Strain Fitness in Pseudomonas sp. RS175 around PFR28_03420

Experiment: L-Phenylalanine carbon 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Phenylalanine carbon 5 mM
3,927,162	+				+0.1
3,927,162	+				-1.2
3,927,162	+				+1.1
3,927,162	+				-2.9
3,927,162	+				-0.6
3,927,162	+				+1.2
3,927,162	+				+1.4
3,927,163	-				+1.2
3,927,172	+				-2.2
3,927,172	+				-0.6
3,927,172	+				+1.1
3,927,173	-				-0.5
3,927,296	+				-0.1
3,927,518	+		PFR28_03419	0.47	+1.1
3,927,518	+		PFR28_03419	0.47	+0.2
3,927,518	+		PFR28_03419	0.47	-0.9
3,927,519	-		PFR28_03419	0.47	-0.6
3,927,519	-		PFR28_03419	0.47	+0.3
3,927,519	-		PFR28_03419	0.47	-0.1
3,927,519	-		PFR28_03419	0.47	+2.6
3,927,519	-		PFR28_03419	0.47	+1.9
3,927,527	+		PFR28_03419	0.49	+0.6
3,927,528	-		PFR28_03419	0.49	+0.0
3,927,528	-		PFR28_03419	0.49	-2.1
3,927,602	+		PFR28_03419	0.65	+0.6
3,927,602	+		PFR28_03419	0.65	+0.3
3,927,602	+		PFR28_03419	0.65	-0.5
3,927,602	+		PFR28_03419	0.65	+0.1
3,927,602	+		PFR28_03419	0.65	-2.7
3,927,602	+		PFR28_03419	0.65	-0.1
3,927,602	+		PFR28_03419	0.65	+1.1
3,927,602	+		PFR28_03419	0.65	+0.9
3,927,603	-		PFR28_03419	0.65	-1.2
3,927,603	-		PFR28_03419	0.65	+0.1
3,927,603	-		PFR28_03419	0.65	+1.4
3,927,603	-		PFR28_03419	0.65	-1.3
3,927,603	-		PFR28_03419	0.65	-0.6
3,927,603	-		PFR28_03419	0.65	+0.1
3,927,603	-		PFR28_03419	0.65	-0.4
3,927,680	+		PFR28_03419	0.81	-0.7
3,927,680	+		PFR28_03419	0.81	-1.2
3,927,681	-		PFR28_03419	0.81	+0.9
3,927,681	-		PFR28_03419	0.81	-0.0
3,927,681	-		PFR28_03419	0.81	+1.2
3,927,681	-		PFR28_03419	0.81	-1.1
3,927,689	+		PFR28_03419	0.83	+1.7
3,927,689	+		PFR28_03419	0.83	+0.5
3,927,689	+		PFR28_03419	0.83	-3.6
3,927,689	+		PFR28_03419	0.83	-0.9
3,927,689	+		PFR28_03419	0.83	-0.1
3,927,689	+		PFR28_03419	0.83	+0.0
3,927,689	+		PFR28_03419	0.83	+1.0
3,927,689	+		PFR28_03419	0.83	+0.2
3,927,689	+		PFR28_03419	0.83	+0.6
3,927,689	+		PFR28_03419	0.83	+0.9
3,927,689	+		PFR28_03419	0.83	-3.4
3,927,689	+		PFR28_03419	0.83	+0.1
3,927,689	+		PFR28_03419	0.83	+0.5
3,927,689	+		PFR28_03419	0.83	-1.5
3,927,689	+		PFR28_03419	0.83	-0.1
3,927,689	+		PFR28_03419	0.83	+0.6
3,927,689	+		PFR28_03419	0.83	-0.5
3,927,689	+		PFR28_03419	0.83	+0.9
3,927,689	+		PFR28_03419	0.83	-0.2
3,927,689	+		PFR28_03419	0.83	+0.6
3,927,689	+		PFR28_03419	0.83	-1.4
3,927,689	+		PFR28_03419	0.83	+1.2
3,927,689	+		PFR28_03419	0.83	-3.3
3,927,689	+		PFR28_03419	0.83	-0.0
3,927,689	+		PFR28_03419	0.83	-0.9
3,927,689	+		PFR28_03419	0.83	-2.6
3,927,689	+		PFR28_03419	0.83	-0.0
3,927,689	+		PFR28_03419	0.83	+0.4
3,927,689	+		PFR28_03419	0.83	-0.5
3,927,690	-		PFR28_03419	0.83	+1.2
3,927,690	-		PFR28_03419	0.83	+0.6
3,927,690	-		PFR28_03419	0.83	+0.4
3,927,690	-		PFR28_03419	0.83	-0.2
3,927,690	-		PFR28_03419	0.83	+0.7
3,927,690	-		PFR28_03419	0.83	+0.1
3,927,690	-		PFR28_03419	0.83	-0.1
3,927,690	-		PFR28_03419	0.83	+0.1
3,927,690	-		PFR28_03419	0.83	+1.1
3,927,690	-		PFR28_03419	0.83	+0.4
3,927,690	-		PFR28_03419	0.83	+0.7
