Strain Fitness in Pseudomonas sp. RS175 around PFR28_03463

Experiment: L-Phenylalanine carbon 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Phenylalanine carbon 5 mM
3,992,945	-		PFR28_03462	0.36	+0.5
3,993,172	-		PFR28_03462	0.53	-0.1
3,993,247	+		PFR28_03462	0.59	-1.9
3,993,248	-		PFR28_03462	0.59	-0.2
3,993,248	-		PFR28_03462	0.59	+0.9
3,993,248	-		PFR28_03462	0.59	-1.4
3,993,248	-		PFR28_03462	0.59	-0.3
3,993,586	+		PFR28_03462	0.84	-0.0
3,993,586	+		PFR28_03462	0.84	+1.1
3,993,587	-		PFR28_03462	0.84	-0.1
3,993,734	-				+0.4
3,993,734	-				+0.1
3,993,884	+				-0.5
3,993,988	+		PFR28_03463	0.21	-2.7
3,993,989	-		PFR28_03463	0.21	+0.2
3,994,052	+		PFR28_03463	0.40	+0.1
3,994,052	+		PFR28_03463	0.40	-1.7
3,994,053	-		PFR28_03463	0.41	+0.1
3,994,225	-				+0.1
3,994,395	+				+0.4
3,994,396	-				-1.5
3,994,411	+				+0.1
3,994,412	-				+0.7
3,994,420	+				-2.9
3,994,420	+				-0.5
3,994,420	+				-0.3
3,994,421	-				+1.8
3,994,435	-				-0.4
3,994,449	+				+0.1
3,994,449	+				+0.8
3,994,449	+				+0.5
3,994,450	-				+0.1
3,994,458	+				+0.9
3,994,458	+				-0.3
3,994,458	+				+0.6
3,994,458	+				-0.1
3,994,458	+				-2.7
3,994,458	+				+0.1
3,994,458	+				+0.6
3,994,459	-				+0.8
3,994,459	-				+0.8
3,994,459	-				+0.8
3,994,459	-				+0.9
3,994,459	-				+0.5
3,994,459	-				-0.3
3,994,459	-				-1.0
3,994,459	-				+1.1
3,994,459	-				-0.2
3,994,460	+				+0.9
3,994,460	+				+1.3
3,994,460	+				-0.3
3,994,460	+				-0.9
3,994,460	+				+2.0
3,994,460	+				-3.5
3,994,461	-				-3.2
3,994,461	-				+0.6
3,994,461	-				+0.1
3,994,461	-				+0.3
3,994,461	-				+1.5
3,994,536	+				-0.0
3,994,536	+				+0.6
3,994,587	+				+0.5
3,994,587	+				+0.1
3,994,587	+				-0.2
3,994,588	-				-1.7
3,994,598	+				-1.1
3,994,599	-				-0.5
3,994,599	-				-1.2
3,994,599	-				+1.3
3,994,646	-				-1.0
3,994,767	+		PFR28_03464	0.25	-1.3
3,994,767	+		PFR28_03464	0.25	+0.1
3,994,767	+		PFR28_03464	0.25	-2.0
3,994,767	+		PFR28_03464	0.25	+0.5
3,994,767	+		PFR28_03464	0.25	-0.5
3,994,767	+		PFR28_03464	0.25	+0.7
3,994,767	+		PFR28_03464	0.25	+0.7
3,994,767	+		PFR28_03464	0.25	-0.2
3,994,767	+		PFR28_03464	0.25	-0.0
3,994,767	+		PFR28_03464	0.25	-0.7
3,994,767	+		PFR28_03464	0.25	-0.5
3,994,767	+		PFR28_03464	0.25	-0.8
3,994,767	+		PFR28_03464	0.25	+0.9
3,994,768	-		PFR28_03464	0.25	-1.5
3,994,768	-		PFR28_03464	0.25	-1.5
3,994,768	-		PFR28_03464	0.25	+1.5
3,994,768	-		PFR28_03464	0.25	-0.1
3,994,768	-		PFR28_03464	0.25	+0.7
3,994,768	-		PFR28_03464	0.25	-1.4
3,994,768	-		PFR28_03464	0.25	-0.8
3,994,768	-		PFR28_03464	0.25	-0.7
3,994,768	-		PFR28_03464	0.25	-2.0
3,994,768	-		PFR28_03464	0.25	-0.5
3,994,768	-		PFR28_03464	0.25	+0.6
3,994,768	-		PFR28_03464	0.25	-1.7
3,994,854	-		PFR28_03464	0.37	-0.4
3,994,907	-		PFR28_03464	0.44	-3.7
3,994,910	+		PFR28_03464	0.44	-0.6
3,994,910	+		PFR28_03464	0.44	-0.2
3,994,911	-		PFR28_03464	0.44	+1.5
3,994,911	-		PFR28_03464	0.44	+1.3
3,994,911	-		PFR28_03464	0.44	+0.5
3,994,911	-		PFR28_03464	0.44	-0.4
3,994,911	-		PFR28_03464	0.44	-2.1
3,994,957	-		PFR28_03464	0.50	+0.0
3,994,957	-		PFR28_03464	0.50	-0.0
3,995,056	+		PFR28_03464	0.63	-1.2
3,995,056	+		PFR28_03464	0.63	+0.5