Strain Fitness in Pseudomonas sp. RS175 around PFR28_03274

Experiment: L-Phenylalanine carbon 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Phenylalanine carbon 5 mM
3,780,564	-		PFR28_03273	0.41	-0.6
3,780,567	-		PFR28_03273	0.42	+0.2
3,780,567	-		PFR28_03273	0.42	-1.0
3,780,567	-		PFR28_03273	0.42	-0.9
3,780,567	-		PFR28_03273	0.42	+0.4
3,780,567	-		PFR28_03273	0.42	-0.2
3,780,567	-		PFR28_03273	0.42	+1.2
3,780,567	-		PFR28_03273	0.42	+0.6
3,781,356	-				-1.2
3,781,356	-				-0.1
3,781,382	-				-0.7
3,781,382	-				+0.8
3,781,382	-				-1.4
3,781,386	-				-0.1
3,781,396	-				+0.6
3,781,396	-				-0.5
3,784,079	-				-1.5
3,784,081	-				+0.7
3,784,081	-				-0.3
3,784,081	-				+0.2
3,784,112	-				-2.4
3,784,112	-				+0.5
3,784,132	+				-1.0
3,784,132	+				+0.2
3,784,133	-				-0.4
3,784,133	-				-0.0
3,784,133	-				+0.6
3,784,311	+		PFR28_03275	0.16	+0.3
3,784,311	+		PFR28_03275	0.16	+1.3
3,784,311	+		PFR28_03275	0.16	+1.1
3,784,311	+		PFR28_03275	0.16	+0.7
3,784,312	-		PFR28_03275	0.16	+1.0
3,784,312	-		PFR28_03275	0.16	+1.0
3,784,312	-		PFR28_03275	0.16	+1.6
3,784,312	-		PFR28_03275	0.16	+0.4
3,784,312	-		PFR28_03275	0.16	-0.1
3,784,312	-		PFR28_03275	0.16	+2.1
3,784,312	-		PFR28_03275	0.16	+0.7
3,784,429	-		PFR28_03275	0.28	-0.2
3,784,429	-		PFR28_03275	0.28	+1.3
3,784,429	-		PFR28_03275	0.28	-1.0
3,784,587	+		PFR28_03275	0.44	-1.0
3,784,587	+		PFR28_03275	0.44	+0.1
3,784,588	-		PFR28_03275	0.44	+0.6
3,784,636	-		PFR28_03275	0.49	-0.1
3,784,636	-		PFR28_03275	0.49	-0.3
3,784,636	-		PFR28_03275	0.49	-0.4
3,784,704	+		PFR28_03275	0.55	+0.7
3,784,704	+		PFR28_03275	0.55	-0.2
3,784,887	+		PFR28_03275	0.74	+0.5
3,784,887	+		PFR28_03275	0.74	-0.3
3,784,887	+		PFR28_03275	0.74	-0.5
3,784,887	+		PFR28_03275	0.74	-0.4
3,784,887	+		PFR28_03275	0.74	-0.4
3,784,887	+		PFR28_03275	0.74	+0.9
3,784,887	+		PFR28_03275	0.74	-0.7
3,784,888	-		PFR28_03275	0.74	-0.3
3,784,888	-		PFR28_03275	0.74	-0.2
3,784,888	-		PFR28_03275	0.74	+1.7
3,784,888	-		PFR28_03275	0.74	-1.9
3,784,888	-		PFR28_03275	0.74	+0.9
3,784,891	+		PFR28_03275	0.74	+0.7
3,784,891	+		PFR28_03275	0.74	-0.7
3,784,891	+		PFR28_03275	0.74	+0.7
3,784,891	+		PFR28_03275	0.74	-1.9
3,784,891	+		PFR28_03275	0.74	-0.4
3,784,891	+		PFR28_03275	0.74	-0.8
3,784,891	+		PFR28_03275	0.74	-0.4
3,784,891	+		PFR28_03275	0.74	+1.5
3,784,891	+		PFR28_03275	0.74	+0.3
3,784,892	-		PFR28_03275	0.74	-0.8
3,784,892	-		PFR28_03275	0.74	+0.4
3,784,892	-		PFR28_03275	0.74	+1.1
3,784,892	-		PFR28_03275	0.74	-0.4
3,784,892	-		PFR28_03275	0.74	+0.1
3,784,892	-		PFR28_03275	0.74	+0.5
3,784,892	-		PFR28_03275	0.74	+1.1
3,784,892	-		PFR28_03275	0.74	-2.5
3,784,892	-		PFR28_03275	0.74	-0.1
3,784,892	-		PFR28_03275	0.74	+0.8
3,784,892	-		PFR28_03275	0.74	+1.0
3,784,893	+		PFR28_03275	0.74	-0.2
3,784,893	+		PFR28_03275	0.74	+0.6
3,784,893	+		PFR28_03275	0.74	-0.6
3,784,893	+		PFR28_03275	0.74	+0.7
3,784,893	+		PFR28_03275	0.74	+1.9
3,784,893	+		PFR28_03275	0.74	-0.1
3,784,893	+		PFR28_03275	0.74	+0.1
3,784,893	+		PFR28_03275	0.74	-0.3
3,784,893	+		PFR28_03275	0.74	+1.9
3,784,894	-		PFR28_03275	0.74	+0.9
3,784,894	-		PFR28_03275	0.74	-1.4
3,784,894	-		PFR28_03275	0.74	-0.9
3,784,894	-		PFR28_03275	0.74	+1.3
3,784,897	+		PFR28_03275	0.75	-1.4
3,784,897	+		PFR28_03275	0.75	+0.3
3,784,897	+		PFR28_03275	0.75	+1.2
3,784,897	+		PFR28_03275	0.75	+0.2
3,784,897	+		PFR28_03275	0.75	-0.4
3,784,898	-		PFR28_03275	0.75	-0.4
3,784,898	-		PFR28_03275	0.75	+0.1
3,784,898	-		PFR28_03275	0.75	+0.4
3,784,920	+		PFR28_03275	0.77	-2.1
3,784,920	+		PFR28_03275	0.77	+1.7
3,784,920	+		PFR28_03275	0.77	-0.1
3,784,920	+		PFR28_03275	0.77	+0.2
3,784,920	+		PFR28_03275	0.77	-0.7
3,784,921	-		PFR28_03275	0.77	+0.2
3,784,921	-		PFR28_03275	0.77	-2.5
3,784,921	-		PFR28_03275	0.77	+0.3
3,784,921	-		PFR28_03275	0.77	-0.4
3,784,921	-		PFR28_03275	0.77	-1.4
3,784,921	-		PFR28_03275	0.77	-0.4