3,927,690	-		PFR28_03419	0.83	+0.6
3,927,690	-		PFR28_03419	0.83	-1.1
3,927,690	-		PFR28_03419	0.83	+1.4
3,927,690	-		PFR28_03419	0.83	+0.5
3,927,690	-		PFR28_03419	0.83	+1.7
3,927,690	-		PFR28_03419	0.83	+2.2
3,927,690	-		PFR28_03419	0.83	+1.0
3,927,690	-		PFR28_03419	0.83	-3.5
3,927,690	-		PFR28_03419	0.83	-0.2
3,927,690	-		PFR28_03419	0.83	-1.1
3,927,690	-		PFR28_03419	0.83	+1.6
3,927,690	-		PFR28_03419	0.83	-0.3
3,927,690	-		PFR28_03419	0.83	+0.8
3,927,690	-		PFR28_03419	0.83	+0.5
3,927,757	-				-1.8
3,927,757	-				-0.3
3,927,760	+				-1.5
3,927,760	+				-1.1
3,927,760	+				+0.7
3,927,760	+				+3.2
3,927,760	+				-0.5
3,927,760	+				+0.7
3,927,760	+				-1.3
3,927,760	+				+2.2
3,927,760	+				-0.4
3,927,760	+				-1.8
3,927,760	+				+0.0
3,927,760	+				+2.4
3,927,760	+				-0.1
3,927,760	+				-0.1
3,927,760	+				+0.3
3,927,761	-				+1.1
3,927,761	-				+1.0
3,927,761	-				-0.5
3,927,761	-				+0.2
3,927,761	-				-2.8
3,927,761	-				-1.3
3,927,761	-				-1.2
3,927,761	-				-0.5
3,927,761	-				+0.4
3,927,761	-				-0.0
3,927,761	-				-0.1
3,927,761	-				-1.5
3,927,761	-				-0.1
3,927,761	-				+1.1
3,927,761	-				-2.5
3,927,761	-				+0.8
3,927,761	-				-0.7
3,927,761	-				+1.1
3,927,761	-				-0.5
3,927,761	-				+0.6
3,927,761	-				-0.7
3,927,761	-				+0.2
3,927,761	-				-0.6
3,927,761	-				-1.0
3,927,761	-				+0.1
3,927,761	-				-1.1
3,927,761	-				-1.2
3,927,818	+				-2.5
3,927,829	-				+0.3
3,927,829	-				-0.1
3,927,999	+				-0.6
3,927,999	+				-2.5
3,927,999	+				-1.4
3,927,999	+				+0.5
3,927,999	+				-0.9
3,928,003	+				-0.3
3,928,003	+				+0.4
3,928,003	+				-0.4
3,928,003	+				+0.2
3,928,003	+				-0.7
3,928,003	+				-1.9
3,928,004	-				+1.1
3,928,004	-				+0.4
3,928,004	-				-0.4
3,928,025	-				+2.2
3,928,025	-				-3.4
3,928,025	-				-1.2
3,928,044	+				+0.7
3,928,045	-				+1.0
3,928,058	+				-3.9
3,928,058	+				-3.1
3,928,058	+				+1.5
3,928,059	-				-2.3
3,928,059	-				-0.7
3,928,059	-				-0.9
3,928,059	-				-1.2
3,928,127	+				-1.8
3,928,206	-				+1.6
3,928,230	+		PFR28_03420	0.14	-1.2
3,928,230	+		PFR28_03420	0.14	-1.2
3,928,231	-		PFR28_03420	0.14	-1.8
3,928,231	-		PFR28_03420	0.14	-2.2
3,928,231	-		PFR28_03420	0.14	-1.3
3,928,255	-		PFR28_03420	0.18	+0.2
3,928,255	-		PFR28_03420	0.18	-1.2
3,928,305	+		PFR28_03420	0.26	+0.4
3,928,488	+		PFR28_03420	0.56	-1.1
3,928,488	+		PFR28_03420	0.56	-2.8
3,928,527	+		PFR28_03420	0.63	-1.4
3,928,527	+		PFR28_03420	0.63	+1.2
3,928,527	+		PFR28_03420	0.63	-2.3
3,928,528	-		PFR28_03420	0.63	-1.5
3,928,528	-		PFR28_03420	0.63	-2.6
3,928,528	-		PFR28_03420	0.63	+0.6
3,928,528	-		PFR28_03420	0.63	-0.5
3,928,616	+		PFR28_03420	0.77	+0.2
3,928,616	+		PFR28_03420	0.77	+1.0
3,928,617	-		PFR28_03420	0.77	+1.9
3,928,617	-		PFR28_03420	0.77	-2.4
3,928,660	+		PFR28_03420	0.84	+0.3
3,928,660	+		PFR28_03420	0.84	+1.2
3,928,823	+				+1.0
3,928,823	+				-0.3
3,928,823	+				+0.6
3,928,824	-				+0.3
3,928,829	+				+0.8
3,928,830	-				-0.7
3,929,046	+				+0.8
3,929,091	+		PFR28_03422	0.13	-0.7
