Strain Fitness in Pseudomonas sp. RS175 around PFR28_02510

Experiment: L-Phenylalanine carbon 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Phenylalanine carbon 5 mM
2,982,600	+		PFR28_02509	0.21	+0.4
2,982,600	+		PFR28_02509	0.21	-0.2
2,982,600	+		PFR28_02509	0.21	-0.2
2,982,601	-		PFR28_02509	0.21	-1.6
2,982,601	-		PFR28_02509	0.21	+1.1
2,982,601	-		PFR28_02509	0.21	-4.1
2,982,601	-		PFR28_02509	0.21	-1.0
2,982,820	-		PFR28_02509	0.40	-1.7
2,982,820	-		PFR28_02509	0.40	-1.1
2,982,872	-		PFR28_02509	0.45	-0.6
2,983,078	-		PFR28_02509	0.63	+0.7
2,983,426	+				-1.4
2,983,426	+				-0.4
2,983,426	+				+0.3
2,983,426	+				-1.3
2,983,427	-				+0.8
2,983,427	-				+0.5
2,983,493	+				-0.3
2,983,493	+				-0.1
2,983,494	-				+0.9
2,983,494	-				-1.2
2,983,494	-				+1.8
2,983,505	-				-0.0
2,983,505	-				+0.5
2,983,505	-				+0.0
2,983,524	-				-3.1
2,983,524	-				+0.8
2,983,531	+				-1.7
2,983,531	+				-1.2
2,983,531	+				+0.8
2,983,531	+				-1.5
2,983,532	-				-0.9
2,983,738	-		PFR28_02510	0.60	-0.8
2,983,942	+		PFR28_02511	0.14	+0.9
2,983,942	+		PFR28_02511	0.14	-0.1
2,983,943	-		PFR28_02511	0.14	+0.6
2,983,943	-		PFR28_02511	0.14	-0.2
2,983,968	+		PFR28_02511	0.23	+1.3
2,983,969	-		PFR28_02511	0.24	+0.5
2,983,969	-		PFR28_02511	0.24	+0.4
2,984,015	+		PFR28_02511	0.40	+0.2
2,984,016	-		PFR28_02511	0.40	-0.7
2,984,184	+				-0.1
2,984,185	-				+0.5
2,984,185	-				-0.6
2,984,221	+				-0.6
2,984,221	+				-1.2
2,984,222	-				+1.2
2,984,222	-				+0.5
2,984,222	-				-0.0
2,984,415	+				+1.2
2,984,416	-				-2.1
2,984,660	-		PFR28_02512	0.18	-0.8
2,984,682	+		PFR28_02512	0.19	+0.9
2,984,806	+		PFR28_02512	0.25	-0.8
2,984,806	+		PFR28_02512	0.25	-1.7
2,984,806	+		PFR28_02512	0.25	-2.2
2,984,807	-		PFR28_02512	0.25	+0.8