716	-		PFR28_03534	0.35	+1.1
4,082,913	+		PFR28_03534	0.55	+1.7
4,082,914	-		PFR28_03534	0.55	-1.1
4,082,914	-		PFR28_03534	0.55	+0.6