Strain Fitness in Pseudomonas sp. RS175 around PFR28_02525

Experiment: L-Phenylalanine carbon 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Phenylalanine carbon 5 mM
2,999,265	+		PFR28_02524	0.12	-0.6
2,999,265	+		PFR28_02524	0.12	+1.0
2,999,266	-		PFR28_02524	0.12	+0.8
2,999,266	-		PFR28_02524	0.12	-0.2
2,999,266	-		PFR28_02524	0.12	+0.6
2,999,266	-		PFR28_02524	0.12	+0.3
2,999,540	-		PFR28_02524	0.43	+0.4
2,999,540	-		PFR28_02524	0.43	-1.2
2,999,540	-		PFR28_02524	0.43	+0.8
2,999,856	+		PFR28_02524	0.78	-0.4
2,999,898	+		PFR28_02524	0.83	-1.1
2,999,944	-		PFR28_02524	0.88	+0.7
3,000,114	-				-0.8
3,000,183	-				+1.1
3,000,388	+		PFR28_02525	0.22	-0.7
3,000,389	-		PFR28_02525	0.22	-0.1
3,000,389	-		PFR28_02525	0.22	-0.6
3,000,542	+		PFR28_02525	0.40	-1.5
3,000,542	+		PFR28_02525	0.40	-3.6
3,000,542	+		PFR28_02525	0.40	-0.7
3,000,543	-		PFR28_02525	0.40	+1.8
3,000,544	+		PFR28_02525	0.40	-1.1
3,000,811	+		PFR28_02525	0.71	-0.3
3,000,923	+		PFR28_02525	0.83	-1.0
3,000,924	-		PFR28_02525	0.84	-0.9
3,001,028	+				-0.9
3,001,028	+				+0.4
3,001,028	+				+0.2
3,001,028	+				+1.1
3,001,028	+				+1.4
3,001,028	+				-1.3
3,001,028	+				-0.6
3,001,028	+				+0.1
3,001,029	-				+0.7
3,001,029	-				-0.1
3,001,029	-				-1.7
3,001,029	-				-0.4
3,001,127	+				+0.4
3,001,127	+				-0.2
3,001,127	+				+0.4
3,001,128	-				+0.9
3,001,128	-				-0.2
3,001,128	-				-1.5
3,001,128	-				-0.1
3,001,138	-				-0.2
3,001,138	-				+1.5
3,001,203	+				-0.0
3,001,204	-				+0.5
3,001,216	+				-0.5
3,001,217	-				+0.0
3,001,217	-				+0.2
3,001,217	-				+1.2
3,001,217	-				-0.2
3,001,217	-				+0.1
3,001,217	-				+0.5
3,001,235	-				+0.3
3,001,244	+				-1.5
3,001,244	+				-2.5
3,001,244	+				+0.4
3,001,244	+				-0.8
3,001,245	-				+0.6
3,001,245	-				-0.1
3,001,245	-				-0.7
3,001,245	-				-1.5
3,001,267	+				+0.3
3,001,331	-				+0.2
3,001,337	+				-0.5
3,001,337	+				+0.0
3,001,337	+				+0.2
3,001,337	+				-0.6
3,001,369	+				-0.4
3,001,369	+				-1.4
3,001,369	+				-0.9
3,001,370	-				+0.9
3,001,464	+		PFR28_02526	0.22	-2.0
3,001,501	+		PFR28_02526	0.28	+0.6
3,001,501	+		PFR28_02526	0.28	-1.3
3,001,502	-		PFR28_02526	0.28	-0.9
3,001,502	-		PFR28_02526	0.28	+1.0
3,001,670	+		PFR28_02526	0.54	+0.2
3,001,670	+		PFR28_02526	0.54	-3.9
3,001,670	+		PFR28_02526	0.54	+0.6
3,001,671	-		PFR28_02526	0.55	-2.4
3,001,717	+		PFR28_02526	0.62	-0.4
3,001,717	+		PFR28_02526	0.62	+0.7
3,001,717	+		PFR28_02526	0.62	-1.0
3,001,717	+		PFR28_02526	0.62	-2.7
3,001,718	-		PFR28_02526	0.62	-0.1
3,001,718	-		PFR28_02526	0.62	+0.4
3,001,841	-		PFR28_02526	0.81	-0.7
3,001,897	+				-0.2
3,001,898	-				+0.0
3,001,930	+				-0.8
3,001,930	+				+1.5
3,001,930	+				+0.5
3,001,931	-				-0.4
3,001,977	+				-0.7
3,002,049	+		PFR28_02527	0.11	+0.5
3,002,049	+		PFR28_02527	0.11	+0.2