3,929,092	-		PFR28_03422	0.13	-1.9
3,929,092	-		PFR28_03422	0.13	-2.5
3,929,098	+		PFR28_03422	0.15	-0.6
3,929,098	+		PFR28_03422	0.15	+0.8
3,929,098	+		PFR28_03422	0.15	-0.2
3,929,098	+		PFR28_03422	0.15	+0.2
3,929,099	-		PFR28_03422	0.15	-0.5
3,929,099	-		PFR28_03422	0.15	+0.9
3,929,099	-		PFR28_03422	0.15	-0.4
3,929,099	-		PFR28_03422	0.15	-0.9
3,929,099	-		PFR28_03422	0.15	+1.1
3,929,112	+		PFR28_03422	0.18	+0.9
3,929,112	+		PFR28_03422	0.18	+1.1
3,929,113	-		PFR28_03422	0.18	+0.2
3,929,113	-		PFR28_03422	0.18	+1.0
3,929,113	-		PFR28_03422	0.18	+0.2
3,929,113	-		PFR28_03422	0.18	-1.6
3,929,113	-		PFR28_03422	0.18	-0.7
3,929,114	+		PFR28_03422	0.19	-0.5
3,929,114	+		PFR28_03422	0.19	-1.4
3,929,114	+		PFR28_03422	0.19	-1.2
3,929,115	-		PFR28_03422	0.19	+0.6
3,929,115	-		PFR28_03422	0.19	-0.3
3,929,115	-		PFR28_03422	0.19	+1.1
3,929,115	-		PFR28_03422	0.19	-2.7
3,929,190	+		PFR28_03422	0.36	-0.8
3,929,190	+		PFR28_03422	0.36	+1.6
3,929,190	+		PFR28_03422	0.36	-0.3
3,929,190	+		PFR28_03422	0.36	+0.2
3,929,190	+		PFR28_03422	0.36	+2.4
3,929,190	+		PFR28_03422	0.36	-0.5
3,929,190	+		PFR28_03422	0.36	-0.2
3,929,190	+		PFR28_03422	0.36	-1.4
3,929,190	+		PFR28_03422	0.36	-0.9
3,929,190	+		PFR28_03422	0.36	+1.0
3,929,190	+		PFR28_03422	0.36	-0.2
3,929,190	+		PFR28_03422	0.36	+1.1
3,929,190	+		PFR28_03422	0.36	-1.8
3,929,190	+		PFR28_03422	0.36	+3.3
3,929,190	+		PFR28_03422	0.36	-0.4
3,929,190	+		PFR28_03422	0.36	-1.6
3,929,190	+		PFR28_03422	0.36	+0.9
3,929,190	+		PFR28_03422	0.36	-1.0
3,929,191	-		PFR28_03422	0.37	-1.8
3,929,191	-		PFR28_03422	0.37	-0.5
3,929,191	-		PFR28_03422	0.37	-2.4
3,929,191	-		PFR28_03422	0.37	-1.7
3,929,191	-		PFR28_03422	0.37	-0.9
3,929,191	-		PFR28_03422	0.37	-1.5
3,929,191	-		PFR28_03422	0.37	+2.1
3,929,191	-		PFR28_03422	0.37	-0.9
3,929,191	-		PFR28_03422	0.37	+1.0
3,929,191	-		PFR28_03422	0.37	+1.8
3,929,334	+		PFR28_03422	0.70	+0.9
3,929,334	+		PFR28_03422	0.70	+0.8
3,929,369	+		PFR28_03422	0.78	-2.4
3,929,370	-		PFR28_03422	0.79	-0.1
3,929,370	-		PFR28_03422	0.79	-0.4
3,929,449	+				-2.8
3,929,449	+				-3.3
3,929,449	+				-0.3
3,929,466	+				+0.3
3,929,467	-				+0.4
3,929,525	+				-0.2
3,929,525	+				+0.6
3,929,525	+				-0.5
3,929,525	+				-1.9
3,929,526	-				-0.2
3,929,526	-				+1.2
3,929,526	-				-0.1
3,929,526	-				-0.7
3,929,538	+				+0.0
3,929,538	+				+0.4
3,929,538	+				+0.7
3,929,538	+				-1.6
3,929,539	-				-0.6
3,929,539	-				-0.1
3,929,576	+				-1.0
3,929,576	+				-2.4
3,929,576	+				+0.7
3,929,576	+				-0.9
3,929,576	+				+0.1
3,929,576	+				+0.6
3,929,576	+				+0.3
3,929,576	+				-0.1
3,929,576	+				-0.9
3,929,576	+				-2.4
3,929,576	+				-0.3
3,929,576	+				-2.0
3,929,576	+				-1.0
3,929,576	+				-2.1
3,929,577	-				-1.5
3,929,577	-				-2.0
3,929,577	-				+1.0
3,929,577	-				+1.4
3,929,577	-				+0.1
3,929,577	-				+2.1
3,929,577	-				-1.7
3,929,577	-				+1.3
3,929,577	-				+1.7
3,929,577	-				+0.3
3,929,577	-				+2.6
3,929,577	-				-0.9
3,929,694	-				-0.3
3,929,751	+				+0.6