Strain Fitness in Pseudomonas sp. RS175 around PFR28_03481

Experiment: L-Phenylalanine carbon 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Phenylalanine carbon 5 mM
4,012,364	+		PFR28_03479	0.47	+0.8
4,012,364	+		PFR28_03479	0.47	+2.2
4,012,364	+		PFR28_03479	0.47	+0.6
4,012,364	+		PFR28_03479	0.47	+0.4
4,012,364	+		PFR28_03479	0.47	+0.8
4,012,364	+		PFR28_03479	0.47	+2.8
4,012,364	+		PFR28_03479	0.47	-1.2
4,012,364	+		PFR28_03479	0.47	-0.3
4,012,364	+		PFR28_03479	0.47	+0.6
4,012,364	+		PFR28_03479	0.47	+0.6
4,012,364	+		PFR28_03479	0.47	+0.4
4,012,364	+		PFR28_03479	0.47	-1.2
4,012,364	+		PFR28_03479	0.47	+1.7
4,012,364	+		PFR28_03479	0.47	-0.2
4,012,364	+		PFR28_03479	0.47	-0.7
4,012,364	+		PFR28_03479	0.47	+0.7
4,012,364	+		PFR28_03479	0.47	+1.6
4,012,364	+		PFR28_03479	0.47	+0.2
4,012,364	+		PFR28_03479	0.47	-0.4
4,012,364	+		PFR28_03479	0.47	+0.7
4,012,364	+		PFR28_03479	0.47	+0.9
4,012,364	+		PFR28_03479	0.47	-0.5
4,012,364	+		PFR28_03479	0.47	-0.0
4,012,364	+		PFR28_03479	0.47	-0.4
4,012,364	+		PFR28_03479	0.47	-2.9
4,012,364	+		PFR28_03479	0.47	-0.9
4,012,364	+		PFR28_03479	0.47	-1.7
4,012,364	+		PFR28_03479	0.47	-0.9
4,012,364	+		PFR28_03479	0.47	+1.8
4,012,364	+		PFR28_03479	0.47	-1.0
4,012,364	+		PFR28_03479	0.47	-1.4
4,012,364	+		PFR28_03479	0.47	+0.0
4,012,364	+		PFR28_03479	0.47	+0.6
4,012,364	+		PFR28_03479	0.47	+0.9
4,012,364	+		PFR28_03479	0.47	-1.7
4,012,364	+		PFR28_03479	0.47	-0.6
4,012,364	+		PFR28_03479	0.47	-0.1
4,012,365	-		PFR28_03479	0.47	+0.1
4,012,365	-		PFR28_03479	0.47	-0.4
4,012,365	-		PFR28_03479	0.47	+0.4
4,012,365	-		PFR28_03479	0.47	-1.3
4,012,365	-		PFR28_03479	0.47	-1.3
4,012,365	-		PFR28_03479	0.47	-1.6
4,012,365	-		PFR28_03479	0.47	-1.3
4,012,365	-		PFR28_03479	0.47	-1.2
4,012,365	-		PFR28_03479	0.47	-1.1
4,012,365	-		PFR28_03479	0.47	+0.3
4,012,365	-		PFR28_03479	0.47	-1.1
4,012,365	-		PFR28_03479	0.47	-0.4
4,012,365	-		PFR28_03479	0.47	-3.2
4,012,365	-		PFR28_03479	0.47	+1.6
4,012,365	-		PFR28_03479	0.47	-1.4
4,012,365	-		PFR28_03479	0.47	+0.6
4,012,365	-		PFR28_03479	0.47	+0.5
4,012,365	-		PFR28_03479	0.47	-1.1
4,012,365	-		PFR28_03479	0.47	-1.3
4,012,365	-		PFR28_03479	0.47	-0.0
4,012,365	-		PFR28_03479	0.47	-1.9
4,012,365	-		PFR28_03479	0.47	+0.1
4,012,365	-		PFR28_03479	0.47	+1.4
4,012,365	-		PFR28_03479	0.47	-1.7
4,012,365	-		PFR28_03479	0.47	+1.6
4,012,365	-		PFR28_03479	0.47	+0.3
4,012,365	-		PFR28_03479	0.47	-0.0
4,012,365	-		PFR28_03479	0.47	+0.4
4,012,365	-		PFR28_03479	0.47	+0.7
4,012,365	-		PFR28_03479	0.47	+0.7
4,012,365	-		PFR28_03479	0.47	+1.0
4,012,365	-		PFR28_03479	0.47	-2.0
4,012,365	-		PFR28_03479	0.47	-1.8
4,012,365	-		PFR28_03479	0.47	-1.9
4,012,365	-		PFR28_03479	0.47	-1.2
4,012,365	-		PFR28_03479	0.47	-0.9
4,012,365	-		PFR28_03479	0.47	+0.4
4,012,365	-		PFR28_03479	0.47	-0.5
4,012,365	-		PFR28_03479	0.47	-1.8
4,012,365	-		PFR28_03479	0.47	+0.3
4,012,365	-		PFR28_03479	0.47	-0.1
4,012,365	-		PFR28_03479	0.47	-0.1
4,012,539	+		PFR28_03479	0.82	+0.2
4,012,539	+		PFR28_03479	0.82	+1.7
4,012,540	-		PFR28_03479	0.83	-0.4
4,012,540	-		PFR28_03479	0.83	+1.2
4,012,540	-		PFR28_03479	0.83	+0.5
4,012,540	-		PFR28_03479	0.83	+0.5
4,012,562	+		PFR28_03479	0.87	-1.0
4,012,562	+		PFR28_03479	0.87	-0.3
4,012,563	-		PFR28_03479	0.87	-0.0
4,012,690	+		PFR28_03480	0.10	+0.1
4,012,690	+		PFR28_03480	0.10	-1.0
4,012,691	-		PFR28_03480	0.11	+1.0
4,012,820	+		PFR28_03480	0.31	-0.1
4,012,870	+		PFR28_03480	0.39	+0.4
4,012,870	+		PFR28_03480	0.39	-0.4
4,012,870	+		PFR28_03480	0.39	-0.6
4,012,871	-		PFR28_03480	0.39	-0.5
4,012,871	-		PFR28_03480	0.39	-0.9
4,012,871	-		PFR28_03480	0.39	-0.3
4,012,871	-		PFR28_03480	0.39	-0.1
4,012,871	-		PFR28_03480	0.39	+1.7
4,012,871	-		PFR28_03480	0.39	+0.3
4,013,014	+		PFR28_03480	0.61	+1.7
4,013,014	+		PFR28_03480	0.61	-2.1
4,013,014	+		PFR28_03480	0.61	+1.2
4,013,015	-		PFR28_03480	0.61	-2.9
4,013,015	-		PFR28_03480	0.61	-1.1
4,013,044	+		PFR28_03480	0.66	+1.4
4,013,044	+		PFR28_03480	0.66	+1.2
4,013,044	+		PFR28_03480	0.66	+1.0
4,013,044	+		PFR28_03480	0.66	-1.3
4,013,044	+		PFR28_03480	0.66	+0.7
4,013,045	-		PFR28_03480	0.66	-0.8
4,013,045	-		PFR28_03480	0.66	+0.7
4,013,045	-		PFR28_03480	0.66	+0.1
4,013,045	-		PFR28_03480	0.66	+0.3
4,013,182	+		PFR28_03480	0.87	-0.9
4,013,183	-		PFR28_03480	0.88	-0.8
4,013,183	-		PFR28_03480	0.88	-0.4
4,013,183	-		PFR28_03480	0.88	+0.8
4,013,183	-		PFR28_03480	0.88	-0.3
4,013,447	+		PFR28_03481	0.40	-3.1
4,013,528	+		PFR28_03481	0.60	-0.3
4,013,528	+		PFR28_03481	0.60	-0.9
4,013,528	+		PFR28_03481	0.60	+1.2
4,013,528	+		PFR28_03481	0.60	-0.7
4,013,528	+		PFR28_03481	0.60	+2.0
4,013,528	+		PFR28_03481	0.60	-3.5
4,013,528	+		PFR28_03481	0.60	-0.3
4,013,529	-		PFR28_03481	0.60	-0.9
4,013,734	-				+2.1
4,013,817	+				+0.6
4,013,903	+				-0.5
4,013,903	+				-0.1
4,013,903	+				-0.4
4,013,903	+				-0.3
4,013,903	+				+0.9
4,013,904	-				+0.5
4,013,904	-				-0.8
4,013,904	-				-0.1
4,013,980	+				-0.9
4,014,169	+		PFR28_03482	0.19	-1.0
4,014,170	-		PFR28_03482	0.19	-1.7
4,014,214	+		PFR28_03482	0.22	+0.7
4,014,229	+		PFR28_03482	0.23	-0.5
4,014,229	+		PFR28_03482	0.23	+0.3
4,014,229	+		PFR28_03482	0.23	+0.3
4,014,230	-		PFR28_03482	0.23	-0.4
4,014,230	-		PFR28_03482	0.23	+1.3
4,014,230	-		PFR28_03482	0.23	-0.1
4,014,242	-		PFR28_03482	0.24	+1.4
4,014,242	-		PFR28_03482	0.24	+1.2
4,014,242	-		PFR28_03482	0.24	-0.0
4,014,242	-		PFR28_03482	0.24	+0.0
4,014,242	-		PFR28_03482	0.24	+0.3
4,014,559	+		PFR28_03482	0.47	-1.7
4,014,559	+		PFR28_03482	0.47	+0.3
4,014,559	+		PFR28_03482	0.47	-0.2
4,014,559	+		PFR28_03482	0.47	-3.7
4,014,559	+		PFR28_03482	0.47	-2.1
4,014,560	-		PFR28_03482	0.47	-0.3
4,014,560	-		PFR28_03482	0.47	-1.0
4,014,620	+		PFR28_03482	0.52	-1.6
4,014,621	-		PFR28_03482	0.52	+1.2
4,014,622	+		PFR28_03482	0.52	+0.4
4,014,622	+		PFR28_03482	0.52	-0.2
4,014,622	+		PFR28_03482	0.52	-0.2
4,014,623	-		PFR28_03482	0.52	-1.7
4,014,623	-		PFR28_03482	0.52	+0.1
4,014,623	-		PFR28_03482	0.52	-0.9
4,014,623	-		PFR28_03482	0.52	-0.2
4,014,623	-		PFR28_03482	0.52	-2.3
4,014,623	-		PFR28_03482	0.52	+1.0
4,014,623	-		PFR28_03482	0.52	-0.3
4,014,623	-		PFR28_03482	0.52	+0.3
4,014,623	-		PFR28_03482	0.52	+2.3
4,014,623	-		PFR28_03482	0.52	-2.3
4,014,623	-		PFR28_03482	0.52	+0.3